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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3031 O_BomoASG12729_internal:A_BomoASG_c27802_g2_i1
123bp
 lisH_domain_and_HEAT_repeat-containing_protein_KIAA1468_[Bombyx_mori]
3032 O_BomoASG1272_5prime_partial:A_BomoASG_c7615_g1_i2
115bp
3033 O_BomoASG12730_internal:A_BomoASG_c27802_g2_i1
122bp
3034 O_BomoASG12731_internal:A_BomoASG_c27802_g1_i2
282bp
 lisH_domain_and_HEAT_repeat-containing_protein_KIAA1468_[Bombyx_mori]
3035 O_BomoASG12732_internal:A_BomoASG_c27803_g1_i1
125bp
 ribosome_biogenesis_protein_BOP1_homolog_[Bombyx_mori]
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030687 C preribosome, large subunit precursor
GO:0042254 P ribosome biogenesis
GO:0042273 P ribosomal large subunit biogenesis
GO:0043021 F ribonucleoprotein complex binding
3036 O_BomoASG12733_5prime_partial:A_BomoASG_c27803_g1_i1
118bp
3037 O_BomoASG12734_3prime_partial:A_BomoASG_c27803_g1_i1
99bp
3038 O_BomoASG12735_5prime_partial:A_BomoASG_c27803_g1_i2
222bp
 ribosome_biogenesis_protein_BOP1_homolog_[Bombyx_mori]
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030687 C preribosome, large subunit precursor
GO:0042254 P ribosome biogenesis
GO:0042273 P ribosomal large subunit biogenesis
GO:0043021 F ribonucleoprotein complex binding
3039 O_BomoASG12736_complete:A_BomoASG_c27803_g1_i2
167bp
3040 O_BomoASG12737_5prime_partial:A_BomoASG_c27803_g1_i2
138bp
3041 O_BomoASG12738_internal:A_BomoASG_c27803_g1_i3
266bp
 ribosome_biogenesis_protein_BOP1_homolog_[Bombyx_mori]
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030687 C preribosome, large subunit precursor
GO:0042254 P ribosome biogenesis
GO:0042273 P ribosomal large subunit biogenesis
GO:0043021 F ribonucleoprotein complex binding
3042 O_BomoASG12739_complete:A_BomoASG_c27803_g1_i3
189bp
3043 O_BomoASG1273_internal:A_BomoASG_c7642_g1_i1
106bp
 uncharacterized_protein_LOC101735522_isoform_X2_[Bombyx_mori]
3044 O_BomoASG12740_5prime_partial:A_BomoASG_c27803_g1_i3
138bp
3045 O_BomoASG12741_5prime_partial:A_BomoASG_c27803_g1_i3
118bp
3046 O_BomoASG12742_internal:A_BomoASG_c27804_g1_i1
143bp
 PREDICTED:_uncharacterized_protein_LOC108785946_[Nanorana_parkeri]
3047 O_BomoASG12743_3prime_partial:A_BomoASG_c27804_g1_i2
140bp
 PREDICTED:_uncharacterized_protein_LOC108785946_[Nanorana_parkeri]
3048 O_BomoASG12744_3prime_partial:A_BomoASG_c27804_g1_i4
140bp
 PREDICTED:_uncharacterized_protein_LOC108785946_[Nanorana_parkeri]
3049 O_BomoASG12745_complete:A_BomoASG_c27804_g1_i4
133bp
3050 O_BomoASG12746_complete:A_BomoASG_c27805_g1_i1
411bp
 serine_protease_HP21_precursor_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007311 P maternal specification of dorsal/ventral axis, oocyte, germ-line encoded
GO:0008063 P Toll signaling pathway
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009950 P dorsal/ventral axis specification
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
3051 O_BomoASG12747_complete:A_BomoASG_c27805_g1_i2
233bp
 serine_protease_HP21_precursor_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007311 P maternal specification of dorsal/ventral axis, oocyte, germ-line encoded
GO:0008063 P Toll signaling pathway
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009950 P dorsal/ventral axis specification
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
3052 O_BomoASG12748_3prime_partial:A_BomoASG_c27807_g1_i1
610bp
 protein_lap1_[Helicoverpa_armigera]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000902 P cell morphogenesis
GO:0001708 P cell fate specification
GO:0001737 P establishment of imaginal disc-derived wing hair orientation
GO:0001738 P morphogenesis of a polarized epithelium
GO:0005179 F hormone activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005918 C septate junction
GO:0005923 C bicellular tight junction
GO:0006963 P positive regulation of antibacterial peptide biosynthetic process
GO:0007275 P multicellular organism development
GO:0007280 P pole cell migration
GO:0007318 P pole plasm protein localization
GO:0007391 P dorsal closure
GO:0007399 P nervous system development
GO:0007464 P R3/R4 cell fate commitment
GO:0007472 P wing disc morphogenesis
GO:0007608 P sensory perception of smell
GO:0008105 P protein localization
GO:0008283 P cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0008406 P gonad development
GO:0008593 P regulation of Notch signaling pathway
GO:0016020 C membrane
GO:0016323 C basolateral plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016331 P morphogenesis of embryonic epithelium
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016333 P morphogenesis of follicular epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0016335 P morphogenesis of larval imaginal disc epithelium
GO:0016336 P establishment or maintenance of polarity of larval imaginal disc epithelium
GO:0019991 P septate junction assembly
GO:0030054 C cell junction
GO:0030100 P regulation of endocytosis
GO:0030154 P cell differentiation
GO:0030707 P ovarian follicle cell development
GO:0030714 P anterior/posterior axis specification, follicular epithelium
GO:0031594 C neuromuscular junction
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0042048 P olfactory behavior
GO:0042058 P regulation of epidermal growth factor receptor signaling pathway
GO:0042067 P establishment of ommatidial planar polarity
GO:0045169 C fusome
GO:0045186 P zonula adherens assembly
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045571 P negative regulation of imaginal disc growth
GO:0045823 P positive regulation of heart contraction
GO:0046425 P regulation of receptor signaling pathway via JAK-STAT
GO:0048749 P compound eye development
GO:0048863 P stem cell differentiation
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0050803 P regulation of synapse structure or activity
GO:0050896 P response to stimulus
GO:0051726 P regulation of cell cycle
GO:0060581 P cell fate commitment involved in pattern specification
GO:0072002 P Malpighian tubule development
GO:0072089 P stem cell proliferation
3053 O_BomoASG12749_5prime_partial:A_BomoASG_c27808_g2_i1
151bp
 vacuolar_protein_sorting-associated_protein_11_homolog_[Bombyx_mori]
3054 O_BomoASG1274_internal:A_BomoASG_c7643_g1_i1
131bp
 afadin_isoform_X2_[Bombyx_mori]
3055 O_BomoASG12750_internal:A_BomoASG_c27809_g1_i1
125bp
 dedicator_of_cytokinesis_protein_3_isoform_X2_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007264 P small GTPase mediated signal transduction
GO:0017124 F SH3 domain binding
GO:0043547 P positive regulation of GTPase activity
3056 O_BomoASG12751_5prime_partial:A_BomoASG_c27809_g1_i1
115bp
3057 O_BomoASG12752_internal:A_BomoASG_c27809_g1_i2
146bp
 dedicator_of_cytokinesis_protein_3_isoform_X2_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007264 P small GTPase mediated signal transduction
GO:0014911 P positive regulation of smooth muscle cell migration
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0030165 F PDZ domain binding
GO:0030971 F receptor tyrosine kinase binding
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0043547 P positive regulation of GTPase activity
GO:0048365 F small GTPase binding
GO:0060326 P cell chemotaxis
GO:1904694 P negative regulation of vascular associated smooth muscle contraction
3058 O_BomoASG12753_5prime_partial:A_BomoASG_c27809_g1_i2
115bp
3059 O_BomoASG12754_internal:A_BomoASG_c27809_g1_i3
391bp
 dedicator_of_cytokinesis_protein_3_isoform_X2_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007264 P small GTPase mediated signal transduction
GO:0017124 F SH3 domain binding
GO:0043547 P positive regulation of GTPase activity
3060 O_BomoASG12755_complete:A_BomoASG_c27809_g1_i3
207bp
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