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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2311 O_BomoASG12080_complete:A_BomoASG_c27395_g1_i1
106bp
 cysteine_dioxygenase_type_1_[Helicoverpa_armigera]
GO:0000097 P sulfur amino acid biosynthetic process
GO:0005506 F iron ion binding
GO:0005829 C cytosol
GO:0016491 F oxidoreductase activity
GO:0017172 F cysteine dioxygenase activity
GO:0019451 P L-cysteine catabolic process to pyruvate, using cysteine dioxygenase
GO:0042412 P taurine biosynthetic process
GO:0046439 P L-cysteine metabolic process
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
2312 O_BomoASG12081_complete:A_BomoASG_c27397_g1_i1
315bp
 R2D2_protein_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0019899 F enzyme binding
GO:0030422 P production of siRNA involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0034599 P cellular response to oxidative stress
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042473 P outer ear morphogenesis
GO:0042474 P middle ear morphogenesis
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048705 P skeletal system morphogenesis
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
2313 O_BomoASG12082_complete:A_BomoASG_c27397_g1_i1
171bp
2314 O_BomoASG12083_5prime_partial:A_BomoASG_c27397_g1_i1
135bp
 hypothetical_protein_AK812_SmicGene7015_[Symbiodinium_microadriaticum]
2315 O_BomoASG12084_complete:A_BomoASG_c27397_g1_i2
315bp
 R2D2_protein_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0019899 F enzyme binding
GO:0030422 P production of siRNA involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0034599 P cellular response to oxidative stress
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042473 P outer ear morphogenesis
GO:0042474 P middle ear morphogenesis
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048705 P skeletal system morphogenesis
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
2316 O_BomoASG12085_complete:A_BomoASG_c27397_g1_i2
171bp
2317 O_BomoASG12086_5prime_partial:A_BomoASG_c27397_g1_i2
135bp
 hypothetical_protein_AK812_SmicGene7015_[Symbiodinium_microadriaticum]
2318 O_BomoASG12087_complete:A_BomoASG_c27397_g1_i5
315bp
 R2D2_protein_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0019899 F enzyme binding
GO:0030422 P production of siRNA involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0034599 P cellular response to oxidative stress
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042473 P outer ear morphogenesis
GO:0042474 P middle ear morphogenesis
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048705 P skeletal system morphogenesis
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
2319 O_BomoASG12088_complete:A_BomoASG_c27397_g1_i5
171bp
2320 O_BomoASG12089_5prime_partial:A_BomoASG_c27397_g1_i5
135bp
 hypothetical_protein_AK812_SmicGene7015_[Symbiodinium_microadriaticum]
2321 O_BomoASG1208_5prime_partial:A_BomoASG_c7225_g1_i1
113bp
2322 O_BomoASG12090_complete:A_BomoASG_c27397_g1_i7
341bp
 R2D2_protein_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0019899 F enzyme binding
GO:0030422 P production of siRNA involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0034599 P cellular response to oxidative stress
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042473 P outer ear morphogenesis
GO:0042474 P middle ear morphogenesis
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048705 P skeletal system morphogenesis
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
2323 O_BomoASG12091_complete:A_BomoASG_c27397_g1_i7
171bp
2324 O_BomoASG12092_5prime_partial:A_BomoASG_c27397_g1_i7
138bp
 hypothetical_protein_AK812_SmicGene7015_[Symbiodinium_microadriaticum]
2325 O_BomoASG12093_complete:A_BomoASG_c27401_g1_i2
810bp
 pre-mRNA-processing_factor_40_homolog_A_isoform_X1_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0071004 C U2-type prespliceosome
2326 O_BomoASG12094_complete:A_BomoASG_c27401_g1_i2
102bp
2327 O_BomoASG12095_5prime_partial:A_BomoASG_c27401_g1_i3
333bp
 pre-mRNA-processing_factor_40_homolog_A_isoform_X2_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0071004 C U2-type prespliceosome
2328 O_BomoASG12096_complete:A_BomoASG_c27401_g1_i4
786bp
 pre-mRNA-processing_factor_40_homolog_A_isoform_X2_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0071004 C U2-type prespliceosome
2329 O_BomoASG12097_complete:A_BomoASG_c27401_g1_i4
102bp
2330 O_BomoASG12098_3prime_partial:A_BomoASG_c27404_g1_i1
120bp
2331 O_BomoASG12099_complete:A_BomoASG_c27404_g1_i2
328bp
 dual_specificity_protein_phosphatase_22_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000188 P obsolete inactivation of MAPK activity
GO:0002710 P negative regulation of T cell mediated immunity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0006915 P apoptotic process
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0008283 P cell population proliferation
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0046330 P positive regulation of JNK cascade
GO:0050860 P negative regulation of T cell receptor signaling pathway
GO:0050868 P negative regulation of T cell activation
2332 O_BomoASG1209_internal:A_BomoASG_c7240_g1_i1
133bp
 1-phosphatidylinositol-4,5-bisphosphate_phosphodiesterase_beta-4_[Bombyx_mori]
GO:0001580 P detection of chemical stimulus involved in sensory perception of bitter taste
GO:0002385 P mucosal immune response
GO:0004435 F phosphatidylinositol phospholipase C activity
GO:0004629 F phospholipase C activity
GO:0004871 F obsolete signal transducer activity
GO:0005096 F GTPase activator activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0006629 P lipid metabolic process
GO:0006644 P phospholipid metabolic process
GO:0006651 P diacylglycerol biosynthetic process
GO:0007165 P signal transduction
GO:0007601 P visual perception
GO:0007602 P phototransduction
GO:0007608 P sensory perception of smell
GO:0008081 F phosphoric diester hydrolase activity
GO:0008344 P adult locomotory behavior
GO:0008377 P light-induced release of internally sequestered calcium ion
GO:0008654 P phospholipid biosynthetic process
GO:0009649 P entrainment of circadian clock
GO:0016027 C inaD signaling complex
GO:0016028 C rhabdomere
GO:0016042 P lipid catabolic process
GO:0016056 P rhodopsin mediated signaling pathway
GO:0016059 P deactivation of rhodopsin mediated signaling
GO:0016787 F hydrolase activity
GO:0019722 P calcium-mediated signaling
GO:0035556 P intracellular signal transduction
GO:0043052 P thermotaxis
GO:0043153 P entrainment of circadian clock by photoperiod
GO:0043547 P positive regulation of GTPase activity
GO:0045494 P photoreceptor cell maintenance
GO:0046488 P phosphatidylinositol metabolic process
GO:0046673 P negative regulation of compound eye retinal cell programmed cell death
GO:0050896 P response to stimulus
GO:0051482 P positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway
GO:2000370 P positive regulation of clathrin-dependent endocytosis
2333 O_BomoASG120_5prime_partial:A_BomoASG_c725_g1_i1
122bp
2334 O_BomoASG12100_internal:A_BomoASG_c27404_g1_i3
121bp
2335 O_BomoASG12101_internal:A_BomoASG_c27405_g2_i1
202bp
 vacuolar_protein_sorting-associated_protein_33B-like,_partial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0006810 P transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0007275 P multicellular organism development
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0031902 C late endosome membrane
GO:0035622 P intrahepatic bile duct development
2336 O_BomoASG12102_internal:A_BomoASG_c27406_g1_i1
158bp
 uncharacterized_protein_LOC101745573_[Bombyx_mori]
2337 O_BomoASG12103_internal:A_BomoASG_c27406_g2_i1
355bp
 uncharacterized_protein_LOC101745573_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0006508 P proteolysis
GO:0016567 P protein ubiquitination
2338 O_BomoASG12104_internal:A_BomoASG_c27406_g1_i2
271bp
 uncharacterized_protein_LOC101745573_[Bombyx_mori]
2339 O_BomoASG12105_complete:A_BomoASG_c27408_g1_i1
220bp
 uncharacterized_protein_LOC101741561_[Bombyx_mori]
2340 O_BomoASG12106_5prime_partial:A_BomoASG_c27409_g2_i1
143bp
 saccharopine_dehydrogenase-like_oxidoreductase_isoform_X3_[Bombyx_mori]
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
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