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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2371 O_BomoASG12134_complete:A_BomoASG_c27425_g1_i2
128bp
2372 O_BomoASG12135_internal:A_BomoASG_c27425_g2_i1
363bp
 zinc_finger_FYVE_domain-containing_protein_26_homolog_[Bombyx_mori]
GO:0046872 F metal ion binding
2373 O_BomoASG12136_internal:A_BomoASG_c27425_g3_i1
183bp
 zinc_finger_FYVE_domain-containing_protein_26_homolog_[Bombyx_mori]
GO:0000724 P double-strand break repair via homologous recombination
GO:0000910 P cytokinesis
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008289 F lipid binding
GO:0030496 C midbody
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0046872 F metal ion binding
GO:0051301 P cell division
2374 O_BomoASG12137_3prime_partial:A_BomoASG_c27426_g1_i1
456bp
 PREDICTED:_pre-mRNA-splicing_factor_SYF1_[Amyelois_transitella]
GO:0000349 P generation of catalytic spliceosome for first transesterification step
GO:0000974 C Prp19 complex
GO:0001824 P blastocyst development
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0006974 P cellular response to DNA damage stimulus
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0021987 P cerebral cortex development
GO:0071010 C prespliceosome
GO:0071012 C catalytic step 1 spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0071014 C post-mRNA release spliceosomal complex
2375 O_BomoASG12138_3prime_partial:A_BomoASG_c27427_g1_i1
298bp
 Vacuolar_protein_sorting-associated_protein_13A_[Acromyrmex_echinatior]
2376 O_BomoASG12139_5prime_partial:A_BomoASG_c27427_g1_i1
289bp
2377 O_BomoASG1213_5prime_partial:A_BomoASG_c7252_g1_i1
130bp
2378 O_BomoASG12140_5prime_partial:A_BomoASG_c27427_g1_i1
258bp
 trithorax_group_protein_osa_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0014017 P neuroblast fate commitment
GO:0016055 P Wnt signaling pathway
GO:0016568 P chromatin organization
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0035060 C brahma complex
GO:0042058 P regulation of epidermal growth factor receptor signaling pathway
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046530 P photoreceptor cell differentiation
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0090544 C SWI/SNF superfamily-type complex
2379 O_BomoASG12141_3prime_partial:A_BomoASG_c27427_g1_i1
106bp
2380 O_BomoASG12142_complete:A_BomoASG_c27430_g1_i1
793bp
 armadillo_segment_polarity_protein_isoform_X2_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0001105 F transcription coactivator activity
GO:0001709 P cell fate determination
GO:0001745 P compound eye morphogenesis
GO:0003136 P negative regulation of heart induction by canonical Wnt signaling pathway
GO:0003713 F transcription coactivator activity
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005914 C spot adherens junction
GO:0005915 C zonula adherens
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007367 P segment polarity determination
GO:0007370 P ventral furrow formation
GO:0007391 P dorsal closure
GO:0007399 P nervous system development
GO:0007400 P neuroblast fate determination
GO:0007472 P wing disc morphogenesis
GO:0007507 P heart development
GO:0007616 P long-term memory
GO:0008092 F cytoskeletal protein binding
GO:0008134 F transcription factor binding
GO:0008360 P regulation of cell shape
GO:0014017 P neuroblast fate commitment
GO:0014019 P neuroblast development
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016337 P cell-cell adhesion
GO:0016342 C catenin complex
GO:0019900 F kinase binding
GO:0019903 F protein phosphatase binding
GO:0030054 C cell junction
GO:0030139 C endocytic vesicle
GO:0030424 C axon
GO:0030707 P ovarian follicle cell development
GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation
GO:0032403 F protein-containing complex binding
GO:0034333 P adherens junction assembly
GO:0035017 P cuticle pattern formation
GO:0035019 P somatic stem cell population maintenance
GO:0035147 P branch fusion, open tracheal system
GO:0035153 P epithelial cell type specification, open tracheal system
GO:0035293 P chitin-based larval cuticle pattern formation
GO:0045186 P zonula adherens assembly
GO:0045294 F alpha-catenin binding
GO:0045296 F cadherin binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046530 P photoreceptor cell differentiation
GO:0046667 P compound eye retinal cell programmed cell death
GO:0048477 P oogenesis
GO:0048526 P imaginal disc-derived wing expansion
GO:0048754 P branching morphogenesis of an epithelial tube
GO:0060232 P delamination
GO:0060429 P epithelium development
GO:0060914 P heart formation
GO:0071896 P protein localization to adherens junction
GO:0072659 P protein localization to plasma membrane
2381 O_BomoASG12143_complete:A_BomoASG_c27430_g1_i1
133bp
 hypothetical_protein_WN51_12917_[Melipona_quadrifasciata]
2382 O_BomoASG12144_complete:A_BomoASG_c27430_g1_i2
793bp
 armadillo_segment_polarity_protein_isoform_X2_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0001105 F transcription coactivator activity
GO:0001709 P cell fate determination
GO:0001745 P compound eye morphogenesis
GO:0003136 P negative regulation of heart induction by canonical Wnt signaling pathway
GO:0003713 F transcription coactivator activity
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005914 C spot adherens junction
GO:0005915 C zonula adherens
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007367 P segment polarity determination
GO:0007370 P ventral furrow formation
GO:0007391 P dorsal closure
GO:0007399 P nervous system development
GO:0007400 P neuroblast fate determination
GO:0007472 P wing disc morphogenesis
GO:0007507 P heart development
GO:0007616 P long-term memory
GO:0008092 F cytoskeletal protein binding
GO:0008134 F transcription factor binding
GO:0008360 P regulation of cell shape
GO:0014017 P neuroblast fate commitment
GO:0014019 P neuroblast development
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016337 P cell-cell adhesion
GO:0016342 C catenin complex
GO:0019900 F kinase binding
GO:0019903 F protein phosphatase binding
GO:0030054 C cell junction
GO:0030139 C endocytic vesicle
GO:0030424 C axon
GO:0030707 P ovarian follicle cell development
GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation
GO:0032403 F protein-containing complex binding
GO:0034333 P adherens junction assembly
GO:0035017 P cuticle pattern formation
GO:0035019 P somatic stem cell population maintenance
GO:0035147 P branch fusion, open tracheal system
GO:0035153 P epithelial cell type specification, open tracheal system
GO:0035293 P chitin-based larval cuticle pattern formation
GO:0045186 P zonula adherens assembly
GO:0045294 F alpha-catenin binding
GO:0045296 F cadherin binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046530 P photoreceptor cell differentiation
GO:0046667 P compound eye retinal cell programmed cell death
GO:0048477 P oogenesis
GO:0048526 P imaginal disc-derived wing expansion
GO:0048754 P branching morphogenesis of an epithelial tube
GO:0060232 P delamination
GO:0060429 P epithelium development
GO:0060914 P heart formation
GO:0071896 P protein localization to adherens junction
GO:0072659 P protein localization to plasma membrane
2383 O_BomoASG12145_complete:A_BomoASG_c27430_g1_i2
133bp
 hypothetical_protein_WN51_12917_[Melipona_quadrifasciata]
2384 O_BomoASG12146_5prime_partial:A_BomoASG_c27432_g1_i1
245bp
 uncharacterized_protein_LOC101743848_[Bombyx_mori]
GO:0004033 F aldo-keto reductase (NADP) activity
GO:0008106 F alcohol dehydrogenase (NADP+) activity
GO:0009409 P response to cold
GO:0009414 P response to water deprivation
GO:0009507 C chloroplast
GO:0009636 P response to toxic substance
GO:0009651 P response to salt stress
GO:0016229 F steroid dehydrogenase activity
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070401 F NADP+ binding
2385 O_BomoASG12147_internal:A_BomoASG_c27433_g1_i1
217bp
 protein_unc-119_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0007399 P nervous system development
GO:0008289 F lipid binding
GO:0015031 P protein transport
2386 O_BomoASG12148_3prime_partial:A_BomoASG_c27433_g1_i2
194bp
 protein_unc-119_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0007399 P nervous system development
GO:0008289 F lipid binding
GO:0015031 P protein transport
2387 O_BomoASG12149_3prime_partial:A_BomoASG_c27434_g1_i1
200bp
 histone-lysine_N-methyltransferase,_H3_lysine-79_specific_isoform_X6_[Bombyx_mori]
GO:0000781 C chromosome, telomeric region
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006348 P subtelomeric heterochromatin assembly
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030702 P pericentric heterochromatin assembly
GO:0031151 F histone methyltransferase activity (H3-K79 specific)
GO:0032259 P methylation
GO:0034729 P histone H3-K79 methylation
GO:0035097 C histone methyltransferase complex
GO:0046331 P lateral inhibition
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0051726 P regulation of cell cycle
GO:2000637 P positive regulation of gene silencing by miRNA
2388 O_BomoASG1214_internal:A_BomoASG_c7256_g1_i1
106bp
 PREDICTED:_craniofacial_development_protein_2-like_[Amyelois_transitella]
2389 O_BomoASG12150_3prime_partial:A_BomoASG_c27434_g1_i2
309bp
 histone-lysine_N-methyltransferase,_H3_lysine-79_specific_isoform_X6_[Bombyx_mori]
GO:0000781 C chromosome, telomeric region
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006348 P subtelomeric heterochromatin assembly
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030702 P pericentric heterochromatin assembly
GO:0031151 F histone methyltransferase activity (H3-K79 specific)
GO:0032259 P methylation
GO:0034729 P histone H3-K79 methylation
GO:0035097 C histone methyltransferase complex
GO:0046331 P lateral inhibition
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0051726 P regulation of cell cycle
GO:2000637 P positive regulation of gene silencing by miRNA
2390 O_BomoASG12151_internal:A_BomoASG_c27434_g1_i3
149bp
 histone-lysine_N-methyltransferase,_H3_lysine-79_specific_isoform_X6_[Bombyx_mori]
GO:0000781 C chromosome, telomeric region
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006348 P subtelomeric heterochromatin assembly
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030702 P pericentric heterochromatin assembly
GO:0031151 F histone methyltransferase activity (H3-K79 specific)
GO:0032259 P methylation
GO:0034729 P histone H3-K79 methylation
GO:0035097 C histone methyltransferase complex
GO:0046331 P lateral inhibition
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0051726 P regulation of cell cycle
GO:2000637 P positive regulation of gene silencing by miRNA
2391 O_BomoASG12152_internal:A_BomoASG_c27434_g1_i4
448bp
 histone-lysine_N-methyltransferase,_H3_lysine-79_specific_isoform_X6_[Bombyx_mori]
GO:0000781 C chromosome, telomeric region
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006348 P subtelomeric heterochromatin assembly
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030702 P pericentric heterochromatin assembly
GO:0031151 F histone methyltransferase activity (H3-K79 specific)
GO:0032259 P methylation
GO:0034729 P histone H3-K79 methylation
GO:0035097 C histone methyltransferase complex
GO:0046331 P lateral inhibition
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0051726 P regulation of cell cycle
GO:2000637 P positive regulation of gene silencing by miRNA
2392 O_BomoASG12153_5prime_partial:A_BomoASG_c27435_g1_i1
178bp
 calcium_load-activated_calcium_channel_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2393 O_BomoASG12154_complete:A_BomoASG_c27435_g1_i2
184bp
 calcium_load-activated_calcium_channel_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2394 O_BomoASG12155_3prime_partial:A_BomoASG_c27436_g1_i1
427bp
 putative_DNA_helicase_Ino80_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0000166 F nucleotide binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003779 F actin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005874 C microtubule
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006310 P DNA recombination
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0010571 P positive regulation of nuclear cell cycle DNA replication
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030307 P positive regulation of cell growth
GO:0031011 C Ino80 complex
GO:0032508 P DNA duplex unwinding
GO:0034644 P cellular response to UV
GO:0043014 F alpha-tubulin binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0070914 P UV-damage excision repair
GO:0071479 P cellular response to ionizing radiation
GO:2000045 P regulation of G1/S transition of mitotic cell cycle
2395 O_BomoASG12156_5prime_partial:A_BomoASG_c27436_g1_i1
132bp
2396 O_BomoASG12157_3prime_partial:A_BomoASG_c27436_g1_i2
427bp
 putative_DNA_helicase_Ino80_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0000166 F nucleotide binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003779 F actin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005874 C microtubule
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006310 P DNA recombination
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0010571 P positive regulation of nuclear cell cycle DNA replication
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030307 P positive regulation of cell growth
GO:0031011 C Ino80 complex
GO:0032508 P DNA duplex unwinding
GO:0034644 P cellular response to UV
GO:0043014 F alpha-tubulin binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0070914 P UV-damage excision repair
GO:0071479 P cellular response to ionizing radiation
GO:2000045 P regulation of G1/S transition of mitotic cell cycle
2397 O_BomoASG12158_5prime_partial:A_BomoASG_c27436_g1_i2
132bp
2398 O_BomoASG12159_internal:A_BomoASG_c27436_g1_i3
111bp
 putative_DNA_helicase_Ino80_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000790 C chromatin
GO:0000975 F transcription cis-regulatory region binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031011 C Ino80 complex
GO:0032508 P DNA duplex unwinding
GO:0040034 P regulation of development, heterochronic
GO:0045892 P negative regulation of transcription, DNA-templated
2399 O_BomoASG1215_internal:A_BomoASG_c7261_g1_i1
187bp
 uncharacterized_protein_LOC105841651_isoform_X4_[Bombyx_mori]
2400 O_BomoASG12160_internal:A_BomoASG_c27436_g1_i3
111bp
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