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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
241 O_BomoASG10217_internal:A_BomoASG_c26147_g1_i1
132bp
 Neuropathy_target_esterase_sws_[Papilio_xuthus]
GO:0004622 F lysophospholipase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006643 P membrane lipid metabolic process
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0034349 P glial cell apoptotic process
GO:0046470 P phosphatidylcholine metabolic process
GO:0051402 P neuron apoptotic process
GO:0061024 P membrane organization
242 O_BomoASG10218_internal:A_BomoASG_c26147_g1_i2
297bp
 neuropathy_target_esterase_sws_isoform_X4_[Bombyx_mori]
GO:0004622 F lysophospholipase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006643 P membrane lipid metabolic process
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0034349 P glial cell apoptotic process
GO:0046470 P phosphatidylcholine metabolic process
GO:0051402 P neuron apoptotic process
GO:0061024 P membrane organization
243 O_BomoASG10219_internal:A_BomoASG_c26149_g1_i1
261bp
 reverse_transcriptase_[Lasius_niger]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
244 O_BomoASG1021_3prime_partial:A_BomoASG_c6418_g1_i1
401bp
 general_transcription_factor_IIF_subunit_1_isoform_X1_[Bombyx_mori]
GO:0001096 F TFIIF-class transcription factor complex binding
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005674 C transcription factor TFIIF complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
245 O_BomoASG10220_3prime_partial:A_BomoASG_c26149_g2_i1
219bp
 reverse_transcriptase_[Lasius_niger]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
246 O_BomoASG10221_5prime_partial:A_BomoASG_c26149_g2_i1
112bp
247 O_BomoASG10222_internal:A_BomoASG_c26151_g1_i1
168bp
 enzymatic_polyprotein,_putative_[Pediculus_humanus_corporis]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
248 O_BomoASG10223_complete:A_BomoASG_c26151_g1_i1
101bp
 hypothetical_protein_FF38_09101_[Lucilia_cuprina]
249 O_BomoASG10224_3prime_partial:A_BomoASG_c26151_g1_i2
260bp
 uncharacterized_protein_LOC101738890_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
250 O_BomoASG10225_complete:A_BomoASG_c26151_g1_i2
101bp
 hypothetical_protein_FF38_09101_[Lucilia_cuprina]
251 O_BomoASG10226_complete:A_BomoASG_c26152_g1_i1
621bp
 ATP-dependent_RNA_helicase_abstrakt_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006915 P apoptotic process
GO:0007399 P nervous system development
GO:0008270 F zinc ion binding
GO:0009653 P anatomical structure morphogenesis
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0030010 P establishment of cell polarity
GO:0046872 F metal ion binding
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
252 O_BomoASG10227_complete:A_BomoASG_c26152_g1_i1
162bp
 hypothetical_protein_COLO4_00638_[Corchorus_olitorius]
253 O_BomoASG10228_complete:A_BomoASG_c26152_g1_i1
123bp
254 O_BomoASG10229_3prime_partial:A_BomoASG_c26154_g1_i2
120bp
 craniofacial_development_protein_2_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
255 O_BomoASG1022_5prime_partial:A_BomoASG_c6418_g1_i1
220bp
256 O_BomoASG10230_3prime_partial:A_BomoASG_c26154_g1_i3
120bp
 craniofacial_development_protein_2_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
257 O_BomoASG10231_3prime_partial:A_BomoASG_c26155_g1_i1
309bp
 transmembrane_and_coiled-coil_domains_protein_2_isoform_X7_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
258 O_BomoASG10232_complete:A_BomoASG_c26155_g1_i1
137bp
259 O_BomoASG10233_internal:A_BomoASG_c26159_g1_i2
216bp
 reverse_transcriptase_-_silkworm_transposon_Pao
260 O_BomoASG10234_5prime_partial:A_BomoASG_c26160_g1_i1
293bp
 uncharacterized_protein_LOC101739386_[Bombyx_mori]
261 O_BomoASG10235_internal:A_BomoASG_c26164_g1_i1
369bp
 condensin_complex_subunit_3_isoform_X2_[Bombyx_mori]
GO:0000796 C condensin complex
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0030261 P chromosome condensation
GO:0051301 P cell division
262 O_BomoASG10236_5prime_partial:A_BomoASG_c26165_g1_i1
223bp
 hypothetical_protein_ALC57_07897_[Trachymyrmex_cornetzi]
263 O_BomoASG10237_3prime_partial:A_BomoASG_c26165_g1_i1
122bp
 PREDICTED:_uncharacterized_protein_LOC105556339,_partial_[Vollenhovia_emeryi]
264 O_BomoASG10238_internal:A_BomoASG_c26165_g1_i2
418bp
 PREDICTED:_uncharacterized_protein_LOC105556339,_partial_[Vollenhovia_emeryi]
265 O_BomoASG10239_5prime_partial:A_BomoASG_c26165_g1_i3
488bp
 PREDICTED:_uncharacterized_protein_LOC105556339,_partial_[Vollenhovia_emeryi]
266 O_BomoASG1023_5prime_partial:A_BomoASG_c6418_g1_i1
111bp
267 O_BomoASG10240_internal:A_BomoASG_c26165_g1_i4
207bp
 hypothetical_protein_ALC57_07897_[Trachymyrmex_cornetzi]
268 O_BomoASG10241_internal:A_BomoASG_c26165_g1_i5
443bp
 PREDICTED:_uncharacterized_protein_LOC105556339,_partial_[Vollenhovia_emeryi]
269 O_BomoASG10242_3prime_partial:A_BomoASG_c26166_g1_i1
125bp
 uncharacterized_protein_LOC101744084_isoform_X2_[Bombyx_mori]
270 O_BomoASG10243_internal:A_BomoASG_c26166_g1_i2
107bp
 uncharacterized_protein_LOC101744084_isoform_X2_[Bombyx_mori]
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