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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
211 O_BomoASG10190_complete:A_BomoASG_c26132_g1_i1
449bp
 NEDD8-activating_enzyme_E1_catalytic_subunit_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0008641 F ubiquitin-like modifier activating enzyme activity
GO:0016874 F ligase activity
GO:0016881 F acid-amino acid ligase activity
GO:0019781 F NEDD8 activating enzyme activity
GO:0045116 P protein neddylation
212 O_BomoASG10191_complete:A_BomoASG_c26132_g1_i2
449bp
 NEDD8-activating_enzyme_E1_catalytic_subunit_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0008641 F ubiquitin-like modifier activating enzyme activity
GO:0016874 F ligase activity
GO:0016881 F acid-amino acid ligase activity
GO:0019781 F NEDD8 activating enzyme activity
GO:0045116 P protein neddylation
213 O_BomoASG10192_complete:A_BomoASG_c26132_g1_i3
133bp
 NEDD8-activating_enzyme_E1_catalytic_subunit_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0008641 F ubiquitin-like modifier activating enzyme activity
GO:0016874 F ligase activity
GO:0016881 F acid-amino acid ligase activity
GO:0019781 F NEDD8 activating enzyme activity
GO:0045116 P protein neddylation
214 O_BomoASG10193_complete:A_BomoASG_c26133_g1_i1
1121bp
 ubiquitin_carboxyl-terminal_hydrolase_7_isoform_X2_[Bombyx_mori]
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010216 P maintenance of DNA methylation
GO:0016579 P protein deubiquitination
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0031647 P regulation of protein stability
GO:0036459 F thiol-dependent deubiquitinase
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0051090 P regulation of DNA-binding transcription factor activity
215 O_BomoASG10194_complete:A_BomoASG_c26133_g1_i2
1117bp
 ubiquitin_carboxyl-terminal_hydrolase_7_isoform_X2_[Bombyx_mori]
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010216 P maintenance of DNA methylation
GO:0016579 P protein deubiquitination
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0031647 P regulation of protein stability
GO:0036459 F thiol-dependent deubiquitinase
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0051090 P regulation of DNA-binding transcription factor activity
216 O_BomoASG10195_complete:A_BomoASG_c26133_g1_i3
1116bp
 ubiquitin_carboxyl-terminal_hydrolase_7_isoform_X5_[Bombyx_mori]
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010216 P maintenance of DNA methylation
GO:0016579 P protein deubiquitination
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0031647 P regulation of protein stability
GO:0036459 F thiol-dependent deubiquitinase
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0051090 P regulation of DNA-binding transcription factor activity
217 O_BomoASG10196_5prime_partial:A_BomoASG_c26134_g1_i1
137bp
 HEAT_repeat-containing_protein_5B,_partial_[Helicoverpa_armigera]
218 O_BomoASG10197_internal:A_BomoASG_c26136_g1_i1
246bp
 zinc_finger_protein_hangover_isoform_X1_[Bombyx_mori]
219 O_BomoASG10198_5prime_partial:A_BomoASG_c26136_g1_i1
152bp
220 O_BomoASG10199_internal:A_BomoASG_c26136_g2_i1
288bp
 zinc_finger_protein_hangover_isoform_X1_[Bombyx_mori]
221 O_BomoASG1019_complete:A_BomoASG_c6403_g1_i1
195bp
 ribosomal_protein_S9_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0000228 C nuclear chromosome
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005840 C ribosome
GO:0006412 P translation
GO:0007052 P mitotic spindle organization
GO:0015935 C small ribosomal subunit
GO:0019843 F rRNA binding
GO:0022627 C cytosolic small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0045903 P positive regulation of translational fidelity
222 O_BomoASG101_5prime_partial:A_BomoASG_c570_g1_i1
141bp
 conserved_Plasmodium_protein,_unknown_function_[Plasmodium_malariae]
223 O_BomoASG10200_complete:A_BomoASG_c26136_g2_i1
151bp
224 O_BomoASG10201_complete:A_BomoASG_c26136_g2_i1
128bp
225 O_BomoASG10202_complete:A_BomoASG_c26137_g1_i1
931bp
 F-box_only_protein_11_isoform_X2_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006464 P cellular protein modification process
GO:0007605 P sensory perception of sound
GO:0008270 F zinc ion binding
GO:0016274 F protein-arginine N-methyltransferase activity
GO:0016567 P protein ubiquitination
GO:0035246 P peptidyl-arginine N-methylation
GO:0046872 F metal ion binding
226 O_BomoASG10203_complete:A_BomoASG_c26137_g1_i2
942bp
 F-box_only_protein_11_isoform_X1_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006464 P cellular protein modification process
GO:0007605 P sensory perception of sound
GO:0008270 F zinc ion binding
GO:0016274 F protein-arginine N-methyltransferase activity
GO:0016567 P protein ubiquitination
GO:0035246 P peptidyl-arginine N-methylation
GO:0046872 F metal ion binding
227 O_BomoASG10204_5prime_partial:A_BomoASG_c26139_g1_i1
395bp
 histone_demethylase_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016577 P histone demethylation
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0032453 F histone H3-methyl-lysine-4 demethylase activity
GO:0032922 P circadian regulation of gene expression
GO:0034647 F histone H3-tri/di/monomethyl-lysine-4 demethylase activity
GO:0034720 P histone H3-K4 demethylation
GO:0034721 P histone H3-K4 demethylation, trimethyl-H3-K4-specific
GO:0043970 P histone H3-K9 acetylation
GO:0043992 F histone acetyltransferase activity (H3-K9 specific)
GO:0045475 P locomotor rhythm
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070822 C Sin3-type complex
228 O_BomoASG10205_internal:A_BomoASG_c26140_g1_i1
142bp
 non-canonical_poly(A)_RNA_polymerase_protein_Trf4-1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0004652 F polynucleotide adenylyltransferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0042493 P response to xenobiotic stimulus
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
229 O_BomoASG10206_internal:A_BomoASG_c26140_g1_i1
142bp
230 O_BomoASG10207_3prime_partial:A_BomoASG_c26140_g2_i1
281bp
 non-canonical_poly(A)_RNA_polymerase_protein_Trf4-1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0004652 F polynucleotide adenylyltransferase activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0071044 P histone mRNA catabolic process
GO:0071897 P DNA biosynthetic process
231 O_BomoASG10208_5prime_partial:A_BomoASG_c26140_g2_i1
108bp
232 O_BomoASG10209_5prime_partial:A_BomoASG_c26140_g2_i1
103bp
233 O_BomoASG1020_internal:A_BomoASG_c6414_g1_i1
165bp
 zinc_finger_FYVE_domain-containing_protein_26_homolog_[Bombyx_mori]
234 O_BomoASG10210_5prime_partial:A_BomoASG_c26143_g1_i1
169bp
 checkpoint_protein_HUS1_isoform_X3_[Bombyx_mori]
GO:0000077 P DNA damage checkpoint signaling
GO:0000724 P double-strand break repair via homologous recombination
GO:0001932 P regulation of protein phosphorylation
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0008156 P negative regulation of DNA replication
GO:0009411 P response to UV
GO:0009790 P embryo development
GO:0030896 C checkpoint clamp complex
GO:0031573 P mitotic intra-S DNA damage checkpoint signaling
GO:0033314 P mitotic DNA replication checkpoint signaling
GO:0035861 C site of double-strand break
GO:0044778 P meiotic DNA integrity checkpoint signaling
GO:0071479 P cellular response to ionizing radiation
235 O_BomoASG10211_5prime_partial:A_BomoASG_c26143_g1_i2
148bp
 checkpoint_protein_HUS1_isoform_X3_[Bombyx_mori]
GO:0000077 P DNA damage checkpoint signaling
GO:0000724 P double-strand break repair via homologous recombination
GO:0001932 P regulation of protein phosphorylation
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0008156 P negative regulation of DNA replication
GO:0009411 P response to UV
GO:0009790 P embryo development
GO:0030896 C checkpoint clamp complex
GO:0031573 P mitotic intra-S DNA damage checkpoint signaling
GO:0033314 P mitotic DNA replication checkpoint signaling
GO:0035861 C site of double-strand break
GO:0044778 P meiotic DNA integrity checkpoint signaling
GO:0071479 P cellular response to ionizing radiation
236 O_BomoASG10212_5prime_partial:A_BomoASG_c26143_g1_i3
298bp
 checkpoint_protein_HUS1_isoform_X1_[Bombyx_mori]
GO:0000077 P DNA damage checkpoint signaling
GO:0000724 P double-strand break repair via homologous recombination
GO:0001932 P regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0008156 P negative regulation of DNA replication
GO:0009411 P response to UV
GO:0009790 P embryo development
GO:0030896 C checkpoint clamp complex
GO:0031573 P mitotic intra-S DNA damage checkpoint signaling
GO:0033314 P mitotic DNA replication checkpoint signaling
GO:0035861 C site of double-strand break
GO:0044778 P meiotic DNA integrity checkpoint signaling
GO:0071479 P cellular response to ionizing radiation
GO:1901796 P regulation of signal transduction by p53 class mediator
237 O_BomoASG10213_5prime_partial:A_BomoASG_c26144_g1_i1
133bp
 methyltransferase-like_protein_6_[Helicoverpa_armigera]
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
238 O_BomoASG10214_5prime_partial:A_BomoASG_c26145_g1_i1
112bp
239 O_BomoASG10215_5prime_partial:A_BomoASG_c26145_g1_i3
112bp
240 O_BomoASG10216_internal:A_BomoASG_c26147_g1_i1
132bp
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