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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6481 O_BomoSK15834_3prime_partial:A_BomoSK_comp13756_c0_seq3
1032bp
GO:0003824 F catalytic activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005886 C plasma membrane
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0006468 P protein phosphorylation
GO:0008607 F phosphorylase kinase regulator activity
GO:0016020 C membrane
GO:0045859 P regulation of protein kinase activity
6482 O_BomoSK15835_complete:A_BomoSK_comp13756_c0_seq3
100bp
6483 O_BomoSK15836_3prime_partial:A_BomoSK_comp13756_c0_seq4
933bp
GO:0003824 F catalytic activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005886 C plasma membrane
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0006468 P protein phosphorylation
GO:0008607 F phosphorylase kinase regulator activity
GO:0016020 C membrane
GO:0045859 P regulation of protein kinase activity
6484 O_BomoSK15837_complete:A_BomoSK_comp13756_c0_seq4
100bp
6485 O_BomoSK15838_complete:A_BomoSK_comp13756_c0_seq5
481bp
GO:0003824 F catalytic activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005886 C plasma membrane
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0006468 P protein phosphorylation
GO:0008607 F phosphorylase kinase regulator activity
GO:0016020 C membrane
GO:0045859 P regulation of protein kinase activity
6486 O_BomoSK15839_complete:A_BomoSK_comp13758_c1_seq4
400bp
GO:0005267 F potassium channel activity
GO:0005272 F sodium channel activity
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0016324 C apical plasma membrane
GO:0022841 F potassium ion leak channel activity
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0034705 C potassium channel complex
GO:0035725 P sodium ion transmembrane transport
GO:0042995 C cell projection
GO:0043204 C perikaryon
GO:0045202 C synapse
GO:0055037 C recycling endosome
GO:0060075 P regulation of resting membrane potential
GO:0071805 P potassium ion transmembrane transport
6487 O_BomoSK1583_complete:A_BomoSK_comp4388_c0_seq1
124bp
 hypothetical_protein_ALC56_01162_[Trachymyrmex_septentrionalis]
6488 O_BomoSK15840_complete:A_BomoSK_comp13758_c1_seq4
154bp
6489 O_BomoSK15841_complete:A_BomoSK_comp13759_c1_seq1
102bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
6490 O_BomoSK15842_internal:A_BomoSK_comp13760_c0_seq1
130bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007380 P specification of segmental identity, head
GO:0010468 P regulation of gene expression
GO:0046872 F metal ion binding
GO:0048730 P epidermis morphogenesis
GO:0048749 P compound eye development
GO:0061330 P Malpighian tubule stellate cell differentiation
6491 O_BomoSK15843_internal:A_BomoSK_comp13760_c0_seq1
129bp
6492 O_BomoSK15844_internal:A_BomoSK_comp13760_c0_seq2
143bp
6493 O_BomoSK15845_5prime_partial:A_BomoSK_comp13760_c0_seq2
115bp
6494 O_BomoSK15846_3prime_partial:A_BomoSK_comp13760_c0_seq3
928bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007380 P specification of segmental identity, head
GO:0010468 P regulation of gene expression
GO:0046872 F metal ion binding
GO:0048730 P epidermis morphogenesis
GO:0048749 P compound eye development
GO:0061330 P Malpighian tubule stellate cell differentiation
6495 O_BomoSK15847_complete:A_BomoSK_comp13760_c0_seq3
107bp
6496 O_BomoSK15848_5prime_partial:A_BomoSK_comp13761_c1_seq1
211bp
6497 O_BomoSK15849_complete:A_BomoSK_comp13761_c1_seq2
612bp
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
6498 O_BomoSK1584_complete:A_BomoSK_comp4388_c0_seq1
100bp
6499 O_BomoSK15850_complete:A_BomoSK_comp13761_c1_seq3
810bp
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
6500 O_BomoSK15851_complete:A_BomoSK_comp13762_c0_seq1
332bp
GO:0003824 F catalytic activity
GO:0004084 F branched-chain-amino-acid transaminase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0008152 P metabolic process
GO:0008483 F transaminase activity
GO:0008652 P cellular amino acid biosynthetic process
GO:0009081 P branched-chain amino acid metabolic process
GO:0009082 P branched-chain amino acid biosynthetic process
GO:0009083 P branched-chain amino acid catabolic process
GO:0016740 F transferase activity
GO:0031571 P mitotic G1 DNA damage checkpoint signaling
GO:0034644 P cellular response to UV
GO:0052654 F L-leucine transaminase activity
GO:0052655 F L-valine transaminase activity
GO:0052656 F L-isoleucine transaminase activity
6501 O_BomoSK15852_complete:A_BomoSK_comp13762_c0_seq1
115bp
6502 O_BomoSK15853_complete:A_BomoSK_comp13762_c0_seq2
427bp
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0003824 F catalytic activity
GO:0004084 F branched-chain-amino-acid transaminase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008152 P metabolic process
GO:0008283 P cell population proliferation
GO:0008483 F transaminase activity
GO:0008652 P cellular amino acid biosynthetic process
GO:0009081 P branched-chain amino acid metabolic process
GO:0009082 P branched-chain amino acid biosynthetic process
GO:0009083 P branched-chain amino acid catabolic process
GO:0016740 F transferase activity
GO:0042802 F identical protein binding
GO:0052654 F L-leucine transaminase activity
GO:0052655 F L-valine transaminase activity
GO:0052656 F L-isoleucine transaminase activity
6503 O_BomoSK15854_complete:A_BomoSK_comp13762_c0_seq2
115bp
6504 O_BomoSK15855_5prime_partial:A_BomoSK_comp13763_c0_seq1
184bp
6505 O_BomoSK15856_3prime_partial:A_BomoSK_comp13764_c0_seq1
733bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008180 C COP9 signalosome
GO:0016032 P viral process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016567 P protein ubiquitination
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0030183 P B cell differentiation
GO:0033151 P V(D)J recombination
GO:0035212 P cell competition in a multicellular organism
GO:1990244 F histone kinase activity (H2A-T120 specific)
GO:1990245 P histone H2A-T120 phosphorylation
6506 O_BomoSK15857_internal:A_BomoSK_comp13764_c0_seq2
455bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0016567 P protein ubiquitination
GO:0035212 P cell competition in a multicellular organism
6507 O_BomoSK15858_3prime_partial:A_BomoSK_comp13766_c1_seq1
687bp
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000712 P resolution of meiotic recombination intermediates
GO:0000793 C condensed chromosome
GO:0000794 C condensed nuclear chromosome
GO:0000795 C synaptonemal complex
GO:0001673 C male germ cell nucleus
GO:0002204 P somatic recombination of immunoglobulin genes involved in immune response
GO:0003682 F chromatin binding
GO:0003697 F single-stranded DNA binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005712 C chiasma
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007060 P male meiosis chromosome segregation
GO:0007126 P meiotic cell cycle
GO:0007129 P homologous chromosome pairing at meiosis
GO:0007131 P reciprocal meiotic recombination
GO:0007140 P male meiotic nuclear division
GO:0007283 P spermatogenesis
GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage
GO:0016020 C membrane
GO:0016321 P female meiosis chromosome segregation
GO:0016446 P somatic hypermutation of immunoglobulin genes
GO:0016447 P somatic recombination of immunoglobulin gene segments
GO:0016887 F ATP hydrolysis activity
GO:0030983 F mismatched DNA binding
GO:0032137 F guanine/thymine mispair binding
GO:0032389 C MutLalpha complex
GO:0032407 F MutSalpha complex binding
GO:0043060 P meiotic metaphase I plate congression
GO:0045132 P meiotic chromosome segregation
GO:0045141 P meiotic telomere clustering
GO:0045143 P homologous chromosome segregation
GO:0045190 P isotype switching
GO:0045950 P negative regulation of mitotic recombination
GO:0048477 P oogenesis
GO:0051257 P meiotic spindle midzone assembly
6508 O_BomoSK15859_complete:A_BomoSK_comp13766_c2_seq1
139bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0022008 P neurogenesis
GO:0035079 P polytene chromosome puffing
GO:0044237 P cellular metabolic process
6509 O_BomoSK1585_internal:A_BomoSK_comp4391_c0_seq1
490bp
 PREDICTED:_serine/threonine-protein_kinase_RIO1_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0006364 P rRNA processing
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
6510 O_BomoSK15860_complete:A_BomoSK_comp13768_c0_seq1
112bp
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0048471 C perinuclear region of cytoplasm
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