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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10531 O_BomoASG1947_complete:A_BomoASG_c12277_g1_i1
196bp
10532 O_BomoASG19480_complete:A_BomoASG_c30575_g1_i3
275bp
 gastrula_zinc_finger_protein_XlCGF52.1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10533 O_BomoASG19481_3prime_partial:A_BomoASG_c30577_g1_i1
1145bp
 leucine--tRNA_ligase,_cytoplasmic_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004823 F leucine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006429 P leucyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
10534 O_BomoASG19482_internal:A_BomoASG_c30579_g1_i1
330bp
 probable_ubiquitin_carboxyl-terminal_hydrolase_FAF-X_isoform_X3_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006897 P endocytosis
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0007601 P visual perception
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008354 P germ cell migration
GO:0008583 P mystery cell differentiation
GO:0009950 P dorsal/ventral axis specification
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0035192 P nuclear cortical migration
GO:0036459 F thiol-dependent deubiquitinase
GO:0045824 P negative regulation of innate immune response
GO:0045861 P negative regulation of proteolysis
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050896 P response to stimulus
10535 O_BomoASG19483_internal:A_BomoASG_c30579_g1_i2
658bp
 probable_ubiquitin_carboxyl-terminal_hydrolase_FAF-X_isoform_X3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001764 P neuron migration
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007292 P female gamete generation
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016020 C membrane
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030426 C growth cone
GO:0030509 P BMP signaling pathway
GO:0036459 F thiol-dependent deubiquitinase
GO:0042995 C cell projection
GO:0044267 P cellular protein metabolic process
GO:0048675 P axon extension
GO:0051301 P cell division
GO:0070410 F co-SMAD binding
10536 O_BomoASG19484_internal:A_BomoASG_c30579_g1_i4
511bp
 probable_ubiquitin_carboxyl-terminal_hydrolase_FAF-X_isoform_X3_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006897 P endocytosis
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0007601 P visual perception
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008354 P germ cell migration
GO:0008583 P mystery cell differentiation
GO:0009950 P dorsal/ventral axis specification
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0035192 P nuclear cortical migration
GO:0036459 F thiol-dependent deubiquitinase
GO:0045824 P negative regulation of innate immune response
GO:0045861 P negative regulation of proteolysis
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050896 P response to stimulus
10537 O_BomoASG19485_internal:A_BomoASG_c30579_g1_i5
437bp
 probable_ubiquitin_carboxyl-terminal_hydrolase_FAF-X_isoform_X3_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006897 P endocytosis
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0007601 P visual perception
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008354 P germ cell migration
GO:0008583 P mystery cell differentiation
GO:0009950 P dorsal/ventral axis specification
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0035192 P nuclear cortical migration
GO:0036459 F thiol-dependent deubiquitinase
GO:0045824 P negative regulation of innate immune response
GO:0045861 P negative regulation of proteolysis
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050896 P response to stimulus
10538 O_BomoASG19486_internal:A_BomoASG_c30579_g1_i6
743bp
 probable_ubiquitin_carboxyl-terminal_hydrolase_FAF-X_isoform_X3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001764 P neuron migration
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007292 P female gamete generation
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016020 C membrane
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030426 C growth cone
GO:0030509 P BMP signaling pathway
GO:0036459 F thiol-dependent deubiquitinase
GO:0042995 C cell projection
GO:0044267 P cellular protein metabolic process
GO:0048675 P axon extension
GO:0051301 P cell division
GO:0070410 F co-SMAD binding
10539 O_BomoASG19487_3prime_partial:A_BomoASG_c30580_g1_i1
422bp
 PREDICTED:_uncharacterized_protein_LOC107171075,_partial_[Diuraphis_noxia]
10540 O_BomoASG19488_5prime_partial:A_BomoASG_c30580_g1_i1
105bp
 PREDICTED:_uncharacterized_protein_LOC106137189_isoform_X1_[Amyelois_transitella]
10541 O_BomoASG19489_3prime_partial:A_BomoASG_c30580_g1_i2
448bp
 PREDICTED:_uncharacterized_protein_LOC107171075,_partial_[Diuraphis_noxia]
10542 O_BomoASG1948_complete:A_BomoASG_c12277_g1_i1
110bp
10543 O_BomoASG19490_5prime_partial:A_BomoASG_c30580_g1_i2
105bp
 PREDICTED:_uncharacterized_protein_LOC106137189_isoform_X1_[Amyelois_transitella]
10544 O_BomoASG19491_3prime_partial:A_BomoASG_c30580_g1_i3
733bp
 PREDICTED:_uncharacterized_protein_LOC103311931_[Acyrthosiphon_pisum]
10545 O_BomoASG19492_5prime_partial:A_BomoASG_c30580_g1_i3
105bp
 PREDICTED:_uncharacterized_protein_LOC106137189_isoform_X1_[Amyelois_transitella]
10546 O_BomoASG19493_5prime_partial:A_BomoASG_c30581_g2_i1
186bp
 armadillo_repeat-containing_protein_5_[Bombyx_mori]
10547 O_BomoASG19494_complete:A_BomoASG_c30581_g8_i1
274bp
 inositol_monophosphatase_1_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006020 P inositol metabolic process
GO:0006021 P inositol biosynthetic process
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0006796 P phosphate-containing compound metabolic process
GO:0007165 P signal transduction
GO:0008934 F inositol monophosphate 1-phosphatase activity
GO:0016787 F hydrolase activity
GO:0030145 F manganese ion binding
GO:0031403 F lithium ion binding
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043647 P inositol phosphate metabolic process
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0046855 P inositol phosphate dephosphorylation
GO:0046872 F metal ion binding
GO:0052832 F inositol monophosphate 3-phosphatase activity
GO:0052833 F inositol monophosphate 4-phosphatase activity
GO:0052834 F inositol monophosphate phosphatase activity
GO:0070062 C extracellular exosome
10548 O_BomoASG19495_complete:A_BomoASG_c30581_g7_i2
151bp
 actin-related_protein_2/3_complex_subunit_5_isoform_X1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005885 C Arp2/3 protein complex
GO:0005925 C focal adhesion
GO:0015629 C actin cytoskeleton
GO:0030833 P regulation of actin filament polymerization
GO:0034314 P Arp2/3 complex-mediated actin nucleation
GO:0070062 C extracellular exosome
10549 O_BomoASG19496_complete:A_BomoASG_c30581_g7_i3
149bp
 actin-depolymerizing_factor_1_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000902 P cell morphogenesis
GO:0000915 P actomyosin contractile ring assembly
GO:0001736 P establishment of planar polarity
GO:0001737 P establishment of imaginal disc-derived wing hair orientation
GO:0001745 P compound eye morphogenesis
GO:0003779 F actin binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005875 C microtubule associated complex
GO:0007015 P actin filament organization
GO:0007298 P border follicle cell migration
GO:0007409 P axonogenesis
GO:0008585 P female gonad development
GO:0010591 P regulation of lamellipodium assembly
GO:0015629 C actin cytoskeleton
GO:0016319 P mushroom body development
GO:0016363 C nuclear matrix
GO:0030041 P actin filament polymerization
GO:0030042 P actin filament depolymerization
GO:0036011 P imaginal disc-derived leg segmentation
GO:0042052 P rhabdomere development
GO:0042067 P establishment of ommatidial planar polarity
GO:0048749 P compound eye development
10550 O_BomoASG19497_5prime_partial:A_BomoASG_c30583_g1_i1
200bp
 uncharacterized_protein_LOC101746612_isoform_X3_[Bombyx_mori]
10551 O_BomoASG19498_complete:A_BomoASG_c30583_g1_i2
276bp
 uncharacterized_protein_LOC101746612_isoform_X1_[Bombyx_mori]
10552 O_BomoASG19499_complete:A_BomoASG_c30583_g1_i2
142bp
10553 O_BomoASG1949_complete:A_BomoASG_c12287_g1_i1
415bp
 cell_growth-regulating_nucleolar_protein_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008150 P biological_process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
10554 O_BomoASG194_internal:A_BomoASG_c1593_g1_i2
161bp
 nuclear_pore_complex_protein_Nup133_[Bombyx_mori]
10555 O_BomoASG19500_5prime_partial:A_BomoASG_c30583_g1_i4
170bp
 uncharacterized_protein_LOC101746612_isoform_X3_[Bombyx_mori]
10556 O_BomoASG19501_internal:A_BomoASG_c30584_g1_i1
524bp
 BAH_and_coiled-coil_domain-containing_protein_1_isoform_X1_[Bombyx_mori]
10557 O_BomoASG19502_complete:A_BomoASG_c30584_g1_i1
195bp
10558 O_BomoASG19503_5prime_partial:A_BomoASG_c30584_g1_i1
127bp
10559 O_BomoASG19504_3prime_partial:A_BomoASG_c30584_g1_i2
237bp
 BAH_and_coiled-coil_domain-containing_protein_1_isoform_X1_[Bombyx_mori]
10560 O_BomoASG19505_3prime_partial:A_BomoASG_c30584_g1_i2
149bp
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