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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1951 O_BomoASG11757_5prime_partial:A_BomoASG_c27199_g1_i1
163bp
 hypothetical_protein,_variant_1_[Aphanomyces_astaci]
1952 O_BomoASG11758_complete:A_BomoASG_c27200_g2_i1
415bp
 solute_carrier_family_52,_riboflavin_transporter,_member_3_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006771 P riboflavin metabolic process
GO:0006810 P transport
GO:0007605 P sensory perception of sound
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0032217 F riboflavin transmembrane transporter activity
GO:0032218 P riboflavin transport
GO:0034605 P cellular response to heat
1953 O_BomoASG11759_complete:A_BomoASG_c27200_g2_i2
441bp
 solute_carrier_family_52,_riboflavin_transporter,_member_3_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006771 P riboflavin metabolic process
GO:0006810 P transport
GO:0007605 P sensory perception of sound
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0032217 F riboflavin transmembrane transporter activity
GO:0032218 P riboflavin transport
GO:0034605 P cellular response to heat
1954 O_BomoASG1175_internal:A_BomoASG_c6952_g1_i1
113bp
 uncharacterized_protein_LOC101742438_[Bombyx_mori]
1955 O_BomoASG11760_complete:A_BomoASG_c27200_g2_i3
415bp
 solute_carrier_family_52,_riboflavin_transporter,_member_3_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006771 P riboflavin metabolic process
GO:0006810 P transport
GO:0007605 P sensory perception of sound
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0032217 F riboflavin transmembrane transporter activity
GO:0032218 P riboflavin transport
GO:0034605 P cellular response to heat
1956 O_BomoASG11761_internal:A_BomoASG_c27202_g1_i1
427bp
 uncharacterized_protein_LOC101743023_[Bombyx_mori]
1957 O_BomoASG11762_5prime_partial:A_BomoASG_c27206_g1_i1
150bp
1958 O_BomoASG11763_5prime_partial:A_BomoASG_c27206_g1_i1
144bp
 E3_ubiquitin-protein_ligase_SMURF2_isoform_X2_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006464 P cellular protein modification process
GO:0007398 P ectoderm development
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030154 P cell differentiation
GO:0030509 P BMP signaling pathway
GO:0030514 P negative regulation of BMP signaling pathway
GO:0042787 P ubiquitin-dependent protein catabolic process
1959 O_BomoASG11764_5prime_partial:A_BomoASG_c27206_g1_i1
130bp
1960 O_BomoASG11765_internal:A_BomoASG_c27208_g1_i1
627bp
 dystrophin,_isoforms_A/C/F/G/H-like,_partial_[Bombyx_mori]
GO:0002162 F dystroglycan binding
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016203 P muscle attachment
GO:0030054 C cell junction
GO:0042383 C sarcolemma
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046872 F metal ion binding
1961 O_BomoASG11766_complete:A_BomoASG_c27208_g1_i1
297bp
1962 O_BomoASG11767_3prime_partial:A_BomoASG_c27208_g1_i1
166bp
1963 O_BomoASG11768_5prime_partial:A_BomoASG_c27208_g1_i1
114bp
1964 O_BomoASG11769_complete:A_BomoASG_c27210_g1_i1
376bp
 snurportin-1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0008565 F obsolete protein transporter activity
GO:0061015 P snRNA import into nucleus
GO:0070062 C extracellular exosome
1965 O_BomoASG1176_complete:A_BomoASG_c6992_g1_i1
441bp
 uncharacterized_protein_LOC101738706_isoform_X2_[Bombyx_mori]
GO:0000003 P reproduction
GO:0001764 P neuron migration
GO:0005604 C basement membrane
GO:0007155 P cell adhesion
GO:0007414 P axonal defasciculation
GO:0009408 P response to heat
GO:0010950 P positive regulation of endopeptidase activity
GO:0016477 P cell migration
GO:0040017 P positive regulation of locomotion
GO:0042127 P regulation of cell population proliferation
GO:0051788 P response to misfolded protein
GO:0071711 P basement membrane organization
1966 O_BomoASG11770_3prime_partial:A_BomoASG_c27211_g1_i2
288bp
 uncharacterized_protein_LOC101737353_[Bombyx_mori]
1967 O_BomoASG11771_internal:A_BomoASG_c27212_g1_i1
301bp
 TBC1_domain_family_member_1_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006886 P intracellular protein transport
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0090630 P activation of GTPase activity
1968 O_BomoASG11772_5prime_partial:A_BomoASG_c27212_g1_i2
709bp
 TBC1_domain_family_member_1_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006886 P intracellular protein transport
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0032880 P regulation of protein localization
GO:0061024 P membrane organization
GO:0090630 P activation of GTPase activity
1969 O_BomoASG11773_complete:A_BomoASG_c27212_g1_i2
127bp
1970 O_BomoASG11774_5prime_partial:A_BomoASG_c27212_g1_i3
358bp
 TBC1_domain_family_member_1_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006886 P intracellular protein transport
GO:0012505 C endomembrane system
GO:0016192 P vesicle-mediated transport
GO:0017137 F small GTPase binding
GO:0030659 C cytoplasmic vesicle membrane
GO:0031338 P regulation of vesicle fusion
GO:0032869 P cellular response to insulin stimulus
GO:0061024 P membrane organization
GO:0070062 C extracellular exosome
GO:0090630 P activation of GTPase activity
1971 O_BomoASG11775_complete:A_BomoASG_c27212_g1_i3
127bp
1972 O_BomoASG11776_internal:A_BomoASG_c27213_g1_i1
607bp
 histone_acetyltransferase_KAT6A_isoform_X1_[Bombyx_mori]
1973 O_BomoASG11777_5prime_partial:A_BomoASG_c27213_g1_i1
465bp
1974 O_BomoASG11778_complete:A_BomoASG_c27213_g1_i1
135bp
1975 O_BomoASG11779_5prime_partial:A_BomoASG_c27214_g1_i1
275bp
 uncharacterized_protein_LOC110376212_[Helicoverpa_armigera]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007416 P synapse assembly
GO:0007611 P learning or memory
GO:0007613 P memory
GO:0007616 P long-term memory
GO:0008345 P larval locomotory behavior
GO:0008355 P olfactory learning
GO:0040011 P locomotion
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048813 P dendrite morphogenesis
GO:0050773 P regulation of dendrite development
1976 O_BomoASG1177_internal:A_BomoASG_c6994_g1_i1
99bp
1977 O_BomoASG11780_complete:A_BomoASG_c27214_g2_i2
395bp
 ARP6_actin-related_protein_6-like_protein_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006338 P chromatin remodeling
1978 O_BomoASG11781_complete:A_BomoASG_c27214_g2_i3
395bp
 ARP6_actin-related_protein_6-like_protein_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006338 P chromatin remodeling
1979 O_BomoASG11782_complete:A_BomoASG_c27215_g1_i1
305bp
 protein_phosphatase_PTC7_homolog_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0005575 C cellular_component
GO:0006470 P protein dephosphorylation
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1980 O_BomoASG11783_complete:A_BomoASG_c27216_g1_i1
254bp
 elongator_complex_protein_5_[Bombyx_mori]
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