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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1921 O_BomoASG1172_internal:A_BomoASG_c6900_g1_i1
99bp
 protein_pangolin,_isoforms_A/H/I/S_isoform_X7_[Helicoverpa_armigera]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005875 C microtubule associated complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0007435 P salivary gland morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007500 P mesodermal cell fate determination
GO:0007507 P heart development
GO:0008013 F beta-catenin binding
GO:0009880 P embryonic pattern specification
GO:0010628 P positive regulation of gene expression
GO:0016055 P Wnt signaling pathway
GO:0019900 F kinase binding
GO:0030111 P regulation of Wnt signaling pathway
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045610 P regulation of hemocyte differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0060070 P canonical Wnt signaling pathway
GO:0070491 F DNA-binding transcription factor binding
GO:0072091 P regulation of stem cell proliferation
1922 O_BomoASG11730_complete:A_BomoASG_c27173_g1_i2
1039bp
 valine--tRNA_ligase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004832 F valine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006438 P valyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
1923 O_BomoASG11731_complete:A_BomoASG_c27173_g1_i2
140bp
1924 O_BomoASG11732_complete:A_BomoASG_c27173_g1_i2
114bp
1925 O_BomoASG11733_internal:A_BomoASG_c27175_g1_i1
141bp
 transmembrane_protein_94_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005654 C nucleoplasm
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1926 O_BomoASG11734_internal:A_BomoASG_c27175_g1_i2
358bp
 transmembrane_protein_94_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1927 O_BomoASG11735_complete:A_BomoASG_c27175_g1_i2
117bp
1928 O_BomoASG11736_3prime_partial:A_BomoASG_c27177_g1_i1
297bp
 peroxisomal_leader_peptide-processing_protease_[Bombyx_mori]
GO:0002020 F protease binding
GO:0004252 F serine-type endopeptidase activity
GO:0005777 C peroxisome
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0031998 P regulation of fatty acid beta-oxidation
GO:0042802 F identical protein binding
GO:0051260 P protein homooligomerization
1929 O_BomoASG11737_5prime_partial:A_BomoASG_c27177_g1_i1
157bp
1930 O_BomoASG11738_complete:A_BomoASG_c27177_g1_i1
148bp
1931 O_BomoASG11739_complete:A_BomoASG_c27178_g1_i1
398bp
 thioredoxin_domain-containing_protein_5_homolog_[Bombyx_mori]
GO:0003756 F protein disulfide isomerase activity
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006457 P protein folding
GO:0008152 P metabolic process
GO:0016853 F isomerase activity
GO:0034976 P response to endoplasmic reticulum stress
GO:0043277 P apoptotic cell clearance
GO:0045454 P cell redox homeostasis
GO:0070062 C extracellular exosome
1932 O_BomoASG1173_internal:A_BomoASG_c6921_g1_i1
99bp
 leucine-rich_repeat_serine/threonine-protein_kinase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0006979 P response to oxidative stress
GO:0007264 P small GTPase mediated signal transduction
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0034613 P cellular protein localization
GO:0034976 P response to endoplasmic reticulum stress
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0048489 P synaptic vesicle transport
GO:0048846 P axon extension involved in axon guidance
GO:1901215 P negative regulation of neuron death
1933 O_BomoASG11740_5prime_partial:A_BomoASG_c27179_g1_i1
195bp
 arf-GAP_with_SH3_domain,_ANK_repeat_and_PH_domain-containing_protein_2_isoform_X1_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0043197 C dendritic spine
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
GO:0060271 P cilium assembly
GO:0061000 P negative regulation of dendritic spine development
1934 O_BomoASG11741_5prime_partial:A_BomoASG_c27184_g1_i3
111bp
 pre-mRNA_3'-end-processing_factor_FIP1_isoform_X2_[Bombyx_mori]
1935 O_BomoASG11742_complete:A_BomoASG_c27187_g1_i1
104bp
1936 O_BomoASG11743_5prime_partial:A_BomoASG_c27188_g1_i1
138bp
 adipocyte_plasma_membrane-associated_protein_[Bombyx_mori]
1937 O_BomoASG11744_3prime_partial:A_BomoASG_c27188_g2_i1
607bp
 adipocyte_plasma_membrane-associated_protein_[Bombyx_mori]
GO:0004064 F arylesterase activity
GO:0005783 C endoplasmic reticulum
GO:0009058 P biosynthetic process
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0016844 F strictosidine synthase activity
GO:0070062 C extracellular exosome
1938 O_BomoASG11745_5prime_partial:A_BomoASG_c27188_g2_i1
125bp
 hypothetical_protein_TH70_1750_[Streptococcus_agalactiae]
GO:0009279 C cell outer membrane
GO:0016020 C membrane
GO:0050825 F ice binding
1939 O_BomoASG11746_internal:A_BomoASG_c27190_g1_i1
329bp
 oocyte_zinc_finger_protein_XlCOF28_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
1940 O_BomoASG11747_5prime_partial:A_BomoASG_c27190_g1_i1
133bp
1941 O_BomoASG11748_internal:A_BomoASG_c27190_g1_i2
255bp
 oocyte_zinc_finger_protein_XlCOF28_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
1942 O_BomoASG11749_5prime_partial:A_BomoASG_c27190_g1_i2
133bp
1943 O_BomoASG1174_complete:A_BomoASG_c6929_g1_i1
110bp
 N-alpha-acetyltransferase_38,_NatC_auxiliary_subunit_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0031417 C NatC complex
GO:0043066 P negative regulation of apoptotic process
1944 O_BomoASG11750_complete:A_BomoASG_c27195_g1_i1
115bp
1945 O_BomoASG11751_5prime_partial:A_BomoASG_c27196_g1_i1
185bp
 CG10993-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000447 P endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472 P endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000480 P endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0034462 P small-subunit processome assembly
GO:0042254 P ribosome biogenesis
1946 O_BomoASG11752_complete:A_BomoASG_c27196_g1_i2
194bp
 CG10993-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000447 P endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472 P endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000480 P endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0034462 P small-subunit processome assembly
GO:0042254 P ribosome biogenesis
1947 O_BomoASG11753_5prime_partial:A_BomoASG_c27197_g1_i1
548bp
 cuticular_protein_hypothetical_28_precursor_[Bombyx_mori]
1948 O_BomoASG11754_complete:A_BomoASG_c27197_g1_i1
128bp
1949 O_BomoASG11755_complete:A_BomoASG_c27197_g1_i2
128bp
1950 O_BomoASG11756_internal:A_BomoASG_c27199_g1_i1
235bp
 phosphatidylserine_synthase_1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006659 P phosphatidylserine biosynthetic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
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