SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/33939
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6301 O_BomoSK15672_complete:A_BomoSK_comp13727_c0_seq1
103bp
6302 O_BomoSK15673_complete:A_BomoSK_comp13727_c0_seq2
351bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
6303 O_BomoSK15674_complete:A_BomoSK_comp13727_c0_seq2
105bp
6304 O_BomoSK15675_complete:A_BomoSK_comp13727_c0_seq2
103bp
6305 O_BomoSK15676_complete:A_BomoSK_comp13727_c0_seq3
151bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
6306 O_BomoSK15677_complete:A_BomoSK_comp13727_c0_seq4
151bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
6307 O_BomoSK15678_complete:A_BomoSK_comp13727_c0_seq4
105bp
6308 O_BomoSK15679_complete:A_BomoSK_comp13727_c0_seq5
351bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
6309 O_BomoSK1567_5prime_partial:A_BomoSK_comp4367_c0_seq2
110bp
 preprotein_translocase_subunit_SecD_[Pseudomonas_alkylphenolia]
6310 O_BomoSK15680_complete:A_BomoSK_comp13727_c0_seq5
105bp
6311 O_BomoSK15681_complete:A_BomoSK_comp13727_c0_seq5
103bp
6312 O_BomoSK15682_complete:A_BomoSK_comp13727_c0_seq6
315bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0016020 C membrane
6313 O_BomoSK15683_complete:A_BomoSK_comp13727_c0_seq6
105bp
6314 O_BomoSK15684_complete:A_BomoSK_comp13727_c0_seq7
151bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
6315 O_BomoSK15685_complete:A_BomoSK_comp13727_c0_seq7
105bp
6316 O_BomoSK15686_complete:A_BomoSK_comp13727_c0_seq8
151bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
6317 O_BomoSK15687_complete:A_BomoSK_comp13727_c0_seq8
105bp
6318 O_BomoSK15688_complete:A_BomoSK_comp13727_c0_seq9
151bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
6319 O_BomoSK15689_complete:A_BomoSK_comp13727_c0_seq9
105bp
6320 O_BomoSK1568_3prime_partial:A_BomoSK_comp4370_c0_seq1
554bp
 PREDICTED:_DNA_replication_licensing_factor_mcm5_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0000712 P resolution of meiotic recombination intermediates
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0003688 F DNA replication origin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0007126 P meiotic cell cycle
GO:0016787 F hydrolase activity
GO:0030261 P chromosome condensation
GO:0032508 P DNA duplex unwinding
GO:0042023 P DNA endoreduplication
GO:0042555 C MCM complex
GO:0043138 F 3'-5' DNA helicase activity
6321 O_BomoSK15690_complete:A_BomoSK_comp13727_c0_seq10
151bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
6322 O_BomoSK15691_complete:A_BomoSK_comp13727_c0_seq10
105bp
6323 O_BomoSK15692_complete:A_BomoSK_comp13727_c0_seq11
151bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
6324 O_BomoSK15693_complete:A_BomoSK_comp13727_c0_seq11
105bp
6325 O_BomoSK15694_complete:A_BomoSK_comp13727_c0_seq12
351bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
6326 O_BomoSK15695_complete:A_BomoSK_comp13727_c0_seq12
105bp
6327 O_BomoSK15696_complete:A_BomoSK_comp13727_c0_seq12
103bp
6328 O_BomoSK15697_complete:A_BomoSK_comp13727_c0_seq13
351bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
6329 O_BomoSK15698_complete:A_BomoSK_comp13727_c0_seq13
105bp
6330 O_BomoSK15699_complete:A_BomoSK_comp13727_c0_seq13
103bp
previous next from show/33939

- SilkBase 1999-2023 -