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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8551 O_BomoSK17698_complete:A_BomoSK_comp14051_c0_seq9
185bp
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0007286 P spermatid development
GO:0007399 P nervous system development
GO:0007420 P brain development
GO:0016514 C SWI/SNF complex
GO:0016568 P chromatin organization
GO:0043044 P chromatin remodeling
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0047485 F protein N-terminus binding
8552 O_BomoSK17699_complete:A_BomoSK_comp14051_c0_seq9
109bp
8553 O_BomoSK1769_5prime_partial:A_BomoSK_comp4571_c0_seq1
618bp
 PREDICTED:_structural_maintenance_of_chromosomes_protein_4_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0030261 P chromosome condensation
GO:0046982 F protein heterodimerization activity
GO:0051276 P chromosome organization
GO:0051301 P cell division
8554 O_BomoSK176_5prime_partial:A_BomoSK_comp599_c0_seq1
204bp
 hypothetical_protein_KGM_08512_[Danaus_plexippus]
GO:0000070 P mitotic sister chromatid segregation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000922 C spindle pole
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0042177 P negative regulation of protein catabolic process
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043066 P negative regulation of apoptotic process
GO:0045841 P negative regulation of mitotic metaphase/anaphase transition
GO:0045930 P negative regulation of mitotic cell cycle
GO:0048471 C perinuclear region of cytoplasm
GO:0051301 P cell division
GO:0060564 P negative regulation of ubiquitin protein ligase activity
GO:0072686 C mitotic spindle
GO:0090267 P positive regulation of mitotic cell cycle spindle assembly checkpoint
8555 O_BomoSK17700_3prime_partial:A_BomoSK_comp14051_c0_seq10
492bp
GO:0000790 C chromatin
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006337 P nucleosome disassembly
GO:0006338 P chromatin remodeling
GO:0007399 P nervous system development
GO:0008080 F N-acetyltransferase activity
GO:0008152 P metabolic process
GO:0016514 C SWI/SNF complex
GO:0016568 P chromatin organization
GO:0016922 F nuclear receptor binding
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0031492 F nucleosomal DNA binding
GO:0043044 P chromatin remodeling
GO:0043234 C protein-containing complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0047485 F protein N-terminus binding
GO:0071564 C npBAF complex
GO:0071565 C nBAF complex
GO:0090544 C SWI/SNF superfamily-type complex
8556 O_BomoSK17701_5prime_partial:A_BomoSK_comp14051_c0_seq10
218bp
8557 O_BomoSK17702_complete:A_BomoSK_comp14051_c0_seq10
109bp
8558 O_BomoSK17703_complete:A_BomoSK_comp14051_c0_seq10
104bp
8559 O_BomoSK17704_3prime_partial:A_BomoSK_comp14051_c0_seq11
468bp
GO:0000790 C chromatin
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006337 P nucleosome disassembly
GO:0006338 P chromatin remodeling
GO:0007399 P nervous system development
GO:0008080 F N-acetyltransferase activity
GO:0008152 P metabolic process
GO:0016514 C SWI/SNF complex
GO:0016568 P chromatin organization
GO:0016922 F nuclear receptor binding
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0031492 F nucleosomal DNA binding
GO:0043044 P chromatin remodeling
GO:0043234 C protein-containing complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0047485 F protein N-terminus binding
GO:0071564 C npBAF complex
GO:0071565 C nBAF complex
GO:0090544 C SWI/SNF superfamily-type complex
8560 O_BomoSK17705_5prime_partial:A_BomoSK_comp14051_c0_seq11
218bp
8561 O_BomoSK17706_complete:A_BomoSK_comp14051_c0_seq11
104bp
8562 O_BomoSK17707_complete:A_BomoSK_comp14051_c0_seq12
242bp
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0007286 P spermatid development
GO:0007399 P nervous system development
GO:0007420 P brain development
GO:0016514 C SWI/SNF complex
GO:0016568 P chromatin organization
GO:0043044 P chromatin remodeling
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0047485 F protein N-terminus binding
8563 O_BomoSK17708_3prime_partial:A_BomoSK_comp14051_c0_seq12
228bp
GO:0000790 C chromatin
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006337 P nucleosome disassembly
GO:0006338 P chromatin remodeling
GO:0007399 P nervous system development
GO:0008080 F N-acetyltransferase activity
GO:0008152 P metabolic process
GO:0016514 C SWI/SNF complex
GO:0016568 P chromatin organization
GO:0016922 F nuclear receptor binding
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0031492 F nucleosomal DNA binding
GO:0043044 P chromatin remodeling
GO:0043234 C protein-containing complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0047485 F protein N-terminus binding
GO:0071564 C npBAF complex
GO:0071565 C nBAF complex
GO:0090544 C SWI/SNF superfamily-type complex
8564 O_BomoSK17709_5prime_partial:A_BomoSK_comp14051_c0_seq12
218bp
8565 O_BomoSK1770_5prime_partial:A_BomoSK_comp4571_c0_seq1
107bp
 hypothetical_protein_[Xanthophyllomyces_dendrorhous]
8566 O_BomoSK17710_complete:A_BomoSK_comp14051_c0_seq12
109bp
8567 O_BomoSK17711_complete:A_BomoSK_comp14051_c0_seq12
107bp
8568 O_BomoSK17712_complete:A_BomoSK_comp14051_c0_seq12
104bp
8569 O_BomoSK17713_complete:A_BomoSK_comp14051_c0_seq13
207bp
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0007286 P spermatid development
GO:0007399 P nervous system development
GO:0007420 P brain development
GO:0016514 C SWI/SNF complex
GO:0016568 P chromatin organization
GO:0043044 P chromatin remodeling
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0047485 F protein N-terminus binding
8570 O_BomoSK17714_complete:A_BomoSK_comp14051_c0_seq13
109bp
8571 O_BomoSK17715_complete:A_BomoSK_comp14051_c0_seq14
200bp
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0007286 P spermatid development
GO:0007399 P nervous system development
GO:0007420 P brain development
GO:0016514 C SWI/SNF complex
GO:0016568 P chromatin organization
GO:0043044 P chromatin remodeling
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0047485 F protein N-terminus binding
8572 O_BomoSK17716_complete:A_BomoSK_comp14051_c0_seq14
109bp
8573 O_BomoSK17717_complete:A_BomoSK_comp14051_c0_seq14
107bp
8574 O_BomoSK17718_3prime_partial:A_BomoSK_comp14051_c0_seq15
516bp
GO:0000790 C chromatin
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006337 P nucleosome disassembly
GO:0006338 P chromatin remodeling
GO:0007399 P nervous system development
GO:0008080 F N-acetyltransferase activity
GO:0008152 P metabolic process
GO:0016514 C SWI/SNF complex
GO:0016568 P chromatin organization
GO:0016922 F nuclear receptor binding
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0031492 F nucleosomal DNA binding
GO:0043044 P chromatin remodeling
GO:0043234 C protein-containing complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0047485 F protein N-terminus binding
GO:0071564 C npBAF complex
GO:0071565 C nBAF complex
GO:0090544 C SWI/SNF superfamily-type complex
8575 O_BomoSK17719_5prime_partial:A_BomoSK_comp14051_c0_seq15
218bp
8576 O_BomoSK1771_complete:A_BomoSK_comp4572_c0_seq1
120bp
 asparagine_synthetase_B_[Butyrivibrio_proteoclasticus]
8577 O_BomoSK17720_complete:A_BomoSK_comp14051_c0_seq15
109bp
8578 O_BomoSK17721_complete:A_BomoSK_comp14051_c0_seq15
104bp
8579 O_BomoSK17722_3prime_partial:A_BomoSK_comp14051_c0_seq16
531bp
GO:0000790 C chromatin
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006337 P nucleosome disassembly
GO:0006338 P chromatin remodeling
GO:0007399 P nervous system development
GO:0008080 F N-acetyltransferase activity
GO:0008152 P metabolic process
GO:0016514 C SWI/SNF complex
GO:0016568 P chromatin organization
GO:0016922 F nuclear receptor binding
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0031492 F nucleosomal DNA binding
GO:0043044 P chromatin remodeling
GO:0043234 C protein-containing complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0047485 F protein N-terminus binding
GO:0071564 C npBAF complex
GO:0071565 C nBAF complex
GO:0090544 C SWI/SNF superfamily-type complex
8580 O_BomoSK17723_5prime_partial:A_BomoSK_comp14051_c0_seq16
218bp
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