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Search ORF from Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

1591

O_BomoASG11432_3prime_partial:A_BomoASG_c27003_g1_i1

340bp

Bomo_Chr18

zinc_finger_protein_431-like_[Bombyx_mori]

GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0005515	F	protein binding
GO:0005622	C	intracellular anatomical structure
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0046872	F	metal ion binding

1592

O_BomoASG11433_3prime_partial:A_BomoASG_c27003_g1_i2

173bp

Bomo_Chr18

zinc_finger_protein_431-like_[Bombyx_mori]

GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0046872	F	metal ion binding

1593

O_BomoASG11434_complete:A_BomoASG_c27003_g1_i2

105bp

Bomo_Chr18

zinc_finger_protein_431-like_[Bombyx_mori]

1594

O_BomoASG11435_complete:A_BomoASG_c27004_g1_i1

655bp

Bomo_Chr25

conserved_oligomeric_Golgi_complex_subunit_2_[Bombyx_mori]

GO:0000139	C	Golgi membrane
GO:0005794	C	Golgi apparatus
GO:0006810	P	transport
GO:0006891	P	intra-Golgi vesicle-mediated transport
GO:0007030	P	Golgi organization
GO:0008565	F	obsolete protein transporter activity
GO:0015031	P	protein transport
GO:0016020	C	membrane
GO:0017119	C	Golgi transport complex
GO:0033227	P	dsRNA transport

1595

O_BomoASG11436_complete:A_BomoASG_c27004_g1_i2

766bp

Bomo_Chr25

conserved_oligomeric_Golgi_complex_subunit_2_[Bombyx_mori]

GO:0000139	C	Golgi membrane
GO:0005794	C	Golgi apparatus
GO:0006810	P	transport
GO:0006891	P	intra-Golgi vesicle-mediated transport
GO:0007030	P	Golgi organization
GO:0008565	F	obsolete protein transporter activity
GO:0015031	P	protein transport
GO:0016020	C	membrane
GO:0017119	C	Golgi transport complex
GO:0033227	P	dsRNA transport

1596

O_BomoASG11437_internal:A_BomoASG_c27005_g1_i1

162bp

Bomo_Chr21

1597

O_BomoASG11438_5prime_partial:A_BomoASG_c27005_g1_i1

153bp

Bomo_Chr21

F-box/LRR-repeat_protein_7_[Bombyx_mori]

1598

O_BomoASG11439_3prime_partial:A_BomoASG_c27005_g1_i1

100bp

Bomo_Chr21

1599

O_BomoASG1143_complete:A_BomoASG_c6729_g1_i2

140bp

Bomo_Chr10

probable_peptide_chain_release_factor_C12orf65_homolog,_mitochondrial_[Bombyx_mori]

GO:0003747	F	translation release factor activity
GO:0004045	F	aminoacyl-tRNA hydrolase activity
GO:0005739	C	mitochondrion
GO:0005762	C	mitochondrial large ribosomal subunit
GO:0006412	P	translation
GO:0006415	P	translational termination
GO:0016149	F	translation release factor activity, codon specific
GO:0016150	F	translation release factor activity, codon nonspecific
GO:0043022	F	ribosome binding
GO:0070126	P	mitochondrial translational termination
GO:0072344	P	rescue of stalled ribosome

1600

O_BomoASG11440_complete:A_BomoASG_c27006_g1_i1

425bp

Bomo_Chr3

H/ACA_ribonucleoprotein_complex_non-core_subunit_NAF1_[Bombyx_mori]

GO:0001522	P	pseudouridine synthesis
GO:0003723	F	RNA binding
GO:0005634	C	nucleus
GO:0005732	C	sno(s)RNA-containing ribonucleoprotein complex
GO:0006364	P	rRNA processing
GO:0022008	P	neurogenesis
GO:0042254	P	ribosome biogenesis

1601

O_BomoASG11441_complete:A_BomoASG_c27006_g1_i1

114bp

Bomo_Chr3

1602

O_BomoASG11442_internal:A_BomoASG_c27007_g1_i1

168bp

Bomo_Chr7

biotin--protein_ligase_isoform_X2_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0000785	C	chromatin
GO:0003824	F	catalytic activity
GO:0004077	F	biotin-[acetyl-CoA-carboxylase] ligase activity
GO:0004078	F	biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity
GO:0004079	F	biotin-[methylmalonyl-CoA-carboxytransferase] ligase activity
GO:0004080	F	biotin-[propionyl-CoA-carboxylase (ATP-hydrolyzing)] ligase activity
GO:0005524	F	ATP binding
GO:0005652	C	nuclear lamina
GO:0005737	C	cytoplasm
GO:0005739	C	mitochondrion
GO:0005829	C	cytosol
GO:0006464	P	cellular protein modification process
GO:0008152	P	metabolic process
GO:0008283	P	cell population proliferation
GO:0009305	P	protein biotinylation
GO:0009374	F	biotin binding
GO:0016363	C	nuclear matrix
GO:0016570	P	histone modification
GO:0016874	F	ligase activity
GO:0018271	F	biotin-protein ligase activity
GO:0019899	F	enzyme binding
GO:0042803	F	protein homodimerization activity
GO:0070781	P	response to biotin
GO:0071110	P	histone biotinylation

1603

O_BomoASG11443_internal:A_BomoASG_c27007_g1_i2

172bp

Bomo_Chr7

biotin--protein_ligase_isoform_X2_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0000785	C	chromatin
GO:0003824	F	catalytic activity
GO:0004077	F	biotin-[acetyl-CoA-carboxylase] ligase activity
GO:0004078	F	biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity
GO:0004079	F	biotin-[methylmalonyl-CoA-carboxytransferase] ligase activity
GO:0004080	F	biotin-[propionyl-CoA-carboxylase (ATP-hydrolyzing)] ligase activity
GO:0005524	F	ATP binding
GO:0005652	C	nuclear lamina
GO:0005737	C	cytoplasm
GO:0005739	C	mitochondrion
GO:0005829	C	cytosol
GO:0006464	P	cellular protein modification process
GO:0008152	P	metabolic process
GO:0008283	P	cell population proliferation
GO:0009305	P	protein biotinylation
GO:0009374	F	biotin binding
GO:0016363	C	nuclear matrix
GO:0016570	P	histone modification
GO:0016874	F	ligase activity
GO:0018271	F	biotin-protein ligase activity
GO:0019899	F	enzyme binding
GO:0042803	F	protein homodimerization activity
GO:0070781	P	response to biotin
GO:0071110	P	histone biotinylation

1604

O_BomoASG11444_3prime_partial:A_BomoASG_c27008_g1_i1

339bp

Bomo_Chr1

heparanase-like_protein_[Bombyx_mori]

GO:0004566	F	beta-glucuronidase activity
GO:0005515	F	protein binding
GO:0005576	C	extracellular region
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005764	C	lysosome
GO:0005765	C	lysosomal membrane
GO:0005975	P	carbohydrate metabolic process
GO:0006027	P	glycosaminoglycan catabolic process
GO:0006029	P	proteoglycan metabolic process
GO:0007155	P	cell adhesion
GO:0007160	P	cell-matrix adhesion
GO:0010575	P	positive regulation of vascular endothelial growth factor production
GO:0016020	C	membrane
GO:0016787	F	hydrolase activity
GO:0016798	F	hydrolase activity, acting on glycosyl bonds
GO:0030194	P	positive regulation of blood coagulation
GO:0030200	P	heparan sulfate proteoglycan catabolic process
GO:0030305	F	heparanase activity
GO:0033690	P	positive regulation of osteoblast proliferation
GO:0042060	P	wound healing
GO:0043202	C	lysosomal lumen
GO:0043231	C	intracellular membrane-bounded organelle
GO:0045121	C	membrane raft
GO:0045545	F	syndecan binding
GO:0046983	F	protein dimerization activity
GO:0051797	P	regulation of hair follicle development
GO:0051798	P	positive regulation of hair follicle development
GO:0051897	P	positive regulation of protein kinase B signaling
GO:0060055	P	angiogenesis involved in wound healing
GO:0061042	P	vascular wound healing

1605

O_BomoASG11445_5prime_partial:A_BomoASG_c27009_g1_i1

351bp

Bomo_Chr17

uncharacterized_protein_LOC101740749_[Bombyx_mori]

1606

O_BomoASG11446_complete:A_BomoASG_c27009_g1_i1

114bp

Bomo_Chr17

1607

O_BomoASG11447_complete:A_BomoASG_c27009_g1_i2

948bp

Bomo_Chr17

uncharacterized_protein_LOC101740749_[Bombyx_mori]

1608

O_BomoASG11448_complete:A_BomoASG_c27009_g1_i2

134bp

Bomo_Chr17

1609

O_BomoASG11449_complete:A_BomoASG_c27009_g1_i2

114bp

Bomo_Chr17

1610

O_BomoASG1144_internal:A_BomoASG_c6731_g1_i1

161bp

Bomo_Chr25

1611

O_BomoASG11450_5prime_partial:A_BomoASG_c27009_g1_i3

223bp

Bomo_Chr17

uncharacterized_protein_LOC101740749_[Bombyx_mori]

1612

O_BomoASG11451_complete:A_BomoASG_c27009_g1_i3

114bp

Bomo_Chr17

1613

O_BomoASG11452_complete:A_BomoASG_c27010_g1_i2

196bp

Bomo_Chr27

ubiquitin-conjugating_enzyme_E2_H_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0004842	F	ubiquitin-protein transferase activity
GO:0005524	F	ATP binding
GO:0005737	C	cytoplasm
GO:0016567	P	protein ubiquitination
GO:0016740	F	transferase activity
GO:0031625	F	ubiquitin protein ligase binding
GO:0043161	P	proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0061630	F	ubiquitin protein ligase activity
GO:0061631	F	ubiquitin conjugating enzyme activity
GO:0070936	P	protein K48-linked ubiquitination
GO:0070979	P	protein K11-linked ubiquitination

1614

O_BomoASG11453_complete:A_BomoASG_c27011_g1_i2

218bp

Bomo_Chr19

pro-epidermal_growth_factor_[Bombyx_mori]

GO:0000086	P	G2/M transition of mitotic cell cycle
GO:0000139	C	Golgi membrane
GO:0003015	P	heart process
GO:0005154	F	epidermal growth factor receptor binding
GO:0005515	F	protein binding
GO:0005576	C	extracellular region
GO:0005783	C	endoplasmic reticulum
GO:0005789	C	endoplasmic reticulum membrane
GO:0005794	C	Golgi apparatus
GO:0005886	C	plasma membrane
GO:0007173	P	epidermal growth factor receptor signaling pathway
GO:0007275	P	multicellular organism development
GO:0007298	P	border follicle cell migration
GO:0007399	P	nervous system development
GO:0007421	P	stomatogastric nervous system development
GO:0007422	P	peripheral nervous system development
GO:0007424	P	open tracheal system development
GO:0007432	P	salivary gland boundary specification
GO:0007438	P	oenocyte development
GO:0007476	P	imaginal disc-derived wing morphogenesis
GO:0008284	P	positive regulation of cell population proliferation
GO:0008317	F	gurken receptor binding
GO:0008355	P	olfactory learning
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016330	P	second mitotic wave involved in compound eye morphogenesis
GO:0022008	P	neurogenesis
GO:0030154	P	cell differentiation
GO:0035225	P	determination of genital disc primordium
GO:0035277	P	spiracle morphogenesis, open tracheal system
GO:0043066	P	negative regulation of apoptotic process
GO:0045470	P	R8 cell-mediated photoreceptor organization
GO:0045742	P	positive regulation of epidermal growth factor receptor signaling pathway
GO:0046673	P	negative regulation of compound eye retinal cell programmed cell death
GO:0046845	P	branched duct epithelial cell fate determination, open tracheal system
GO:0048149	P	behavioral response to ethanol
GO:0048865	P	stem cell fate commitment
GO:0050769	P	positive regulation of neurogenesis
GO:0061331	P	epithelial cell proliferation involved in Malpighian tubule morphogenesis

1615

O_BomoASG11454_3prime_partial:A_BomoASG_c27015_g1_i1

177bp

Bomo_Chr3

disks_large_homolog_5_isoform_X2_[Bombyx_mori]

GO:0005515	F	protein binding
GO:0005737	C	cytoplasm
GO:0005886	C	plasma membrane
GO:0005913	C	adherens junction
GO:0006461	P	protein-containing complex assembly
GO:0007165	P	signal transduction
GO:0008013	F	beta-catenin binding
GO:0008092	F	cytoskeletal protein binding
GO:0008285	P	negative regulation of cell population proliferation
GO:0016020	C	membrane
GO:0016337	P	cell-cell adhesion
GO:0030054	C	cell junction
GO:0030159	F	signaling receptor complex adaptor activity
GO:0030859	P	polarized epithelial cell differentiation
GO:0030901	P	midbrain development
GO:0035556	P	intracellular signal transduction
GO:0042981	P	regulation of apoptotic process
GO:0045176	P	apical protein localization
GO:0045186	P	zonula adherens assembly
GO:0045197	P	establishment or maintenance of epithelial cell apical/basal polarity
GO:0060441	P	epithelial tube branching involved in lung morphogenesis
GO:0071896	P	protein localization to adherens junction
GO:0072205	P	metanephric collecting duct development

1616

O_BomoASG11455_internal:A_BomoASG_c27015_g2_i1

358bp

Bomo_Chr3

disks_large_homolog_5_isoform_X2_[Bombyx_mori]

GO:0005515	F	protein binding
GO:0005737	C	cytoplasm
GO:0005886	C	plasma membrane
GO:0005913	C	adherens junction
GO:0006461	P	protein-containing complex assembly
GO:0007165	P	signal transduction
GO:0008013	F	beta-catenin binding
GO:0008092	F	cytoskeletal protein binding
GO:0008285	P	negative regulation of cell population proliferation
GO:0016020	C	membrane
GO:0016337	P	cell-cell adhesion
GO:0030054	C	cell junction
GO:0030159	F	signaling receptor complex adaptor activity
GO:0030859	P	polarized epithelial cell differentiation
GO:0030901	P	midbrain development
GO:0035556	P	intracellular signal transduction
GO:0042981	P	regulation of apoptotic process
GO:0045176	P	apical protein localization
GO:0045186	P	zonula adherens assembly
GO:0045197	P	establishment or maintenance of epithelial cell apical/basal polarity
GO:0060441	P	epithelial tube branching involved in lung morphogenesis
GO:0071896	P	protein localization to adherens junction
GO:0072205	P	metanephric collecting duct development