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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6571 O_BomoSK15915_complete:A_BomoSK_comp13784_c0_seq2
113bp
6572 O_BomoSK15916_complete:A_BomoSK_comp13784_c0_seq2
110bp
6573 O_BomoSK15917_complete:A_BomoSK_comp13785_c0_seq1
210bp
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0050873 P brown fat cell differentiation
6574 O_BomoSK15918_5prime_partial:A_BomoSK_comp13786_c0_seq1
371bp
GO:0000166 F nucleotide binding
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0016787 F hydrolase activity
GO:0031047 P gene silencing by RNA
GO:0035279 P miRNA-mediated gene silencing by mRNA destabilization
6575 O_BomoSK15919_3prime_partial:A_BomoSK_comp13786_c0_seq1
113bp
6576 O_BomoSK1591_5prime_partial:A_BomoSK_comp4393_c0_seq2
611bp
 putative_gtpase_[Operophtera_brumata]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006915 P apoptotic process
GO:0010941 P regulation of cell death
GO:0016020 C membrane
GO:0031314 C extrinsic component of mitochondrial inner membrane
GO:0032543 P mitochondrial translation
GO:0042254 P ribosome biogenesis
GO:0043457 P regulation of cellular respiration
GO:0044822 F RNA binding
6577 O_BomoSK15920_internal:A_BomoSK_comp13786_c1_seq2
492bp
GO:0000166 F nucleotide binding
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0016787 F hydrolase activity
GO:0031047 P gene silencing by RNA
GO:0035279 P miRNA-mediated gene silencing by mRNA destabilization
6578 O_BomoSK15921_5prime_partial:A_BomoSK_comp13787_c0_seq1
117bp
6579 O_BomoSK15922_5prime_partial:A_BomoSK_comp13788_c0_seq1
757bp
GO:0000166 F nucleotide binding
GO:0005216 F ion channel activity
GO:0005247 F voltage-gated chloride channel activity
GO:0005524 F ATP binding
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006821 P chloride transport
GO:0012506 C vesicle membrane
GO:0015297 F antiporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030165 F PDZ domain binding
GO:0030658 C transport vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0031902 C late endosome membrane
GO:0034220 P ion transmembrane transport
GO:0055085 P transmembrane transport
GO:1903959 P regulation of anion transmembrane transport
6580 O_BomoSK15923_complete:A_BomoSK_comp13788_c0_seq1
139bp
6581 O_BomoSK15924_5prime_partial:A_BomoSK_comp13788_c0_seq2
799bp
GO:0000166 F nucleotide binding
GO:0005216 F ion channel activity
GO:0005247 F voltage-gated chloride channel activity
GO:0005524 F ATP binding
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006821 P chloride transport
GO:0012506 C vesicle membrane
GO:0015297 F antiporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030165 F PDZ domain binding
GO:0030658 C transport vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0031902 C late endosome membrane
GO:0034220 P ion transmembrane transport
GO:0055085 P transmembrane transport
GO:1903959 P regulation of anion transmembrane transport
6582 O_BomoSK15925_complete:A_BomoSK_comp13788_c0_seq2
139bp
6583 O_BomoSK15926_complete:A_BomoSK_comp13789_c0_seq1
430bp
GO:0003333 P amino acid transmembrane transport
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
6584 O_BomoSK15927_complete:A_BomoSK_comp13789_c0_seq1
114bp
6585 O_BomoSK15928_complete:A_BomoSK_comp13789_c0_seq1
100bp
6586 O_BomoSK15929_complete:A_BomoSK_comp13789_c0_seq2
430bp
GO:0003333 P amino acid transmembrane transport
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
6587 O_BomoSK1592_complete:A_BomoSK_comp4393_c0_seq2
123bp
 PREDICTED:_protein_crumbs_[Bombyx_mori]
6588 O_BomoSK15930_complete:A_BomoSK_comp13789_c0_seq2
114bp
6589 O_BomoSK15931_complete:A_BomoSK_comp13789_c0_seq2
100bp
6590 O_BomoSK15932_complete:A_BomoSK_comp13789_c0_seq3
421bp
GO:0003333 P amino acid transmembrane transport
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
6591 O_BomoSK15933_complete:A_BomoSK_comp13789_c0_seq3
100bp
6592 O_BomoSK15934_complete:A_BomoSK_comp13789_c0_seq4
421bp
GO:0003333 P amino acid transmembrane transport
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
6593 O_BomoSK15935_complete:A_BomoSK_comp13789_c0_seq4
100bp
6594 O_BomoSK15936_complete:A_BomoSK_comp13789_c0_seq5
397bp
GO:0003333 P amino acid transmembrane transport
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
6595 O_BomoSK15937_complete:A_BomoSK_comp13789_c0_seq5
100bp
6596 O_BomoSK15938_complete:A_BomoSK_comp13789_c0_seq6
397bp
GO:0003333 P amino acid transmembrane transport
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
6597 O_BomoSK15939_complete:A_BomoSK_comp13789_c0_seq6
100bp
6598 O_BomoSK1593_complete:A_BomoSK_comp4395_c0_seq1
118bp
 BTB/POZ_domain-containing_protein_[Morus_notabilis]
6599 O_BomoSK15940_5prime_partial:A_BomoSK_comp13791_c0_seq1
181bp
GO:0002376 P immune system process
GO:0005576 C extracellular region
GO:0042742 P defense response to bacterium
GO:0045087 P innate immune response
6600 O_BomoSK15941_complete:A_BomoSK_comp13791_c0_seq2
174bp
GO:0002376 P immune system process
GO:0005576 C extracellular region
GO:0042742 P defense response to bacterium
GO:0045087 P innate immune response
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