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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
541 O_BomoSK10488_complete:A_BomoSK_comp12218_c0_seq1
243bp
 PREDICTED:_serine/arginine-rich_splicing_factor_1A_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
542 O_BomoSK10489_complete:A_BomoSK_comp12218_c0_seq2
243bp
 PREDICTED:_serine/arginine-rich_splicing_factor_1A_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
543 O_BomoSK1048_internal:A_BomoSK_comp3834_c0_seq1
325bp
 PREDICTED:_protein_alan_shepard_isoform_X4_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0009629 P response to gravity
544 O_BomoSK10490_complete:A_BomoSK_comp12218_c0_seq2
100bp
 hypothetical_protein_[Streptomyces_atriruber]
545 O_BomoSK10491_internal:A_BomoSK_comp12219_c0_seq1
601bp
 PREDICTED:_uncharacterized_protein_LOC101735688_[Bombyx_mori]
546 O_BomoSK10492_5prime_partial:A_BomoSK_comp12219_c0_seq1
456bp
547 O_BomoSK10493_complete:A_BomoSK_comp12219_c0_seq1
135bp
548 O_BomoSK10494_complete:A_BomoSK_comp12220_c0_seq2
907bp
 PREDICTED:_glutamate_receptor_ionotropic,_kainate_2-like_[Bombyx_mori]
GO:0001662 P behavioral fear response
GO:0004872 F signaling receptor activity
GO:0004970 F ionotropic glutamate receptor activity
GO:0005216 F ion channel activity
GO:0005234 F extracellularly glutamate-gated ion channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0006886 P intracellular protein transport
GO:0007268 P chemical synaptic transmission
GO:0008066 F glutamate receptor activity
GO:0008328 C ionotropic glutamate receptor complex
GO:0014069 C postsynaptic density
GO:0015277 F kainate selective glutamate receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019228 P neuronal action potential
GO:0030054 C cell junction
GO:0030165 F PDZ domain binding
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0031625 F ubiquitin protein ligase binding
GO:0032839 C dendrite cytoplasm
GO:0032983 C kainate selective glutamate receptor complex
GO:0034220 P ion transmembrane transport
GO:0035235 P ionotropic glutamate receptor signaling pathway
GO:0035249 P synaptic transmission, glutamatergic
GO:0042391 P regulation of membrane potential
GO:0042734 C presynaptic membrane
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043025 C neuronal cell body
GO:0043113 P receptor clustering
GO:0043195 C terminal bouton
GO:0043204 C perikaryon
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043525 P positive regulation of neuron apoptotic process
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046328 P regulation of JNK cascade
GO:0048169 P regulation of long-term neuronal synaptic plasticity
GO:0048172 P regulation of short-term neuronal synaptic plasticity
GO:0050804 P modulation of chemical synaptic transmission
GO:0050806 P positive regulation of synaptic transmission
GO:0051402 P neuron apoptotic process
GO:0051967 P negative regulation of synaptic transmission, glutamatergic
GO:0060079 P excitatory postsynaptic potential
GO:0060080 P inhibitory postsynaptic potential
549 O_BomoSK10495_complete:A_BomoSK_comp12220_c0_seq2
109bp
 Chitin_synthase_(fragment)_[Candidatus_Nitrosotalea_devanaterra]
550 O_BomoSK10496_complete:A_BomoSK_comp12220_c0_seq3
851bp
 PREDICTED:_glutamate_receptor_ionotropic,_kainate_2-like_[Bombyx_mori]
GO:0001662 P behavioral fear response
GO:0004872 F signaling receptor activity
GO:0004970 F ionotropic glutamate receptor activity
GO:0005216 F ion channel activity
GO:0005234 F extracellularly glutamate-gated ion channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0006886 P intracellular protein transport
GO:0007268 P chemical synaptic transmission
GO:0008066 F glutamate receptor activity
GO:0008328 C ionotropic glutamate receptor complex
GO:0014069 C postsynaptic density
GO:0015277 F kainate selective glutamate receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019228 P neuronal action potential
GO:0030054 C cell junction
GO:0030165 F PDZ domain binding
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0031625 F ubiquitin protein ligase binding
GO:0032839 C dendrite cytoplasm
GO:0032983 C kainate selective glutamate receptor complex
GO:0034220 P ion transmembrane transport
GO:0035235 P ionotropic glutamate receptor signaling pathway
GO:0035249 P synaptic transmission, glutamatergic
GO:0042391 P regulation of membrane potential
GO:0042734 C presynaptic membrane
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043025 C neuronal cell body
GO:0043113 P receptor clustering
GO:0043195 C terminal bouton
GO:0043204 C perikaryon
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043525 P positive regulation of neuron apoptotic process
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046328 P regulation of JNK cascade
GO:0048169 P regulation of long-term neuronal synaptic plasticity
GO:0048172 P regulation of short-term neuronal synaptic plasticity
GO:0050804 P modulation of chemical synaptic transmission
GO:0050806 P positive regulation of synaptic transmission
GO:0051402 P neuron apoptotic process
GO:0051967 P negative regulation of synaptic transmission, glutamatergic
GO:0060079 P excitatory postsynaptic potential
GO:0060080 P inhibitory postsynaptic potential
551 O_BomoSK10497_complete:A_BomoSK_comp12220_c0_seq3
109bp
 Chitin_synthase_(fragment)_[Candidatus_Nitrosotalea_devanaterra]
552 O_BomoSK10498_complete:A_BomoSK_comp12221_c0_seq3
126bp
 Zinc_finger_HIT_domain-containing_protein_3_[Operophtera_brumata]
GO:0046872 F metal ion binding
553 O_BomoSK10499_complete:A_BomoSK_comp12223_c0_seq1
474bp
 hypothetical_protein_OBRU01_13301_[Operophtera_brumata]
554 O_BomoSK1049_internal:A_BomoSK_comp3834_c0_seq2
336bp
 PREDICTED:_protein_alan_shepard_isoform_X3_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0009629 P response to gravity
555 O_BomoSK104_5prime_partial:A_BomoSK_comp383_c0_seq1
160bp
 PREDICTED:_zinc_finger_protein_basonuclin-2-like_[Bombyx_mori]
556 O_BomoSK10500_complete:A_BomoSK_comp12223_c0_seq1
101bp
557 O_BomoSK10501_3prime_partial:A_BomoSK_comp12224_c1_seq1
122bp
558 O_BomoSK10502_5prime_partial:A_BomoSK_comp12224_c1_seq1
109bp
 putative_Rho-associated_protein_kinase_[Danaus_plexippus]
559 O_BomoSK10503_3prime_partial:A_BomoSK_comp12225_c0_seq1
399bp
 PREDICTED:_uncharacterized_protein_LOC105842077_[Bombyx_mori]
GO:0005829 C cytosol
560 O_BomoSK10504_complete:A_BomoSK_comp12225_c0_seq2
524bp
 PREDICTED:_uncharacterized_protein_LOC105842077_[Bombyx_mori]
GO:0005829 C cytosol
561 O_BomoSK10505_complete:A_BomoSK_comp12226_c0_seq1
674bp
 PREDICTED:_kinesin-like_protein_KIF3A_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007018 P microtubule-based movement
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0030030 P cell projection organization
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0072372 C cilium
562 O_BomoSK10506_complete:A_BomoSK_comp12226_c0_seq1
212bp
 hypothetical_protein_Ctob_003354_[Chrysochromulina_sp._CCMP291]
563 O_BomoSK10507_complete:A_BomoSK_comp12226_c0_seq1
117bp
564 O_BomoSK10508_3prime_partial:A_BomoSK_comp12228_c0_seq1
271bp
 PREDICTED:_tudor_domain-containing_protein_7_isoform_X2_[Bombyx_mori]
GO:0002089 P lens morphogenesis in camera-type eye
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005737 C cytoplasm
GO:0007283 P spermatogenesis
GO:0010608 P posttranscriptional regulation of gene expression
GO:0030154 P cell differentiation
GO:0030719 P P granule organization
GO:0035770 C ribonucleoprotein granule
GO:0043186 C P granule
GO:0070306 P lens fiber cell differentiation
565 O_BomoSK10509_5prime_partial:A_BomoSK_comp12228_c0_seq1
100bp
566 O_BomoSK1050_complete:A_BomoSK_comp3835_c0_seq1
285bp
 PREDICTED:_OTU_domain-containing_protein_6B_[Plutella_xylostella]
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
567 O_BomoSK10510_3prime_partial:A_BomoSK_comp12228_c0_seq2
592bp
 PREDICTED:_tudor_domain-containing_protein_7_isoform_X2_[Bombyx_mori]
GO:0002089 P lens morphogenesis in camera-type eye
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005737 C cytoplasm
GO:0007283 P spermatogenesis
GO:0010608 P posttranscriptional regulation of gene expression
GO:0030154 P cell differentiation
GO:0035770 C ribonucleoprotein granule
GO:0070306 P lens fiber cell differentiation
568 O_BomoSK10511_complete:A_BomoSK_comp12228_c0_seq2
119bp
 PREDICTED:_kinesin-like_protein_KIF16B,_partial_[Stegastes_partitus]
569 O_BomoSK10512_5prime_partial:A_BomoSK_comp12228_c0_seq2
100bp
570 O_BomoSK10513_complete:A_BomoSK_comp12229_c0_seq1
147bp
 PREDICTED:_uncharacterized_protein_LOC106139030_[Amyelois_transitella]
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