Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
6961	O_BomoSK16266_complete:A_BomoSK_comp13843_c0_seq9 610bp	Bomo_Chr13		GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process GO:0016020 C membrane GO:0016021 C integral component of membrane
6962	O_BomoSK16267_complete:A_BomoSK_comp13843_c0_seq10 734bp	Bomo_Chr13		GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0031214 P biomineral tissue development
6963	O_BomoSK16268_complete:A_BomoSK_comp13843_c0_seq11 791bp	Bomo_Chr13		GO:0003674 F molecular_function GO:0008150 P biological_process GO:0016020 C membrane GO:0016021 C integral component of membrane
6964	O_BomoSK16269_5prime_partial:A_BomoSK_comp13843_c0_seq12 590bp	Bomo_Chr13		GO:0003674 F molecular_function GO:0008150 P biological_process GO:0016020 C membrane GO:0016021 C integral component of membrane
6965	O_BomoSK1626_complete:A_BomoSK_comp4431_c0_seq1 555bp	Bomo_Chr23	PREDICTED:_organic_cation_transporter_protein_isoform_X1_[Bombyx_mori]	GO:0005887 C integral component of plasma membrane GO:0006810 P transport GO:0006811 P ion transport GO:0006915 P apoptotic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0022857 F transmembrane transporter activity GO:0022891 F transmembrane transporter activity GO:0055085 P transmembrane transport
6966	O_BomoSK16270_complete:A_BomoSK_comp13843_c0_seq13 553bp	Bomo_Chr13		GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0031214 P biomineral tissue development
6967	O_BomoSK16271_complete:A_BomoSK_comp13844_c0_seq1 412bp	Bomo_Chr28		GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0007275 P multicellular organism development
6968	O_BomoSK16272_5prime_partial:A_BomoSK_comp13845_c0_seq1 501bp	Bomo_Chr11		GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0046872 F metal ion binding
6969	O_BomoSK16273_5prime_partial:A_BomoSK_comp13845_c0_seq1 127bp	Bomo_Chr11
6970	O_BomoSK16274_complete:A_BomoSK_comp13845_c0_seq1 124bp	Bomo_Chr11
6971	O_BomoSK16275_5prime_partial:A_BomoSK_comp13845_c0_seq2 529bp	Bomo_Scaf071		GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005622 C intracellular anatomical structure GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0046872 F metal ion binding
6972	O_BomoSK16276_5prime_partial:A_BomoSK_comp13845_c0_seq2 127bp	Bomo_Scaf071
6973	O_BomoSK16277_complete:A_BomoSK_comp13845_c0_seq2 124bp	Bomo_Scaf071
6974	O_BomoSK16278_3prime_partial:A_BomoSK_comp13845_c1_seq1 123bp	Bomo_Chr11
6975	O_BomoSK16279_5prime_partial:A_BomoSK_comp13845_c1_seq1 116bp	Bomo_Chr11
6976	O_BomoSK1627_internal:A_BomoSK_comp4434_c0_seq1 240bp	Bomo_Chr7	PREDICTED:_trithorax_group_protein_osa_[Bombyx_mori]	GO:0003677 F DNA binding GO:0003713 F transcription coactivator activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0006338 P chromatin remodeling GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0007275 P multicellular organism development GO:0007379 P segment specification GO:0007406 P negative regulation of neuroblast proliferation GO:0007476 P imaginal disc-derived wing morphogenesis GO:0007480 P imaginal disc-derived leg morphogenesis GO:0008586 P imaginal disc-derived wing vein morphogenesis GO:0008587 P imaginal disc-derived wing margin morphogenesis GO:0014017 P neuroblast fate commitment GO:0016055 P Wnt signaling pathway GO:0016568 P chromatin organization GO:0019233 P sensory perception of pain GO:0022008 P neurogenesis GO:0035060 C brahma complex GO:0042058 P regulation of epidermal growth factor receptor signaling pathway GO:0045893 P positive regulation of transcription, DNA-templated GO:0046530 P photoreceptor cell differentiation GO:0048190 P wing disc dorsal/ventral pattern formation GO:0090544 C SWI/SNF superfamily-type complex
6977	O_BomoSK16280_5prime_partial:A_BomoSK_comp13847_c0_seq1 689bp	Bomo_Chr18		GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0003730 F mRNA 3'-UTR binding GO:0004652 F polynucleotide adenylyltransferase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex GO:0006378 P mRNA polyadenylation GO:0006397 P mRNA processing GO:0016180 P snRNA processing GO:0016607 C nuclear speck GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0046872 F metal ion binding GO:0050265 F RNA uridylyltransferase activity GO:0071044 P histone mRNA catabolic process GO:0098789 P pre-mRNA cleavage required for polyadenylation
6978	O_BomoSK16281_complete:A_BomoSK_comp13847_c0_seq2 807bp	Bomo_Chr18		GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0003730 F mRNA 3'-UTR binding GO:0004652 F polynucleotide adenylyltransferase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex GO:0006378 P mRNA polyadenylation GO:0006397 P mRNA processing GO:0016180 P snRNA processing GO:0016607 C nuclear speck GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0046872 F metal ion binding GO:0050265 F RNA uridylyltransferase activity GO:0071044 P histone mRNA catabolic process GO:0098789 P pre-mRNA cleavage required for polyadenylation
6979	O_BomoSK16282_complete:A_BomoSK_comp13847_c0_seq2 190bp	Bomo_Chr18
6980	O_BomoSK16283_complete:A_BomoSK_comp13847_c0_seq2 105bp	Bomo_Chr18
6981	O_BomoSK16284_complete:A_BomoSK_comp13847_c0_seq3 807bp	Bomo_Chr18		GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0003730 F mRNA 3'-UTR binding GO:0004652 F polynucleotide adenylyltransferase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex GO:0006378 P mRNA polyadenylation GO:0006397 P mRNA processing GO:0016180 P snRNA processing GO:0016607 C nuclear speck GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0046872 F metal ion binding GO:0050265 F RNA uridylyltransferase activity GO:0071044 P histone mRNA catabolic process GO:0098789 P pre-mRNA cleavage required for polyadenylation
6982	O_BomoSK16285_complete:A_BomoSK_comp13847_c0_seq3 190bp	Bomo_Chr18
6983	O_BomoSK16286_complete:A_BomoSK_comp13847_c0_seq3 111bp	Bomo_Chr18
6984	O_BomoSK16287_complete:A_BomoSK_comp13848_c0_seq1 358bp	Bomo_Chr20		GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0003729 F mRNA binding GO:0005634 C nucleus GO:0006397 P mRNA processing GO:0007173 P epidermal growth factor receptor signaling pathway GO:0008380 P RNA splicing GO:0043484 P regulation of RNA splicing
6985	O_BomoSK16288_complete:A_BomoSK_comp13848_c0_seq1 125bp	Bomo_Chr20
6986	O_BomoSK16289_3prime_partial:A_BomoSK_comp13849_c0_seq1 1640bp	Bomo_Chr25		GO:0046872 F metal ion binding
6987	O_BomoSK1628_5prime_partial:A_BomoSK_comp4434_c0_seq1 157bp	Bomo_Chr7
6988	O_BomoSK16290_complete:A_BomoSK_comp13849_c0_seq1 118bp	Bomo_Chr25
6989	O_BomoSK16291_complete:A_BomoSK_comp13849_c0_seq2 1636bp	Bomo_Chr25		GO:0046872 F metal ion binding
6990	O_BomoSK16292_complete:A_BomoSK_comp13849_c0_seq2 118bp	Bomo_Chr25