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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6931 O_BomoSK16239_complete:A_BomoSK_comp13837_c0_seq4
281bp
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005779 C integral component of peroxisomal membrane
GO:0007031 P peroxisome organization
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
6932 O_BomoSK1623_5prime_partial:A_BomoSK_comp4427_c0_seq1
105bp
 PREDICTED:_V-type_proton_ATPase_116_kDa_subunit_a_isoform_3_isoform_X4_[Homo_sapiens]
6933 O_BomoSK16240_complete:A_BomoSK_comp13838_c0_seq2
368bp
GO:0001561 P fatty acid alpha-oxidation
GO:0003824 F catalytic activity
GO:0003973 F (S)-2-hydroxy-acid oxidase activity
GO:0005102 F signaling receptor binding
GO:0005777 C peroxisome
GO:0005782 C peroxisomal matrix
GO:0006979 P response to oxidative stress
GO:0008891 F (S)-2-hydroxy-acid oxidase activity
GO:0010181 F FMN binding
GO:0016491 F oxidoreductase activity
GO:0046296 P glycolate catabolic process
GO:0046487 P glyoxylate metabolic process
GO:0047969 F glyoxylate oxidase activity
GO:0052852 F (S)-2-hydroxy-acid oxidase activity
GO:0052853 F (S)-2-hydroxy-acid oxidase activity
GO:0052854 F (S)-2-hydroxy-acid oxidase activity
GO:0055114 P obsolete oxidation-reduction process
6934 O_BomoSK16241_complete:A_BomoSK_comp13838_c0_seq3
264bp
GO:0001561 P fatty acid alpha-oxidation
GO:0003824 F catalytic activity
GO:0003973 F (S)-2-hydroxy-acid oxidase activity
GO:0005102 F signaling receptor binding
GO:0005777 C peroxisome
GO:0005782 C peroxisomal matrix
GO:0006979 P response to oxidative stress
GO:0008891 F (S)-2-hydroxy-acid oxidase activity
GO:0010181 F FMN binding
GO:0016491 F oxidoreductase activity
GO:0046296 P glycolate catabolic process
GO:0046487 P glyoxylate metabolic process
GO:0047969 F glyoxylate oxidase activity
GO:0052852 F (S)-2-hydroxy-acid oxidase activity
GO:0052853 F (S)-2-hydroxy-acid oxidase activity
GO:0052854 F (S)-2-hydroxy-acid oxidase activity
GO:0055114 P obsolete oxidation-reduction process
6935 O_BomoSK16242_complete:A_BomoSK_comp13838_c0_seq6
297bp
GO:0001561 P fatty acid alpha-oxidation
GO:0003824 F catalytic activity
GO:0003973 F (S)-2-hydroxy-acid oxidase activity
GO:0005102 F signaling receptor binding
GO:0005777 C peroxisome
GO:0005782 C peroxisomal matrix
GO:0006979 P response to oxidative stress
GO:0008891 F (S)-2-hydroxy-acid oxidase activity
GO:0010181 F FMN binding
GO:0016491 F oxidoreductase activity
GO:0046296 P glycolate catabolic process
GO:0046487 P glyoxylate metabolic process
GO:0047969 F glyoxylate oxidase activity
GO:0052852 F (S)-2-hydroxy-acid oxidase activity
GO:0052853 F (S)-2-hydroxy-acid oxidase activity
GO:0052854 F (S)-2-hydroxy-acid oxidase activity
GO:0055114 P obsolete oxidation-reduction process
6936 O_BomoSK16243_3prime_partial:A_BomoSK_comp13839_c1_seq1
576bp
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003726 F double-stranded RNA adenosine deaminase activity
GO:0004000 F adenosine deaminase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006382 P adenosine to inosine editing
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0007420 P brain development
GO:0008285 P negative regulation of cell population proliferation
GO:0016553 P base conversion or substitution editing
GO:0016556 P mRNA modification
GO:0016787 F hydrolase activity
GO:0030336 P negative regulation of cell migration
GO:0042803 F protein homodimerization activity
GO:0044387 P negative regulation of protein kinase activity by regulation of protein phosphorylation
GO:0045070 P positive regulation of viral genome replication
GO:0046872 F metal ion binding
GO:0050685 P positive regulation of mRNA processing
GO:0051726 P regulation of cell cycle
6937 O_BomoSK16244_complete:A_BomoSK_comp13839_c1_seq1
135bp
6938 O_BomoSK16245_complete:A_BomoSK_comp13839_c1_seq1
114bp
6939 O_BomoSK16246_3prime_partial:A_BomoSK_comp13839_c1_seq2
576bp
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003726 F double-stranded RNA adenosine deaminase activity
GO:0004000 F adenosine deaminase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006382 P adenosine to inosine editing
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0007420 P brain development
GO:0008285 P negative regulation of cell population proliferation
GO:0016553 P base conversion or substitution editing
GO:0016556 P mRNA modification
GO:0016787 F hydrolase activity
GO:0030336 P negative regulation of cell migration
GO:0042803 F protein homodimerization activity
GO:0044387 P negative regulation of protein kinase activity by regulation of protein phosphorylation
GO:0045070 P positive regulation of viral genome replication
GO:0046872 F metal ion binding
GO:0050685 P positive regulation of mRNA processing
GO:0051726 P regulation of cell cycle
6940 O_BomoSK16247_complete:A_BomoSK_comp13839_c1_seq2
135bp
6941 O_BomoSK16248_complete:A_BomoSK_comp13839_c1_seq2
114bp
6942 O_BomoSK16249_internal:A_BomoSK_comp13839_c1_seq4
532bp
GO:0003723 F RNA binding
GO:0004000 F adenosine deaminase activity
GO:0005634 C nucleus
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
6943 O_BomoSK1624_3prime_partial:A_BomoSK_comp4427_c1_seq1
404bp
 PREDICTED:_V-type_proton_ATPase_116_kDa_subunit_a_isoform_1_[Papilio_xuthus]
GO:0000220 C vacuolar proton-transporting V-type ATPase, V0 domain
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0033179 C proton-transporting V-type ATPase, V0 domain
GO:0042470 C melanosome
6944 O_BomoSK16250_5prime_partial:A_BomoSK_comp13839_c1_seq4
112bp
6945 O_BomoSK16251_3prime_partial:A_BomoSK_comp13839_c1_seq5
576bp
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003726 F double-stranded RNA adenosine deaminase activity
GO:0004000 F adenosine deaminase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006382 P adenosine to inosine editing
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0007420 P brain development
GO:0008285 P negative regulation of cell population proliferation
GO:0016553 P base conversion or substitution editing
GO:0016556 P mRNA modification
GO:0016787 F hydrolase activity
GO:0030336 P negative regulation of cell migration
GO:0042803 F protein homodimerization activity
GO:0044387 P negative regulation of protein kinase activity by regulation of protein phosphorylation
GO:0045070 P positive regulation of viral genome replication
GO:0046872 F metal ion binding
GO:0050685 P positive regulation of mRNA processing
GO:0051726 P regulation of cell cycle
6946 O_BomoSK16252_complete:A_BomoSK_comp13839_c1_seq5
135bp
6947 O_BomoSK16253_complete:A_BomoSK_comp13839_c1_seq5
114bp
6948 O_BomoSK16254_internal:A_BomoSK_comp13839_c1_seq6
519bp
GO:0002376 P immune system process
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003726 F double-stranded RNA adenosine deaminase activity
GO:0003729 F mRNA binding
GO:0004000 F adenosine deaminase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006382 P adenosine to inosine editing
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008285 P negative regulation of cell population proliferation
GO:0016553 P base conversion or substitution editing
GO:0016787 F hydrolase activity
GO:0030336 P negative regulation of cell migration
GO:0044387 P negative regulation of protein kinase activity by regulation of protein phosphorylation
GO:0044822 F RNA binding
GO:0045070 P positive regulation of viral genome replication
GO:0045087 P innate immune response
GO:0046872 F metal ion binding
GO:0051607 P defense response to virus
GO:0051726 P regulation of cell cycle
6949 O_BomoSK16255_5prime_partial:A_BomoSK_comp13839_c1_seq6
112bp
6950 O_BomoSK16256_5prime_partial:A_BomoSK_comp13840_c0_seq1
105bp
6951 O_BomoSK16257_5prime_partial:A_BomoSK_comp13840_c0_seq2
104bp
6952 O_BomoSK16258_complete:A_BomoSK_comp13843_c0_seq1
797bp
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
6953 O_BomoSK16259_5prime_partial:A_BomoSK_comp13843_c0_seq2
533bp
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031214 P biomineral tissue development
6954 O_BomoSK1625_3prime_partial:A_BomoSK_comp4429_c0_seq1
505bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_3-like_[Amyelois_transitella]
GO:0000278 P mitotic cell cycle
GO:0000790 C chromatin
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0031647 P regulation of protein stability
GO:0036459 F thiol-dependent deubiquitinase
GO:0042393 F histone binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
6955 O_BomoSK16260_complete:A_BomoSK_comp13843_c0_seq3
740bp
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031214 P biomineral tissue development
6956 O_BomoSK16261_5prime_partial:A_BomoSK_comp13843_c0_seq4
409bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
6957 O_BomoSK16262_5prime_partial:A_BomoSK_comp13843_c0_seq5
352bp
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031214 P biomineral tissue development
6958 O_BomoSK16263_complete:A_BomoSK_comp13843_c0_seq6
616bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
6959 O_BomoSK16264_complete:A_BomoSK_comp13843_c0_seq7
179bp
GO:0016020 C membrane
GO:0016021 C integral component of membrane
6960 O_BomoSK16265_complete:A_BomoSK_comp13843_c0_seq8
559bp
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031214 P biomineral tissue development
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