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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1681 O_BomoASG11513_complete:A_BomoASG_c27035_g1_i2
190bp
1682 O_BomoASG11514_complete:A_BomoASG_c27035_g1_i2
111bp
1683 O_BomoASG11515_5prime_partial:A_BomoASG_c27036_g1_i1
148bp
 coiled-coil_domain-containing_protein_191_isoform_X2_[Bombyx_mori]
1684 O_BomoASG11516_internal:A_BomoASG_c27036_g2_i1
117bp
 coiled-coil_domain-containing_protein_191_isoform_X2_[Bombyx_mori]
1685 O_BomoASG11517_complete:A_BomoASG_c27042_g1_i2
228bp
 uncharacterized_protein_LOC110385301_[Bombyx_mori]
1686 O_BomoASG11518_complete:A_BomoASG_c27042_g1_i2
168bp
1687 O_BomoASG11519_complete:A_BomoASG_c27042_g1_i2
148bp
1688 O_BomoASG1151_complete:A_BomoASG_c6762_g1_i1
228bp
 cleavage_and_polyadenylation_specific_factor_5_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005849 C mRNA cleavage factor complex
GO:0006378 P mRNA polyadenylation
GO:0006397 P mRNA processing
GO:0016787 F hydrolase activity
GO:0017091 F mRNA 3'-UTR AU-rich region binding
GO:0042382 C paraspeckles
1689 O_BomoASG11520_5prime_partial:A_BomoASG_c27042_g1_i3
171bp
 uncharacterized_protein_LOC110385301_[Bombyx_mori]
1690 O_BomoASG11521_complete:A_BomoASG_c27042_g1_i3
148bp
1691 O_BomoASG11522_5prime_partial:A_BomoASG_c27042_g1_i4
484bp
 latrophilin_Cirl_isoform_X6_[Helicoverpa_armigera]
GO:0001764 P neuron migration
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005911 C cell-cell junction
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007416 P synapse assembly
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030246 F carbohydrate binding
GO:0030424 C axon
GO:0031987 P locomotion involved in locomotory behavior
GO:0042220 P response to cocaine
GO:0042995 C cell projection
GO:0046872 F metal ion binding
GO:0051965 P positive regulation of synapse assembly
GO:0098609 P cell-cell adhesion
1692 O_BomoASG11523_complete:A_BomoASG_c27042_g1_i4
168bp
1693 O_BomoASG11524_complete:A_BomoASG_c27042_g1_i4
148bp
1694 O_BomoASG11525_5prime_partial:A_BomoASG_c27042_g1_i4
138bp
1695 O_BomoASG11526_complete:A_BomoASG_c27043_g1_i1
1191bp
 breast_cancer_type_1_susceptibility_protein_homolog_[Bombyx_mori]
GO:0000724 P double-strand break repair via homologous recombination
GO:0000793 C condensed chromosome
GO:0000794 C condensed nuclear chromosome
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003684 F damaged DNA binding
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005759 C mitochondrial matrix
GO:0005813 C centrosome
GO:0005886 C plasma membrane
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006301 P postreplication repair
GO:0006302 P double-strand break repair
GO:0006310 P DNA recombination
GO:0006349 P regulation of gene expression by genomic imprinting
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007098 P centrosome cycle
GO:0007420 P brain development
GO:0007584 P response to nutrient
GO:0008270 F zinc ion binding
GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage
GO:0009048 P dosage compensation by inactivation of X chromosome
GO:0010033 P response to organic substance
GO:0010212 P response to ionizing radiation
GO:0010575 P positive regulation of vascular endothelial growth factor production
GO:0010628 P positive regulation of gene expression
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019899 F enzyme binding
GO:0030529 C ribonucleoprotein complex
GO:0031052 P chromosome breakage
GO:0031398 P positive regulation of protein ubiquitination
GO:0031436 C BRCA1-BARD1 complex
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031625 F ubiquitin protein ligase binding
GO:0032355 P response to estradiol
GO:0033147 P negative regulation of intracellular estrogen receptor signaling pathway
GO:0033160 P obsolete positive regulation of protein import into nucleus, translocation
GO:0033993 P response to lipid
GO:0035066 P positive regulation of histone acetylation
GO:0035067 P negative regulation of histone acetylation
GO:0042127 P regulation of cell population proliferation
GO:0043009 P chordate embryonic development
GO:0043234 C protein-containing complex
GO:0043627 P response to estrogen
GO:0044030 P regulation of DNA methylation
GO:0044212 F transcription cis-regulatory region binding
GO:0045717 P negative regulation of fatty acid biosynthetic process
GO:0045739 P positive regulation of DNA repair
GO:0045766 P positive regulation of angiogenesis
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0051298 P centrosome duplication
GO:0051571 P positive regulation of histone H3-K4 methylation
GO:0051572 P negative regulation of histone H3-K4 methylation
GO:0051573 P negative regulation of histone H3-K9 methylation
GO:0051574 P positive regulation of histone H3-K9 methylation
GO:0051865 P protein autoubiquitination
GO:0070512 P positive regulation of histone H4-K20 methylation
GO:0070531 C BRCA1-A complex
GO:0071158 P regulation of cell cycle
GO:0071356 P cellular response to tumor necrosis factor
GO:0071681 P cellular response to indole-3-methanol
GO:0085020 P protein K6-linked ubiquitination
GO:1902042 P negative regulation of extrinsic apoptotic signaling pathway via death domain receptors
GO:2000378 P negative regulation of reactive oxygen species metabolic process
GO:2000617 P positive regulation of histone H3-K9 acetylation
GO:2000620 P positive regulation of histone H4-K16 acetylation
1696 O_BomoASG11527_complete:A_BomoASG_c27044_g1_i3
466bp
 ileal_sodium/bile_acid_cotransporter-like_isoform_X3_[Helicoverpa_armigera]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0008508 F bile acid:sodium symporter activity
GO:0015293 F symporter activity
GO:0015721 P bile acid and bile salt transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0055085 P transmembrane transport
1697 O_BomoASG11528_complete:A_BomoASG_c27045_g1_i1
348bp
 uncharacterized_protein_LOC101746834_[Bombyx_mori]
GO:0001923 P B-1 B cell differentiation
GO:0002020 F protease binding
GO:0002223 P stimulatory C-type lectin receptor signaling pathway
GO:0002237 P response to molecule of bacterial origin
GO:0002726 P positive regulation of T cell cytokine production
GO:0004197 F cysteine-type endopeptidase activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006952 P defense response
GO:0007250 P activation of NF-kappaB-inducing kinase activity
GO:0008233 F peptidase activity
GO:0009620 P response to fungus
GO:0016567 P protein ubiquitination
GO:0016787 F hydrolase activity
GO:0019209 F kinase activator activity
GO:0031398 P positive regulation of protein ubiquitination
GO:0032449 C CBM complex
GO:0032743 P positive regulation of interleukin-2 production
GO:0038095 P Fc-epsilon receptor signaling pathway
GO:0042098 P T cell proliferation
GO:0042113 P B cell activation
GO:0042981 P regulation of apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043234 C protein-containing complex
GO:0043621 F protein self-association
GO:0045087 P innate immune response
GO:0048471 C perinuclear region of cytoplasm
GO:0050852 P T cell receptor signaling pathway
GO:0050856 P regulation of T cell receptor signaling pathway
GO:0050870 P positive regulation of T cell activation
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0051168 P nuclear export
GO:0051259 P protein complex oligomerization
1698 O_BomoASG11529_complete:A_BomoASG_c27049_g1_i1
885bp
 uncharacterized_protein_LOC101740740_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005923 C bicellular tight junction
GO:0012505 C endomembrane system
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0035556 P intracellular signal transduction
GO:0042552 P myelination
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
1699 O_BomoASG1152_internal:A_BomoASG_c6768_g1_i1
103bp
1700 O_BomoASG11530_complete:A_BomoASG_c27049_g1_i2
885bp
 uncharacterized_protein_LOC101740740_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005923 C bicellular tight junction
GO:0012505 C endomembrane system
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0035556 P intracellular signal transduction
GO:0042552 P myelination
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
1701 O_BomoASG11531_internal:A_BomoASG_c27051_g1_i1
145bp
 uncharacterized_protein_LOC110376048_[Helicoverpa_armigera]
1702 O_BomoASG11532_5prime_partial:A_BomoASG_c27051_g1_i1
138bp
1703 O_BomoASG11533_complete:A_BomoASG_c27053_g1_i1
111bp
 uncharacterized_protein_LOC101738102_[Bombyx_mori]
1704 O_BomoASG11534_complete:A_BomoASG_c27055_g1_i1
409bp
 protein_ultraspiracle_homolog_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
1705 O_BomoASG11535_complete:A_BomoASG_c27055_g1_i1
107bp
1706 O_BomoASG11536_complete:A_BomoASG_c27055_g1_i1
101bp
1707 O_BomoASG11537_complete:A_BomoASG_c27055_g1_i3
463bp
 protein_ultraspiracle_homolog_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
1708 O_BomoASG11538_complete:A_BomoASG_c27055_g1_i3
115bp
1709 O_BomoASG11539_complete:A_BomoASG_c27055_g1_i3
107bp
1710 O_BomoASG1153_internal:A_BomoASG_c6768_g1_i1
103bp
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