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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1621 O_BomoASG1145_internal:A_BomoASG_c6731_g1_i1
161bp
 chromosome-associated_kinesin_KIF4_isoform_X3_[Bombyx_mori]
1622 O_BomoASG11460_5prime_partial:A_BomoASG_c27017_g2_i1
123bp
 PREDICTED:_uncharacterized_protein_LOC106121193_[Papilio_xuthus]
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0006914 P autophagy
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021680 P cerebellar Purkinje cell layer development
GO:0030425 C dendrite
GO:0030902 P hindbrain development
GO:0031902 C late endosome membrane
GO:0035091 F phosphatidylinositol binding
GO:0042995 C cell projection
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
GO:0097352 P autophagosome maturation
1623 O_BomoASG11461_5prime_partial:A_BomoASG_c27017_g1_i2
191bp
 Bm8_interacting_protein_precursor_[Bombyx_mori]
1624 O_BomoASG11462_5prime_partial:A_BomoASG_c27018_g1_i2
236bp
 uncharacterized_protein_LOC105842107_isoform_X1_[Bombyx_mori]
1625 O_BomoASG11463_complete:A_BomoASG_c27019_g1_i1
254bp
 uncharacterized_protein_LOC101740914_[Bombyx_mori]
1626 O_BomoASG11464_5prime_partial:A_BomoASG_c27020_g1_i1
102bp
1627 O_BomoASG11465_5prime_partial:A_BomoASG_c27020_g1_i1
101bp
1628 O_BomoASG11466_complete:A_BomoASG_c27020_g1_i1
101bp
1629 O_BomoASG11467_complete:A_BomoASG_c27020_g1_i2
108bp
1630 O_BomoASG11468_5prime_partial:A_BomoASG_c27020_g1_i2
102bp
1631 O_BomoASG11469_3prime_partial:A_BomoASG_c27020_g1_i3
260bp
 pre-mRNA_cleavage_complex_2_protein_Pcf11_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0000993 F RNA polymerase II complex binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005849 C mRNA cleavage factor complex
GO:0006369 P termination of RNA polymerase II transcription
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0031124 P mRNA 3'-end processing
1632 O_BomoASG1146_complete:A_BomoASG_c6732_g1_i1
607bp
 F-box_only_protein_21_[Bombyx_mori]
GO:0003677 F DNA binding
1633 O_BomoASG11470_5prime_partial:A_BomoASG_c27020_g1_i3
186bp
1634 O_BomoASG11471_complete:A_BomoASG_c27020_g1_i3
106bp
1635 O_BomoASG11472_5prime_partial:A_BomoASG_c27020_g1_i3
102bp
1636 O_BomoASG11473_complete:A_BomoASG_c27020_g1_i4
106bp
1637 O_BomoASG11474_5prime_partial:A_BomoASG_c27020_g1_i4
102bp
1638 O_BomoASG11475_3prime_partial:A_BomoASG_c27020_g1_i5
252bp
 pre-mRNA_cleavage_complex_2_protein_Pcf11_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0000993 F RNA polymerase II complex binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005849 C mRNA cleavage factor complex
GO:0006369 P termination of RNA polymerase II transcription
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0031124 P mRNA 3'-end processing
1639 O_BomoASG11476_5prime_partial:A_BomoASG_c27020_g1_i5
178bp
1640 O_BomoASG11477_complete:A_BomoASG_c27020_g1_i5
106bp
1641 O_BomoASG11478_5prime_partial:A_BomoASG_c27020_g1_i5
102bp
1642 O_BomoASG11479_3prime_partial:A_BomoASG_c27021_g1_i1
657bp
 microsomal_triglyceride_transfer_protein,_partial_[Bombyx_mori]
GO:0005319 F lipid transporter activity
GO:0005548 F phospholipid transporter activity
GO:0005783 C endoplasmic reticulum
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0015914 P phospholipid transport
GO:0034197 P triglyceride transport
GO:0034377 P plasma lipoprotein particle assembly
GO:0046982 F protein heterodimerization activity
1643 O_BomoASG1147_internal:A_BomoASG_c6736_g1_i1
165bp
 uncharacterized_protein_LOC105841303_isoform_X2_[Bombyx_mori]
1644 O_BomoASG11480_5prime_partial:A_BomoASG_c27021_g1_i1
346bp
1645 O_BomoASG11481_5prime_partial:A_BomoASG_c27021_g1_i1
283bp
1646 O_BomoASG11482_complete:A_BomoASG_c27022_g1_i1
766bp
 LOW_QUALITY_PROTEIN:_E3_UFM1-protein_ligase_1_homolog_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016874 F ligase activity
1647 O_BomoASG11483_complete:A_BomoASG_c27024_g1_i1
366bp
 UDP-N-acetylglucosamine_transporter_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005351 F carbohydrate:proton symporter activity
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015788 P UDP-N-acetylglucosamine transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1648 O_BomoASG11484_complete:A_BomoASG_c27024_g1_i1
111bp
1649 O_BomoASG11485_complete:A_BomoASG_c27024_g1_i1
103bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
1650 O_BomoASG11486_5prime_partial:A_BomoASG_c27024_g1_i2
190bp
 UDP-N-acetylglucosamine_transporter_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005351 F carbohydrate:proton symporter activity
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015788 P UDP-N-acetylglucosamine transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
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