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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6511 O_BomoSK15861_complete:A_BomoSK_comp13768_c0_seq2
112bp
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0048471 C perinuclear region of cytoplasm
6512 O_BomoSK15862_3prime_partial:A_BomoSK_comp13770_c1_seq2
1103bp
6513 O_BomoSK15863_complete:A_BomoSK_comp13770_c1_seq2
254bp
6514 O_BomoSK15864_complete:A_BomoSK_comp13770_c1_seq2
138bp
6515 O_BomoSK15865_5prime_partial:A_BomoSK_comp13770_c1_seq2
132bp
6516 O_BomoSK15866_complete:A_BomoSK_comp13770_c1_seq2
109bp
6517 O_BomoSK15867_complete:A_BomoSK_comp13770_c1_seq2
108bp
6518 O_BomoSK15868_3prime_partial:A_BomoSK_comp13770_c1_seq3
1165bp
6519 O_BomoSK15869_complete:A_BomoSK_comp13770_c1_seq3
254bp
6520 O_BomoSK1586_5prime_partial:A_BomoSK_comp4391_c0_seq1
110bp
 MULTISPECIES:_hypothetical_protein_[Chlamydiales]
6521 O_BomoSK15870_complete:A_BomoSK_comp13770_c1_seq3
138bp
6522 O_BomoSK15871_complete:A_BomoSK_comp13770_c1_seq3
109bp
6523 O_BomoSK15872_complete:A_BomoSK_comp13770_c1_seq3
108bp
6524 O_BomoSK15873_complete:A_BomoSK_comp13772_c0_seq1
354bp
GO:0000166 F nucleotide binding
GO:0001664 F G protein-coupled receptor binding
GO:0003924 F GTPase activity
GO:0004871 F obsolete signal transducer activity
GO:0005525 F GTP binding
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0008152 P metabolic process
GO:0019001 F guanyl nucleotide binding
GO:0031683 F G-protein beta/gamma-subunit complex binding
GO:0046872 F metal ion binding
6525 O_BomoSK15874_complete:A_BomoSK_comp13772_c0_seq1
136bp
6526 O_BomoSK15875_complete:A_BomoSK_comp13773_c0_seq1
432bp
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007224 P smoothened signaling pathway
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0019233 P sensory perception of pain
GO:0030111 P regulation of Wnt signaling pathway
GO:0030510 P regulation of BMP signaling pathway
GO:0030904 C retromer complex
GO:0030906 C retromer, cargo-selective complex
GO:0042147 P retrograde transport, endosome to Golgi
6527 O_BomoSK15876_complete:A_BomoSK_comp13774_c1_seq1
724bp
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
6528 O_BomoSK15877_complete:A_BomoSK_comp13774_c1_seq1
158bp
6529 O_BomoSK15878_complete:A_BomoSK_comp13775_c0_seq1
515bp
6530 O_BomoSK15879_complete:A_BomoSK_comp13775_c0_seq1
122bp
6531 O_BomoSK1587_3prime_partial:A_BomoSK_comp4392_c0_seq1
604bp
 PREDICTED:_WD_repeat-containing_protein_46_[Papilio_machaon]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0030686 C 90S preribosome
GO:0032040 C small-subunit processome
GO:0044822 F RNA binding
GO:1903955 P positive regulation of protein targeting to mitochondrion
6532 O_BomoSK15880_complete:A_BomoSK_comp13775_c0_seq2
847bp
GO:0001664 F G protein-coupled receptor binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0008150 P biological_process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0050780 F dopamine receptor binding
GO:0070062 C extracellular exosome
6533 O_BomoSK15881_complete:A_BomoSK_comp13775_c0_seq2
122bp
6534 O_BomoSK15882_complete:A_BomoSK_comp13776_c0_seq1
465bp
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
6535 O_BomoSK15883_complete:A_BomoSK_comp13776_c0_seq1
110bp
6536 O_BomoSK15884_3prime_partial:A_BomoSK_comp13777_c0_seq1
392bp
GO:0000049 F tRNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0031047 P gene silencing by RNA
GO:0035281 P pre-miRNA export from nucleus
GO:0042565 C RNA nuclear export complex
GO:0044822 F RNA binding
GO:0070883 F pre-miRNA binding
GO:0090631 F nucleocytoplasmic carrier activity
GO:1900370 P positive regulation of RNA interference
6537 O_BomoSK15885_3prime_partial:A_BomoSK_comp13777_c0_seq2
392bp
GO:0000049 F tRNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0031047 P gene silencing by RNA
GO:0035281 P pre-miRNA export from nucleus
GO:0042565 C RNA nuclear export complex
GO:0044822 F RNA binding
GO:0070883 F pre-miRNA binding
GO:0090631 F nucleocytoplasmic carrier activity
GO:1900370 P positive regulation of RNA interference
6538 O_BomoSK15886_internal:A_BomoSK_comp13777_c0_seq3
430bp
GO:0000049 F tRNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0031047 P gene silencing by RNA
GO:0035281 P pre-miRNA export from nucleus
GO:0042565 C RNA nuclear export complex
GO:0044822 F RNA binding
GO:0070883 F pre-miRNA binding
GO:0090631 F nucleocytoplasmic carrier activity
GO:1900370 P positive regulation of RNA interference
6539 O_BomoSK15887_3prime_partial:A_BomoSK_comp13777_c0_seq4
392bp
GO:0000049 F tRNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0031047 P gene silencing by RNA
GO:0035281 P pre-miRNA export from nucleus
GO:0042565 C RNA nuclear export complex
GO:0044822 F RNA binding
GO:0070883 F pre-miRNA binding
GO:0090631 F nucleocytoplasmic carrier activity
GO:1900370 P positive regulation of RNA interference
6540 O_BomoSK15888_complete:A_BomoSK_comp13778_c1_seq1
185bp
GO:0005737 C cytoplasm
GO:0006099 P tricarboxylic acid cycle
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0030060 F L-malate dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
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