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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1711 O_BomoASG11540_complete:A_BomoASG_c27055_g1_i3
101bp
1712 O_BomoASG11541_complete:A_BomoASG_c27055_g1_i4
463bp
 protein_ultraspiracle_homolog_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
1713 O_BomoASG11542_3prime_partial:A_BomoASG_c27055_g1_i4
146bp
1714 O_BomoASG11543_complete:A_BomoASG_c27055_g1_i4
107bp
1715 O_BomoASG11544_complete:A_BomoASG_c27055_g1_i4
101bp
1716 O_BomoASG11545_internal:A_BomoASG_c27056_g1_i1
474bp
 phospholipase_C_gamma_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0001726 C ruffle
GO:0002223 P stimulatory C-type lectin receptor signaling pathway
GO:0004435 F phosphatidylinositol phospholipase C activity
GO:0004871 F obsolete signal transducer activity
GO:0005168 F neurotrophin TRKA receptor binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0006629 P lipid metabolic process
GO:0007165 P signal transduction
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0008081 F phosphoric diester hydrolase activity
GO:0008180 C COP9 signalosome
GO:0009395 P phospholipid catabolic process
GO:0010634 P positive regulation of epithelial cell migration
GO:0016042 P lipid catabolic process
GO:0016477 P cell migration
GO:0016787 F hydrolase activity
GO:0019722 P calcium-mediated signaling
GO:0019901 F protein kinase binding
GO:0030027 C lamellipodium
GO:0030971 F receptor tyrosine kinase binding
GO:0035254 F glutamate receptor binding
GO:0035556 P intracellular signal transduction
GO:0042995 C cell projection
GO:0043536 P positive regulation of blood vessel endothelial cell migration
GO:0045766 P positive regulation of angiogenesis
GO:0046872 F metal ion binding
GO:0050852 P T cell receptor signaling pathway
GO:0051281 P positive regulation of release of sequestered calcium ion into cytosol
GO:0071364 P cellular response to epidermal growth factor stimulus
1717 O_BomoASG11546_complete:A_BomoASG_c27058_g1_i1
855bp
 vam6/Vps39-like_protein_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030123 C AP-3 adaptor complex
GO:0030897 C HOPS complex
GO:0031902 C late endosome membrane
GO:0034058 P endosomal vesicle fusion
GO:0097576 P vacuole fusion
GO:1902774 P late endosome to lysosome transport
GO:1990126 P endocytic recycling
1718 O_BomoASG11547_complete:A_BomoASG_c27058_g1_i2
855bp
 vam6/Vps39-like_protein_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030123 C AP-3 adaptor complex
GO:0030897 C HOPS complex
GO:0031902 C late endosome membrane
GO:0034058 P endosomal vesicle fusion
GO:0097576 P vacuole fusion
GO:1902774 P late endosome to lysosome transport
GO:1990126 P endocytic recycling
1719 O_BomoASG11548_3prime_partial:A_BomoASG_c27059_g1_i2
233bp
 protein_SERAC1_[Bombyx_mori]
GO:0005578 C extracellular matrix
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0006629 P lipid metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030198 P extracellular matrix organization
1720 O_BomoASG11549_complete:A_BomoASG_c27060_g1_i1
171bp
 uncharacterized_protein_LOC101735974_[Bombyx_mori]
1721 O_BomoASG1154_internal:A_BomoASG_c6768_g1_i1
103bp
1722 O_BomoASG11550_internal:A_BomoASG_c27062_g1_i1
205bp
 endonuclease_III-like_protein_1_isoform_X2_[Bombyx_mori]
GO:0000703 F oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
GO:0002230 P positive regulation of defense response to virus by host
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003824 F catalytic activity
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006285 P base-excision repair, AP site formation
GO:0006296 P nucleotide-excision repair, DNA incision, 5'-to lesion
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0016829 F lyase activity
GO:0019104 F DNA N-glycosylase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
1723 O_BomoASG11551_3prime_partial:A_BomoASG_c27062_g2_i1
228bp
 endonuclease_III-like_protein_1_isoform_X2_[Bombyx_mori]
GO:0000703 F oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
GO:0002230 P positive regulation of defense response to virus by host
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003824 F catalytic activity
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006285 P base-excision repair, AP site formation
GO:0006296 P nucleotide-excision repair, DNA incision, 5'-to lesion
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0016829 F lyase activity
GO:0019104 F DNA N-glycosylase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
1724 O_BomoASG11552_3prime_partial:A_BomoASG_c27062_g2_i2
228bp
 endonuclease_III-like_protein_1_isoform_X2_[Bombyx_mori]
GO:0000703 F oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
GO:0002230 P positive regulation of defense response to virus by host
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003824 F catalytic activity
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006285 P base-excision repair, AP site formation
GO:0006296 P nucleotide-excision repair, DNA incision, 5'-to lesion
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0016829 F lyase activity
GO:0019104 F DNA N-glycosylase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
1725 O_BomoASG11553_3prime_partial:A_BomoASG_c27062_g2_i3
270bp
 endonuclease_III-like_protein_1_isoform_X1_[Bombyx_mori]
GO:0000703 F oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
GO:0002230 P positive regulation of defense response to virus by host
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003824 F catalytic activity
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006285 P base-excision repair, AP site formation
GO:0006296 P nucleotide-excision repair, DNA incision, 5'-to lesion
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0016829 F lyase activity
GO:0019104 F DNA N-glycosylase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
1726 O_BomoASG11554_complete:A_BomoASG_c27063_g1_i1
1217bp
 sterile_alpha_and_TIR_motif-containing_protein_1_isoform_X1_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0030424 C axon
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0045087 P innate immune response
GO:0048678 P response to axon injury
GO:1901214 P regulation of neuron death
1727 O_BomoASG11555_complete:A_BomoASG_c27063_g1_i1
120bp
1728 O_BomoASG11556_5prime_partial:A_BomoASG_c27063_g1_i1
106bp
1729 O_BomoASG11557_complete:A_BomoASG_c27063_g1_i2
1198bp
 sterile_alpha_and_TIR_motif-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0030424 C axon
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0045087 P innate immune response
GO:0048678 P response to axon injury
GO:1901214 P regulation of neuron death
1730 O_BomoASG11558_5prime_partial:A_BomoASG_c27063_g1_i2
106bp
1731 O_BomoASG11559_complete:A_BomoASG_c27063_g1_i2
101bp
1732 O_BomoASG1155_3prime_partial:A_BomoASG_c6771_g1_i1
144bp
 zinc_finger_protein_98_[Bombyx_mori]
1733 O_BomoASG11560_complete:A_BomoASG_c27063_g1_i3
1117bp
 sterile_alpha_and_TIR_motif-containing_protein_1_isoform_X3_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0030424 C axon
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0045087 P innate immune response
GO:0048678 P response to axon injury
GO:1901214 P regulation of neuron death
1734 O_BomoASG11561_complete:A_BomoASG_c27063_g1_i4
1098bp
 sterile_alpha_and_TIR_motif-containing_protein_1_isoform_X4_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0030424 C axon
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0045087 P innate immune response
GO:0048678 P response to axon injury
GO:1901214 P regulation of neuron death
1735 O_BomoASG11562_internal:A_BomoASG_c27064_g1_i2
378bp
 S_phase_cyclin_A-associated_protein_in_the_endoplasmic_reticulum_isoform_X2_[Bombyx_mori]
1736 O_BomoASG11563_complete:A_BomoASG_c27064_g1_i2
147bp
1737 O_BomoASG11564_internal:A_BomoASG_c27065_g1_i1
111bp
 protein_groucho_isoform_X4_[Bombyx_mori]
1738 O_BomoASG11565_internal:A_BomoASG_c27065_g1_i2
214bp
 protein_groucho_isoform_X3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001106 F transcription corepressor activity
GO:0003677 F DNA binding
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007015 P actin filament organization
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007541 P sex determination, primary response to X:A ratio
GO:0008134 F transcription factor binding
GO:0016055 P Wnt signaling pathway
GO:0030154 P cell differentiation
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0043234 C protein-containing complex
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046331 P lateral inhibition
GO:0048813 P dendrite morphogenesis
GO:0070491 F DNA-binding transcription factor binding
GO:0071837 F HMG box domain binding
GO:0071906 F CRD domain binding
GO:0090090 P negative regulation of canonical Wnt signaling pathway
1739 O_BomoASG11566_internal:A_BomoASG_c27065_g1_i3
218bp
 protein_groucho_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001106 F transcription corepressor activity
GO:0003677 F DNA binding
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007015 P actin filament organization
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007541 P sex determination, primary response to X:A ratio
GO:0008134 F transcription factor binding
GO:0016055 P Wnt signaling pathway
GO:0030154 P cell differentiation
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0043234 C protein-containing complex
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046331 P lateral inhibition
GO:0048813 P dendrite morphogenesis
GO:0070491 F DNA-binding transcription factor binding
GO:0071837 F HMG box domain binding
GO:0071906 F CRD domain binding
GO:0090090 P negative regulation of canonical Wnt signaling pathway
1740 O_BomoASG11567_3prime_partial:A_BomoASG_c27065_g1_i3
112bp
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