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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
601 O_BomoSK10541_complete:A_BomoSK_comp12241_c0_seq3
111bp
602 O_BomoSK10542_complete:A_BomoSK_comp12241_c0_seq4
270bp
 PREDICTED:_uncharacterized_protein_LOC106129698_[Amyelois_transitella]
603 O_BomoSK10543_5prime_partial:A_BomoSK_comp12241_c0_seq4
152bp
 PREDICTED:_uncharacterized_protein_LOC101736656_[Bombyx_mori]
604 O_BomoSK10544_complete:A_BomoSK_comp12241_c0_seq4
111bp
605 O_BomoSK10545_complete:A_BomoSK_comp12242_c1_seq1
482bp
 PREDICTED:_diacylglycerol_O-acyltransferase_1_isoform_X2_[Bombyx_mori]
GO:0003846 F 2-acylglycerol O-acyltransferase activity
GO:0004144 F diacylglycerol O-acyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008374 F O-acyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019432 P triglyceride biosynthetic process
GO:0019915 P lipid storage
GO:0034379 P very-low-density lipoprotein particle assembly
GO:0035336 P long-chain fatty-acyl-CoA metabolic process
GO:0042572 P retinol metabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0046339 P diacylglycerol metabolic process
GO:0046486 P glycerolipid metabolic process
GO:0050252 F retinol O-fatty-acyltransferase activity
GO:0055089 P fatty acid homeostasis
606 O_BomoSK10546_complete:A_BomoSK_comp12242_c1_seq2
491bp
 PREDICTED:_diacylglycerol_O-acyltransferase_1_isoform_X2_[Bombyx_mori]
GO:0003846 F 2-acylglycerol O-acyltransferase activity
GO:0004144 F diacylglycerol O-acyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008374 F O-acyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019432 P triglyceride biosynthetic process
GO:0019915 P lipid storage
GO:0034379 P very-low-density lipoprotein particle assembly
GO:0035336 P long-chain fatty-acyl-CoA metabolic process
GO:0042572 P retinol metabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0046339 P diacylglycerol metabolic process
GO:0046486 P glycerolipid metabolic process
GO:0050252 F retinol O-fatty-acyltransferase activity
GO:0055089 P fatty acid homeostasis
607 O_BomoSK10547_complete:A_BomoSK_comp12243_c0_seq1
252bp
 isopentenyl-diphosphate_delta_isomerase_[Bombyx_mori]
GO:0004452 F isopentenyl-diphosphate delta-isomerase activity
GO:0005777 C peroxisome
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0006695 P cholesterol biosynthetic process
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016126 P sterol biosynthetic process
GO:0016787 F hydrolase activity
GO:0016853 F isomerase activity
GO:0046872 F metal ion binding
GO:0050992 P dimethylallyl diphosphate biosynthetic process
608 O_BomoSK10548_complete:A_BomoSK_comp12243_c0_seq1
126bp
 hypothetical_protein_[Methylobacterium_sp._L2-4]
609 O_BomoSK10549_complete:A_BomoSK_comp12243_c0_seq2
252bp
 isopentenyl-diphosphate_delta_isomerase_[Bombyx_mori]
GO:0004452 F isopentenyl-diphosphate delta-isomerase activity
GO:0005777 C peroxisome
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0006695 P cholesterol biosynthetic process
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016126 P sterol biosynthetic process
GO:0016787 F hydrolase activity
GO:0016853 F isomerase activity
GO:0046872 F metal ion binding
GO:0050992 P dimethylallyl diphosphate biosynthetic process
610 O_BomoSK1054_3prime_partial:A_BomoSK_comp3842_c0_seq1
178bp
 PREDICTED:_serine/threonine-protein_phosphatase_6_regulatory_subunit_3-B_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0019903 F protein phosphatase binding
GO:0043666 P regulation of phosphoprotein phosphatase activity
611 O_BomoSK10550_complete:A_BomoSK_comp12243_c0_seq2
116bp
 AraC_family_transcriptional_regulator_[Novosphingobium_sp._MBES04]
612 O_BomoSK10551_3prime_partial:A_BomoSK_comp12244_c0_seq1
532bp
 PREDICTED:_uncharacterized_protein_LOC106138667_[Amyelois_transitella]
613 O_BomoSK10552_complete:A_BomoSK_comp12244_c0_seq2
337bp
 PREDICTED:_uncharacterized_protein_LOC106138667_[Amyelois_transitella]
614 O_BomoSK10553_3prime_partial:A_BomoSK_comp12244_c0_seq2
227bp
 PREDICTED:_uncharacterized_protein_LOC106138667_[Amyelois_transitella]
615 O_BomoSK10554_complete:A_BomoSK_comp12245_c1_seq1
696bp
 PREDICTED:_mismatch_repair_endonuclease_PMS2_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007126 P meiotic cell cycle
GO:0015630 C microtubule cytoskeleton
GO:0016446 P somatic hypermutation of immunoglobulin genes
GO:0016447 P somatic recombination of immunoglobulin gene segments
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030983 F mismatched DNA binding
GO:0032138 F single base insertion or deletion binding
GO:0032300 C mismatch repair complex
GO:0032389 C MutLalpha complex
GO:0032407 F MutSalpha complex binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
616 O_BomoSK10555_complete:A_BomoSK_comp12245_c1_seq1
217bp
 PREDICTED:_glutamate-rich_WD_repeat-containing_protein_1_[Papilio_polytes]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0044822 F RNA binding
617 O_BomoSK10556_complete:A_BomoSK_comp12245_c1_seq1
130bp
 Chromatin_assembly_factor_1_subunit_[Operophtera_brumata]
618 O_BomoSK10557_complete:A_BomoSK_comp12245_c1_seq2
875bp
 PREDICTED:_mismatch_repair_endonuclease_PMS2_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007126 P meiotic cell cycle
GO:0015630 C microtubule cytoskeleton
GO:0016446 P somatic hypermutation of immunoglobulin genes
GO:0016447 P somatic recombination of immunoglobulin gene segments
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030983 F mismatched DNA binding
GO:0032138 F single base insertion or deletion binding
GO:0032300 C mismatch repair complex
GO:0032389 C MutLalpha complex
GO:0032407 F MutSalpha complex binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
619 O_BomoSK10558_complete:A_BomoSK_comp12245_c1_seq2
217bp
 PREDICTED:_glutamate-rich_WD_repeat-containing_protein_1_[Papilio_polytes]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0044822 F RNA binding
620 O_BomoSK10559_complete:A_BomoSK_comp12245_c1_seq2
130bp
 Chromatin_assembly_factor_1_subunit_[Operophtera_brumata]
621 O_BomoSK1055_complete:A_BomoSK_comp3842_c0_seq1
134bp
 PREDICTED:_serine/threonine-protein_phosphatase_6_regulatory_subunit_3-B_[Bombyx_mori]
622 O_BomoSK10560_complete:A_BomoSK_comp12245_c1_seq3
696bp
 PREDICTED:_mismatch_repair_endonuclease_PMS2_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007126 P meiotic cell cycle
GO:0015630 C microtubule cytoskeleton
GO:0016446 P somatic hypermutation of immunoglobulin genes
GO:0016447 P somatic recombination of immunoglobulin gene segments
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030983 F mismatched DNA binding
GO:0032138 F single base insertion or deletion binding
GO:0032300 C mismatch repair complex
GO:0032389 C MutLalpha complex
GO:0032407 F MutSalpha complex binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
623 O_BomoSK10561_complete:A_BomoSK_comp12245_c1_seq3
445bp
 PREDICTED:_glutamate-rich_WD_repeat-containing_protein_1_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0044822 F RNA binding
624 O_BomoSK10562_complete:A_BomoSK_comp12245_c1_seq3
130bp
 Chromatin_assembly_factor_1_subunit_[Operophtera_brumata]
625 O_BomoSK10563_complete:A_BomoSK_comp12245_c1_seq4
140bp
 PREDICTED:_mismatch_repair_endonuclease_PMS2_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0015630 C microtubule cytoskeleton
GO:0016446 P somatic hypermutation of immunoglobulin genes
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030983 F mismatched DNA binding
GO:0032138 F single base insertion or deletion binding
GO:0032300 C mismatch repair complex
GO:0032389 C MutLalpha complex
GO:0032407 F MutSalpha complex binding
GO:0042493 P response to xenobiotic stimulus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
626 O_BomoSK10564_complete:A_BomoSK_comp12245_c1_seq5
875bp
 PREDICTED:_mismatch_repair_endonuclease_PMS2_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007126 P meiotic cell cycle
GO:0015630 C microtubule cytoskeleton
GO:0016446 P somatic hypermutation of immunoglobulin genes
GO:0016447 P somatic recombination of immunoglobulin gene segments
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030983 F mismatched DNA binding
GO:0032138 F single base insertion or deletion binding
GO:0032300 C mismatch repair complex
GO:0032389 C MutLalpha complex
GO:0032407 F MutSalpha complex binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
627 O_BomoSK10565_complete:A_BomoSK_comp12245_c1_seq5
445bp
 PREDICTED:_glutamate-rich_WD_repeat-containing_protein_1_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0044822 F RNA binding
628 O_BomoSK10566_complete:A_BomoSK_comp12245_c1_seq5
130bp
 Chromatin_assembly_factor_1_subunit_[Operophtera_brumata]
629 O_BomoSK10567_complete:A_BomoSK_comp12246_c0_seq1
162bp
 LRP16_protein_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0051725 P protein de-ADP-ribosylation
630 O_BomoSK10568_complete:A_BomoSK_comp12246_c0_seq3
276bp
 LRP16_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006974 P cellular response to DNA damage stimulus
GO:0007420 P brain development
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0019213 F deacetylase activity
GO:0042278 P purine nucleoside metabolic process
GO:0051725 P protein de-ADP-ribosylation
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