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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10561 O_BomoASG19506_internal:A_BomoASG_c30584_g2_i1
222bp
 BAH_and_coiled-coil_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0000785 C chromatin
GO:0000976 F transcription cis-regulatory region binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005677 C chromatin silencing complex
GO:0005694 C chromosome
GO:0006342 P heterochromatin assembly
GO:0007275 P multicellular organism development
GO:0007560 P imaginal disc morphogenesis
GO:0030154 P cell differentiation
GO:0031507 P heterochromatin assembly
10562 O_BomoASG19507_3prime_partial:A_BomoASG_c30584_g2_i1
189bp
10563 O_BomoASG19508_complete:A_BomoASG_c30587_g1_i1
101bp
10564 O_BomoASG19509_5prime_partial:A_BomoASG_c30588_g1_i1
410bp
 Ca2_/calmodulin-dependent_protein_kinase_II_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004683 F calmodulin-dependent protein kinase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005954 C calcium- and calmodulin-dependent protein kinase complex
GO:0006468 P protein phosphorylation
GO:0007268 P chemical synaptic transmission
GO:0007528 P neuromuscular junction development
GO:0007611 P learning or memory
GO:0007616 P long-term memory
GO:0007619 P courtship behavior
GO:0008049 P male courtship behavior
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019233 P sensory perception of pain
GO:0030424 C axon
GO:0030425 C dendrite
GO:0045211 C postsynaptic membrane
GO:0048786 C presynaptic active zone
GO:0051489 P regulation of filopodium assembly
GO:0060278 P regulation of ovulation
10565 O_BomoASG1950_complete:A_BomoASG_c12290_g1_i1
113bp
10566 O_BomoASG19510_3prime_partial:A_BomoASG_c30589_g2_i1
206bp
 uncharacterized_protein_LOC101739492_[Bombyx_mori]
10567 O_BomoASG19511_internal:A_BomoASG_c30590_g1_i1
1024bp
 E3_ubiquitin-protein_ligase_UBR4_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
10568 O_BomoASG19512_5prime_partial:A_BomoASG_c30590_g1_i1
100bp
10569 O_BomoASG19513_3prime_partial:A_BomoASG_c30590_g1_i1
99bp
10570 O_BomoASG19514_complete:A_BomoASG_c30591_g1_i1
199bp
 uncharacterized_protein_LOC101736420_[Bombyx_mori]
10571 O_BomoASG19515_complete:A_BomoASG_c30591_g1_i1
169bp
10572 O_BomoASG19516_complete:A_BomoASG_c30592_g1_i1
107bp
10573 O_BomoASG19517_5prime_partial:A_BomoASG_c30593_g1_i1
163bp
 endoplasmic_reticulum_resident_protein_44_isoform_X1_[Bombyx_mori]
10574 O_BomoASG19518_internal:A_BomoASG_c30596_g1_i1
800bp
 nucleoporin_NUP188_homolog_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0006405 P RNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0015031 P protein transport
GO:0017056 F structural constituent of nuclear pore
GO:0044611 C nuclear pore inner ring
GO:0051028 P mRNA transport
10575 O_BomoASG19519_complete:A_BomoASG_c30596_g1_i1
114bp
10576 O_BomoASG1951_internal:A_BomoASG_c12293_g1_i1
128bp
 reverse_transcriptase_[Bombyx_mori]
10577 O_BomoASG19520_3prime_partial:A_BomoASG_c30596_g1_i2
839bp
 nucleoporin_NUP188_homolog_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0006405 P RNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0015031 P protein transport
GO:0017056 F structural constituent of nuclear pore
GO:0044611 C nuclear pore inner ring
GO:0051028 P mRNA transport
10578 O_BomoASG19521_complete:A_BomoASG_c30596_g1_i2
114bp
10579 O_BomoASG19522_complete:A_BomoASG_c30598_g1_i2
252bp
 enoyl-CoA_delta_isomerase_2,_mitochondrial_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0003824 F catalytic activity
GO:0004165 F dodecenoyl-CoA delta-isomerase activity
GO:0005102 F signaling receptor binding
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0005782 C peroxisomal matrix
GO:0006635 P fatty acid beta-oxidation
GO:0008152 P metabolic process
GO:0009062 P fatty acid catabolic process
GO:0016020 C membrane
GO:0016853 F isomerase activity
GO:0016863 F intramolecular oxidoreductase activity, transposing C=C bonds
GO:0043231 C intracellular membrane-bounded organelle
GO:0044255 P cellular lipid metabolic process
10580 O_BomoASG19523_complete:A_BomoASG_c30598_g1_i2
114bp
10581 O_BomoASG19524_internal:A_BomoASG_c30599_g4_i1
455bp
 nucleotide_excision_repair_protein_[Bombyx_mori]
GO:0000111 C nucleotide-excision repair factor 2 complex
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010777 P meiotic mismatch repair involved in reciprocal meiotic recombination
GO:0071942 C XPC complex
10582 O_BomoASG19525_5prime_partial:A_BomoASG_c30599_g5_i1
393bp
 homeodomain-interacting_protein_kinase_2_[Bombyx_mori]
10583 O_BomoASG19526_complete:A_BomoASG_c30599_g5_i1
319bp
10584 O_BomoASG19527_complete:A_BomoASG_c30599_g5_i1
229bp
10585 O_BomoASG19528_complete:A_BomoASG_c30599_g5_i1
170bp
10586 O_BomoASG19529_internal:A_BomoASG_c30599_g6_i1
161bp
 nucleotide_excision_repair_protein_[Bombyx_mori]
GO:0000111 C nucleotide-excision repair factor 2 complex
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010777 P meiotic mismatch repair involved in reciprocal meiotic recombination
GO:0071942 C XPC complex
10587 O_BomoASG1952_5prime_partial:A_BomoASG_c12294_g1_i1
111bp
10588 O_BomoASG19530_complete:A_BomoASG_c30599_g6_i1
104bp
10589 O_BomoASG19531_5prime_partial:A_BomoASG_c30599_g5_i4
140bp
 nucleotide_excision_repair_protein_[Bombyx_mori]
GO:0000111 C nucleotide-excision repair factor 2 complex
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010777 P meiotic mismatch repair involved in reciprocal meiotic recombination
GO:0071942 C XPC complex
10590 O_BomoASG19532_5prime_partial:A_BomoASG_c30599_g5_i5
304bp
 nucleotide_excision_repair_protein_[Bombyx_mori]
GO:0000111 C nucleotide-excision repair factor 2 complex
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010777 P meiotic mismatch repair involved in reciprocal meiotic recombination
GO:0071942 C XPC complex
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