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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10501 O_BomoASG19452_5prime_partial:A_BomoASG_c30565_g1_i1
249bp
 phosphatidylinositol_4-kinase_type_2-alpha_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004430 F 1-phosphatidylinositol 4-kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
10502 O_BomoASG19453_complete:A_BomoASG_c30565_g1_i2
388bp
 phosphatidylinositol_4-kinase_type_2-alpha_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004430 F 1-phosphatidylinositol 4-kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0033339 P pectoral fin development
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
10503 O_BomoASG19454_complete:A_BomoASG_c30565_g1_i3
452bp
 phosphatidylinositol_4-kinase_type_2-alpha_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004430 F 1-phosphatidylinositol 4-kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0033339 P pectoral fin development
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
10504 O_BomoASG19455_5prime_partial:A_BomoASG_c30568_g1_i2
201bp
 Collagen,_partial_[Bombyx_mori]
10505 O_BomoASG19456_5prime_partial:A_BomoASG_c30568_g1_i3
283bp
 Collagen,_partial_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0005618 C cell wall
GO:0016020 C membrane
10506 O_BomoASG19457_3prime_partial:A_BomoASG_c30569_g1_i1
550bp
 PREDICTED:_glycosyltransferase-like_protein_LARGE2_[Papilio_polytes]
GO:0000139 C Golgi membrane
GO:0003824 F catalytic activity
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0008152 P metabolic process
GO:0009101 P glycoprotein biosynthetic process
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030145 F manganese ion binding
GO:0035269 P protein O-linked mannosylation
GO:0042285 F xylosyltransferase activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0043403 P skeletal muscle tissue regeneration
GO:0046716 P muscle cell cellular homeostasis
GO:0046872 F metal ion binding
GO:0060538 P skeletal muscle organ development
10507 O_BomoASG19458_complete:A_BomoASG_c30570_g1_i1
181bp
 CKLF-like_MARVEL_transmembrane_domain-containing_protein_4_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005615 C extracellular space
GO:0006935 P chemotaxis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
10508 O_BomoASG19459_5prime_partial:A_BomoASG_c30571_g1_i1
142bp
 PREDICTED:_endoribonuclease_Dcr-1_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003727 F single-stranded RNA binding
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004525 F ribonuclease III activity
GO:0004530 F deoxyribonuclease I activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006309 P apoptotic DNA fragmentation
GO:0006396 P RNA processing
GO:0007279 P pole cell formation
GO:0007294 P germarium-derived oocyte fate determination
GO:0007367 P segment polarity determination
GO:0016246 P RNA interference
GO:0016442 C RISC complex
GO:0016443 F bidentate ribonuclease III activity
GO:0016787 F hydrolase activity
GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters
GO:0030422 P production of siRNA involved in RNA interference
GO:0030727 P germarium-derived female germ-line cyst formation
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0033227 P dsRNA transport
GO:0035087 P siRNA loading onto RISC involved in RNA interference
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042078 P germ-line stem cell division
GO:0042594 P response to starvation
GO:0045448 P mitotic cell cycle, embryonic
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0070883 F pre-miRNA binding
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
10509 O_BomoASG1945_complete:A_BomoASG_c12275_g1_i2
153bp
 histone_RNA_hairpin-binding_protein_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
10510 O_BomoASG19460_5prime_partial:A_BomoASG_c30571_g1_i1
139bp
10511 O_BomoASG19461_3prime_partial:A_BomoASG_c30571_g1_i1
138bp
10512 O_BomoASG19462_5prime_partial:A_BomoASG_c30571_g1_i2
185bp
 PREDICTED:_endoribonuclease_Dcr-1-like_isoform_X1_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003727 F single-stranded RNA binding
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004525 F ribonuclease III activity
GO:0004530 F deoxyribonuclease I activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006309 P apoptotic DNA fragmentation
GO:0006396 P RNA processing
GO:0007279 P pole cell formation
GO:0007294 P germarium-derived oocyte fate determination
GO:0007367 P segment polarity determination
GO:0016246 P RNA interference
GO:0016442 C RISC complex
GO:0016443 F bidentate ribonuclease III activity
GO:0016787 F hydrolase activity
GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters
GO:0030422 P production of siRNA involved in RNA interference
GO:0030727 P germarium-derived female germ-line cyst formation
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0033227 P dsRNA transport
GO:0035087 P siRNA loading onto RISC involved in RNA interference
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042078 P germ-line stem cell division
GO:0042594 P response to starvation
GO:0045448 P mitotic cell cycle, embryonic
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0070883 F pre-miRNA binding
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
10513 O_BomoASG19463_5prime_partial:A_BomoASG_c30571_g1_i2
182bp
10514 O_BomoASG19464_3prime_partial:A_BomoASG_c30571_g1_i2
181bp
10515 O_BomoASG19465_3prime_partial:A_BomoASG_c30571_g1_i3
407bp
10516 O_BomoASG19466_complete:A_BomoASG_c30571_g1_i3
353bp
 PREDICTED:_endoribonuclease_Dcr-1_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003727 F single-stranded RNA binding
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004525 F ribonuclease III activity
GO:0004530 F deoxyribonuclease I activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006309 P apoptotic DNA fragmentation
GO:0006396 P RNA processing
GO:0007279 P pole cell formation
GO:0007294 P germarium-derived oocyte fate determination
GO:0007367 P segment polarity determination
GO:0016246 P RNA interference
GO:0016442 C RISC complex
GO:0016443 F bidentate ribonuclease III activity
GO:0016787 F hydrolase activity
GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters
GO:0030422 P production of siRNA involved in RNA interference
GO:0030727 P germarium-derived female germ-line cyst formation
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0033227 P dsRNA transport
GO:0035087 P siRNA loading onto RISC involved in RNA interference
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042078 P germ-line stem cell division
GO:0042594 P response to starvation
GO:0045448 P mitotic cell cycle, embryonic
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0070883 F pre-miRNA binding
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
10517 O_BomoASG19467_5prime_partial:A_BomoASG_c30571_g1_i4
420bp
 PREDICTED:_endoribonuclease_Dcr-1_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003727 F single-stranded RNA binding
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004525 F ribonuclease III activity
GO:0004530 F deoxyribonuclease I activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006309 P apoptotic DNA fragmentation
GO:0006396 P RNA processing
GO:0007279 P pole cell formation
GO:0007294 P germarium-derived oocyte fate determination
GO:0007367 P segment polarity determination
GO:0016246 P RNA interference
GO:0016442 C RISC complex
GO:0016443 F bidentate ribonuclease III activity
GO:0016787 F hydrolase activity
GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters
GO:0030422 P production of siRNA involved in RNA interference
GO:0030727 P germarium-derived female germ-line cyst formation
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0033227 P dsRNA transport
GO:0035087 P siRNA loading onto RISC involved in RNA interference
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042078 P germ-line stem cell division
GO:0042594 P response to starvation
GO:0045448 P mitotic cell cycle, embryonic
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0070883 F pre-miRNA binding
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
10518 O_BomoASG19468_3prime_partial:A_BomoASG_c30571_g1_i4
416bp
10519 O_BomoASG19469_complete:A_BomoASG_c30571_g1_i5
336bp
10520 O_BomoASG1946_complete:A_BomoASG_c12277_g1_i1
694bp
 muscle_M-line_assembly_protein_unc-89_isoform_X2_[Bombyx_mori]
10521 O_BomoASG19470_complete:A_BomoASG_c30571_g1_i5
273bp
 PREDICTED:_endoribonuclease_Dcr-1-like_isoform_X1_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003727 F single-stranded RNA binding
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004525 F ribonuclease III activity
GO:0004530 F deoxyribonuclease I activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006309 P apoptotic DNA fragmentation
GO:0006396 P RNA processing
GO:0007279 P pole cell formation
GO:0007294 P germarium-derived oocyte fate determination
GO:0007367 P segment polarity determination
GO:0016246 P RNA interference
GO:0016442 C RISC complex
GO:0016443 F bidentate ribonuclease III activity
GO:0016787 F hydrolase activity
GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters
GO:0030422 P production of siRNA involved in RNA interference
GO:0030727 P germarium-derived female germ-line cyst formation
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0033227 P dsRNA transport
GO:0035087 P siRNA loading onto RISC involved in RNA interference
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042078 P germ-line stem cell division
GO:0042594 P response to starvation
GO:0045448 P mitotic cell cycle, embryonic
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0070883 F pre-miRNA binding
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
10522 O_BomoASG19471_complete:A_BomoASG_c30572_g1_i1
311bp
 homeotic_protein_Sex_combs_reduced_[Helicoverpa_armigera]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
GO:0007381 P specification of segmental identity, labial segment
GO:0007432 P salivary gland boundary specification
GO:0007494 P midgut development
GO:0007548 P sex differentiation
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045498 P sex comb development
GO:0045944 P positive regulation of transcription by RNA polymerase II
10523 O_BomoASG19472_5prime_partial:A_BomoASG_c30572_g1_i2
215bp
 homeotic_protein_Sex_combs_reduced_[Helicoverpa_armigera]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
GO:0007381 P specification of segmental identity, labial segment
GO:0007432 P salivary gland boundary specification
GO:0007494 P midgut development
GO:0007548 P sex differentiation
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045498 P sex comb development
GO:0045944 P positive regulation of transcription by RNA polymerase II
10524 O_BomoASG19473_complete:A_BomoASG_c30573_g1_i1
299bp
 thymidylate_synthase_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003729 F mRNA binding
GO:0004799 F thymidylate synthase activity
GO:0005542 F folic acid binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0006206 P pyrimidine nucleobase metabolic process
GO:0006231 P dTMP biosynthetic process
GO:0006235 P dTTP biosynthetic process
GO:0007568 P aging
GO:0007623 P circadian rhythm
GO:0008144 F obsolete drug binding
GO:0008168 F methyltransferase activity
GO:0009165 P nucleotide biosynthetic process
GO:0009636 P response to toxic substance
GO:0014070 P response to organic cyclic compound
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0019088 P transformation of host cell by virus
GO:0019860 P uracil metabolic process
GO:0031100 P animal organ regeneration
GO:0032259 P methylation
GO:0032570 P response to progesterone
GO:0033189 P response to vitamin A
GO:0034097 P response to cytokine
GO:0035999 P tetrahydrofolate interconversion
GO:0042493 P response to xenobiotic stimulus
GO:0042803 F protein homodimerization activity
GO:0045471 P response to ethanol
GO:0046078 P dUMP metabolic process
GO:0046653 P tetrahydrofolate metabolic process
GO:0046683 P response to organophosphorus
GO:0048037 F obsolete cofactor binding
GO:0048589 P developmental growth
GO:0051216 P cartilage development
GO:0051384 P response to glucocorticoid
GO:0051593 P response to folic acid
GO:0060574 P intestinal epithelial cell maturation
10525 O_BomoASG19474_5prime_partial:A_BomoASG_c30573_g1_i2
291bp
 thymidylate_synthase_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003729 F mRNA binding
GO:0004799 F thymidylate synthase activity
GO:0005542 F folic acid binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0006206 P pyrimidine nucleobase metabolic process
GO:0006231 P dTMP biosynthetic process
GO:0006235 P dTTP biosynthetic process
GO:0007568 P aging
GO:0007623 P circadian rhythm
GO:0008144 F obsolete drug binding
GO:0008168 F methyltransferase activity
GO:0009165 P nucleotide biosynthetic process
GO:0009636 P response to toxic substance
GO:0014070 P response to organic cyclic compound
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0019088 P transformation of host cell by virus
GO:0019860 P uracil metabolic process
GO:0031100 P animal organ regeneration
GO:0032259 P methylation
GO:0032570 P response to progesterone
GO:0033189 P response to vitamin A
GO:0034097 P response to cytokine
GO:0035999 P tetrahydrofolate interconversion
GO:0042493 P response to xenobiotic stimulus
GO:0042803 F protein homodimerization activity
GO:0045471 P response to ethanol
GO:0046078 P dUMP metabolic process
GO:0046653 P tetrahydrofolate metabolic process
GO:0046683 P response to organophosphorus
GO:0048037 F obsolete cofactor binding
GO:0048589 P developmental growth
GO:0051216 P cartilage development
GO:0051384 P response to glucocorticoid
GO:0051593 P response to folic acid
GO:0060574 P intestinal epithelial cell maturation
10526 O_BomoASG19475_5prime_partial:A_BomoASG_c30573_g1_i3
303bp
 thymidylate_synthase_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003729 F mRNA binding
GO:0004799 F thymidylate synthase activity
GO:0005542 F folic acid binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0006206 P pyrimidine nucleobase metabolic process
GO:0006231 P dTMP biosynthetic process
GO:0006235 P dTTP biosynthetic process
GO:0007568 P aging
GO:0007623 P circadian rhythm
GO:0008144 F obsolete drug binding
GO:0008168 F methyltransferase activity
GO:0009165 P nucleotide biosynthetic process
GO:0009636 P response to toxic substance
GO:0014070 P response to organic cyclic compound
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0019088 P transformation of host cell by virus
GO:0019860 P uracil metabolic process
GO:0031100 P animal organ regeneration
GO:0032259 P methylation
GO:0032570 P response to progesterone
GO:0033189 P response to vitamin A
GO:0034097 P response to cytokine
GO:0035999 P tetrahydrofolate interconversion
GO:0042493 P response to xenobiotic stimulus
GO:0042803 F protein homodimerization activity
GO:0045471 P response to ethanol
GO:0046078 P dUMP metabolic process
GO:0046653 P tetrahydrofolate metabolic process
GO:0046683 P response to organophosphorus
GO:0048037 F obsolete cofactor binding
GO:0048589 P developmental growth
GO:0051216 P cartilage development
GO:0051384 P response to glucocorticoid
GO:0051593 P response to folic acid
GO:0060574 P intestinal epithelial cell maturation
10527 O_BomoASG19476_5prime_partial:A_BomoASG_c30574_g1_i1
293bp
 nuclear_pore_complex_protein_Nup88_[Bombyx_mori]
GO:0000055 P ribosomal large subunit export from nucleus
GO:0000056 P ribosomal small subunit export from nucleus
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0006406 P mRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0007067 P mitotic cell cycle
GO:0015031 P protein transport
GO:0051028 P mRNA transport
10528 O_BomoASG19477_3prime_partial:A_BomoASG_c30574_g1_i1
264bp
10529 O_BomoASG19478_complete:A_BomoASG_c30575_g1_i1
712bp
 gastrula_zinc_finger_protein_XlCGF52.1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007275 P multicellular organism development
GO:0046872 F metal ion binding
10530 O_BomoASG19479_complete:A_BomoASG_c30575_g1_i1
175bp
 hypothetical_protein_N320_13019,_partial_[Buceros_rhinoceros_silvestris]
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