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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6271 O_BomoSK15645_3prime_partial:A_BomoSK_comp13721_c0_seq12
131bp
6272 O_BomoSK15646_complete:A_BomoSK_comp13721_c0_seq12
118bp
6273 O_BomoSK15647_complete:A_BomoSK_comp13721_c0_seq12
118bp
6274 O_BomoSK15648_complete:A_BomoSK_comp13721_c1_seq2
1055bp
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
6275 O_BomoSK15649_complete:A_BomoSK_comp13722_c0_seq1
505bp
GO:0008540 C proteasome regulatory particle, base subcomplex
GO:0022624 C proteasome accessory complex
GO:0043248 P proteasome assembly
GO:0070682 P proteasome regulatory particle assembly
6276 O_BomoSK1564_3prime_partial:A_BomoSK_comp4367_c0_seq1
363bp
 PREDICTED:_protein_fem-1_homolog_CG6966_isoform_X2_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005575 C cellular_component
GO:0016567 P protein ubiquitination
GO:0051438 P regulation of ubiquitin-protein transferase activity
6277 O_BomoSK15650_complete:A_BomoSK_comp13722_c0_seq1
105bp
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0031072 F heat shock protein binding
GO:0032781 P positive regulation of ATP-dependent activity
GO:0035176 P social behavior
6278 O_BomoSK15651_complete:A_BomoSK_comp13722_c0_seq3
505bp
GO:0008540 C proteasome regulatory particle, base subcomplex
GO:0022624 C proteasome accessory complex
GO:0043248 P proteasome assembly
GO:0070682 P proteasome regulatory particle assembly
6279 O_BomoSK15652_complete:A_BomoSK_comp13722_c0_seq3
270bp
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0031072 F heat shock protein binding
GO:0032781 P positive regulation of ATP-dependent activity
GO:0035176 P social behavior
6280 O_BomoSK15653_complete:A_BomoSK_comp13723_c0_seq1
264bp
GO:0001558 P regulation of cell growth
GO:0003674 F molecular_function
GO:0004860 F protein kinase inhibitor activity
GO:0005159 F insulin-like growth factor receptor binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0006469 P negative regulation of protein kinase activity
GO:0007568 P aging
GO:0008269 F JAK pathway signal transduction adaptor activity
GO:0009968 P negative regulation of signal transduction
GO:0016567 P protein ubiquitination
GO:0019221 P cytokine-mediated signaling pathway
GO:0035556 P intracellular signal transduction
GO:0040008 P regulation of growth
GO:0043434 P response to peptide hormone
GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT
GO:0046627 P negative regulation of insulin receptor signaling pathway
6281 O_BomoSK15654_complete:A_BomoSK_comp13723_c0_seq2
283bp
GO:0001558 P regulation of cell growth
GO:0003674 F molecular_function
GO:0004860 F protein kinase inhibitor activity
GO:0005159 F insulin-like growth factor receptor binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0006469 P negative regulation of protein kinase activity
GO:0007568 P aging
GO:0008269 F JAK pathway signal transduction adaptor activity
GO:0009968 P negative regulation of signal transduction
GO:0016567 P protein ubiquitination
GO:0019221 P cytokine-mediated signaling pathway
GO:0035556 P intracellular signal transduction
GO:0040008 P regulation of growth
GO:0043434 P response to peptide hormone
GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT
GO:0046627 P negative regulation of insulin receptor signaling pathway
6282 O_BomoSK15655_complete:A_BomoSK_comp13724_c0_seq1
3023bp
GO:0005044 F scavenger receptor activity
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005918 C septate junction
GO:0005923 C bicellular tight junction
GO:0006898 P receptor-mediated endocytosis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030246 F carbohydrate binding
GO:0034976 P response to endoplasmic reticulum stress
GO:0035002 P liquid clearance, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0045217 P cell-cell junction maintenance
GO:0061689 C tricellular tight junction
GO:0090557 P establishment of endothelial intestinal barrier
GO:1904274 P tricellular tight junction assembly
6283 O_BomoSK15656_complete:A_BomoSK_comp13724_c0_seq1
141bp
6284 O_BomoSK15657_complete:A_BomoSK_comp13724_c0_seq1
110bp
6285 O_BomoSK15658_complete:A_BomoSK_comp13724_c0_seq1
100bp
6286 O_BomoSK15659_complete:A_BomoSK_comp13724_c0_seq2
3013bp
GO:0005044 F scavenger receptor activity
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005918 C septate junction
GO:0005923 C bicellular tight junction
GO:0006898 P receptor-mediated endocytosis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030246 F carbohydrate binding
GO:0034976 P response to endoplasmic reticulum stress
GO:0035002 P liquid clearance, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0045217 P cell-cell junction maintenance
GO:0061689 C tricellular tight junction
GO:0090557 P establishment of endothelial intestinal barrier
GO:1904274 P tricellular tight junction assembly
6287 O_BomoSK1565_5prime_partial:A_BomoSK_comp4367_c0_seq1
110bp
 preprotein_translocase_subunit_SecD_[Pseudomonas_alkylphenolia]
6288 O_BomoSK15660_complete:A_BomoSK_comp13724_c0_seq2
141bp
6289 O_BomoSK15661_complete:A_BomoSK_comp13724_c0_seq2
110bp
6290 O_BomoSK15662_complete:A_BomoSK_comp13724_c0_seq2
100bp
6291 O_BomoSK15663_5prime_partial:A_BomoSK_comp13725_c0_seq1
180bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007417 P central nervous system development
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007424 P open tracheal system development
GO:0007425 P epithelial cell fate determination, open tracheal system
GO:0007517 P muscle organ development
GO:0008347 P glial cell migration
GO:0017022 F myosin binding
GO:0032869 P cellular response to insulin stimulus
GO:0043234 C protein-containing complex
GO:0043565 F sequence-specific DNA binding
GO:0045676 P regulation of R7 cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0048477 P oogenesis
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0060173 P limb development
GO:0071456 P cellular response to hypoxia
6292 O_BomoSK15664_complete:A_BomoSK_comp13725_c0_seq1
146bp
6293 O_BomoSK15665_complete:A_BomoSK_comp13726_c0_seq1
295bp
GO:0000166 F nucleotide binding
GO:0001731 P formation of translation preinitiation complex
GO:0002181 P cytoplasmic translation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005844 C polysome
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006446 P regulation of translational initiation
GO:0008135 F translation factor activity, RNA binding
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016281 C eukaryotic translation initiation factor 4F complex
GO:0019953 P sexual reproduction
GO:0033592 F RNA strand annealing activity
GO:0034057 F RNA strand-exchange activity
GO:0043024 F ribosomal small subunit binding
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048589 P developmental growth
GO:0097010 P eukaryotic translation initiation factor 4F complex assembly
6294 O_BomoSK15666_complete:A_BomoSK_comp13726_c0_seq1
151bp
6295 O_BomoSK15667_complete:A_BomoSK_comp13726_c0_seq2
272bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0048471 C perinuclear region of cytoplasm
6296 O_BomoSK15668_complete:A_BomoSK_comp13726_c0_seq2
128bp
6297 O_BomoSK15669_complete:A_BomoSK_comp13726_c0_seq2
119bp
6298 O_BomoSK1566_3prime_partial:A_BomoSK_comp4367_c0_seq2
382bp
 PREDICTED:_protein_fem-1_homolog_CG6966_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005575 C cellular_component
GO:0016567 P protein ubiquitination
GO:0051438 P regulation of ubiquitin-protein transferase activity
6299 O_BomoSK15670_complete:A_BomoSK_comp13727_c0_seq1
351bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
6300 O_BomoSK15671_complete:A_BomoSK_comp13727_c0_seq1
105bp
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