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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2341 O_BomoASG12107_complete:A_BomoASG_c27409_g2_i2
425bp
 saccharopine_dehydrogenase-like_oxidoreductase_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0030496 C midbody
GO:0055114 P obsolete oxidation-reduction process
2342 O_BomoASG12108_complete:A_BomoASG_c27409_g2_i3
421bp
 saccharopine_dehydrogenase-like_oxidoreductase_isoform_X4_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0030496 C midbody
GO:0055114 P obsolete oxidation-reduction process
2343 O_BomoASG12109_5prime_partial:A_BomoASG_c27409_g2_i4
374bp
 saccharopine_dehydrogenase-like_oxidoreductase_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0030496 C midbody
GO:0055114 P obsolete oxidation-reduction process
2344 O_BomoASG1210_internal:A_BomoASG_c7241_g1_i1
159bp
 serine/threonine-protein_kinase_40_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003016 P respiratory system process
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005977 P glycogen metabolic process
GO:0006468 P protein phosphorylation
GO:0010468 P regulation of gene expression
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030324 P lung development
GO:0035264 P multicellular organism growth
GO:0043066 P negative regulation of apoptotic process
GO:0043408 P regulation of MAPK cascade
GO:0048286 P lung alveolus development
GO:0060425 P lung morphogenesis
2345 O_BomoASG12110_5prime_partial:A_BomoASG_c27409_g2_i5
400bp
 saccharopine_dehydrogenase-like_oxidoreductase_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0030496 C midbody
GO:0055114 P obsolete oxidation-reduction process
2346 O_BomoASG12111_5prime_partial:A_BomoASG_c27411_g1_i1
140bp
 DNA-directed_RNA_polymerase_III_subunit_RPC6_[Bombyx_mori]
GO:0001056 F RNA polymerase III activity
GO:0002376 P immune system process
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006359 P regulation of transcription by RNA polymerase III
GO:0006383 P transcription by RNA polymerase III
GO:0032728 P positive regulation of interferon-beta production
GO:0032774 P RNA biosynthetic process
GO:0045087 P innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0051607 P defense response to virus
2347 O_BomoASG12112_complete:A_BomoASG_c27411_g1_i2
294bp
 DNA-directed_RNA_polymerase_III_subunit_RPC6_[Bombyx_mori]
GO:0001056 F RNA polymerase III activity
GO:0002376 P immune system process
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006359 P regulation of transcription by RNA polymerase III
GO:0006383 P transcription by RNA polymerase III
GO:0032728 P positive regulation of interferon-beta production
GO:0032774 P RNA biosynthetic process
GO:0045087 P innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0051607 P defense response to virus
2348 O_BomoASG12113_internal:A_BomoASG_c27412_g1_i1
274bp
 PREDICTED:_uncharacterized_protein_LOC106129555_[Amyelois_transitella]
2349 O_BomoASG12114_complete:A_BomoASG_c27414_g1_i1
104bp
 PREDICTED:_uncharacterized_protein_LOC106134232_[Amyelois_transitella]
2350 O_BomoASG12115_internal:A_BomoASG_c27414_g2_i1
99bp
 polyprotein,_partial_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
2351 O_BomoASG12116_complete:A_BomoASG_c27415_g1_i1
1161bp
 manganese-transporting_ATPase_13A1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006812 P cation transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0019829 F ATPase-coupled cation transmembrane transporter activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0098655 P cation transmembrane transport
2352 O_BomoASG12117_complete:A_BomoASG_c27415_g1_i1
137bp
2353 O_BomoASG12118_5prime_partial:A_BomoASG_c27415_g1_i2
328bp
 manganese-transporting_ATPase_13A1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006812 P cation transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0019829 F ATPase-coupled cation transmembrane transporter activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0098655 P cation transmembrane transport
2354 O_BomoASG12119_5prime_partial:A_BomoASG_c27416_g1_i1
239bp
 general_transcription_factor_IIH_subunit_4_isoform_X3_[Bombyx_mori]
2355 O_BomoASG1211_5prime_partial:A_BomoASG_c7241_g1_i1
100bp
2356 O_BomoASG12120_complete:A_BomoASG_c27416_g1_i3
476bp
 general_transcription_factor_IIH_subunit_4_isoform_X2_[Bombyx_mori]
GO:0000439 C transcription factor TFIIH core complex
GO:0003690 F double-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004003 F DNA helicase activity
GO:0004672 F protein kinase activity
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006974 P cellular response to DNA damage stimulus
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0032508 P DNA duplex unwinding
GO:0070816 P phosphorylation of RNA polymerase II C-terminal domain
2357 O_BomoASG12121_complete:A_BomoASG_c27416_g1_i3
107bp
2358 O_BomoASG12122_3prime_partial:A_BomoASG_c27416_g1_i4
272bp
 general_transcription_factor_IIH_subunit_4_isoform_X2_[Bombyx_mori]
GO:0000439 C transcription factor TFIIH core complex
GO:0003690 F double-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004003 F DNA helicase activity
GO:0004672 F protein kinase activity
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006974 P cellular response to DNA damage stimulus
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0032508 P DNA duplex unwinding
GO:0070816 P phosphorylation of RNA polymerase II C-terminal domain
2359 O_BomoASG12123_complete:A_BomoASG_c27416_g1_i4
107bp
2360 O_BomoASG12124_internal:A_BomoASG_c27420_g1_i1
137bp
 rho_GTPase-activating_protein_21_[Bombyx_mori]
2361 O_BomoASG12125_internal:A_BomoASG_c27420_g1_i2
356bp
 rho_GTPase-activating_protein_21_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043547 P positive regulation of GTPase activity
2362 O_BomoASG12126_5prime_partial:A_BomoASG_c27421_g1_i1
114bp
2363 O_BomoASG12127_5prime_partial:A_BomoASG_c27423_g1_i1
105bp
 decaprenyl-diphosphate_synthase_subunit_2_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0006744 P ubiquinone biosynthetic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
2364 O_BomoASG12128_complete:A_BomoASG_c27423_g1_i2
402bp
 decaprenyl-diphosphate_synthase_subunit_2_[Bombyx_mori]
GO:0000010 F trans-hexaprenyltranstransferase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006744 P ubiquinone biosynthetic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016740 F transferase activity
GO:0046982 F protein heterodimerization activity
GO:0050347 F trans-octaprenyltranstransferase activity
GO:0050878 P regulation of body fluid levels
GO:0051290 P protein heterotetramerization
GO:1990234 C transferase complex
2365 O_BomoASG12129_internal:A_BomoASG_c27424_g1_i1
308bp
 peregrin,_partial_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0043966 P histone H3 acetylation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0070776 C MOZ/MORF histone acetyltransferase complex
GO:1901796 P regulation of signal transduction by p53 class mediator
2366 O_BomoASG1212_internal:A_BomoASG_c7252_g1_i1
160bp
 ras-related_protein_Rab-27A_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001750 C photoreceptor outer segment
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0006605 P protein targeting
GO:0006886 P intracellular protein transport
GO:0006887 P exocytosis
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0007596 P blood coagulation
GO:0008152 P metabolic process
GO:0010628 P positive regulation of gene expression
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0016324 C apical plasma membrane
GO:0019003 F GDP binding
GO:0019882 P antigen processing and presentation
GO:0019904 F protein domain specific binding
GO:0030141 C secretory granule
GO:0030318 P melanocyte differentiation
GO:0030425 C dendrite
GO:0030667 C secretory granule membrane
GO:0031489 F myosin V binding
GO:0032400 P melanosome localization
GO:0032402 P melanosome transport
GO:0032585 C multivesicular body membrane
GO:0033093 C Weibel-Palade body
GO:0036257 P multivesicular body organization
GO:0042470 C melanosome
GO:0043316 P cytotoxic T cell degranulation
GO:0043320 P natural killer cell degranulation
GO:0043473 P pigmentation
GO:0045921 P positive regulation of exocytosis
GO:0050766 P positive regulation of phagocytosis
GO:0051875 P pigment granule localization
GO:0051904 P pigment granule transport
GO:0070062 C extracellular exosome
GO:0070382 C exocytic vesicle
GO:0071985 P multivesicular body sorting pathway
GO:0097278 P complement-dependent cytotoxicity
GO:1903307 P positive regulation of regulated secretory pathway
GO:1903428 P positive regulation of reactive oxygen species biosynthetic process
GO:1903435 P positive regulation of constitutive secretory pathway
GO:1990182 P exosomal secretion
2367 O_BomoASG12130_internal:A_BomoASG_c27424_g1_i2
145bp
 peregrin,_partial_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0043966 P histone H3 acetylation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0070776 C MOZ/MORF histone acetyltransferase complex
GO:1901796 P regulation of signal transduction by p53 class mediator
2368 O_BomoASG12131_internal:A_BomoASG_c27425_g1_i1
651bp
 zinc_finger_FYVE_domain-containing_protein_26_homolog_[Bombyx_mori]
GO:0046872 F metal ion binding
2369 O_BomoASG12132_complete:A_BomoASG_c27425_g1_i1
128bp
2370 O_BomoASG12133_internal:A_BomoASG_c27425_g1_i2
542bp
 zinc_finger_FYVE_domain-containing_protein_26_homolog_[Bombyx_mori]
GO:0046872 F metal ion binding
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