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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
481 O_BomoSK10433_3prime_partial:A_BomoSK_comp12192_c0_seq4
352bp
 PREDICTED:_venom_acid_phosphatase_Acph-1-like_[Papilio_xuthus]
GO:0003993 F acid phosphatase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005765 C lysosomal membrane
GO:0005886 C plasma membrane
GO:0006144 P purine nucleobase metabolic process
GO:0006772 P thiamine metabolic process
GO:0008253 F 5'-nucleotidase activity
GO:0009117 P nucleotide metabolic process
GO:0012506 C vesicle membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030175 C filopodium
GO:0042131 F thiamine phosphate phosphatase activity
GO:0042802 F identical protein binding
GO:0046085 P adenosine metabolic process
GO:0051930 P regulation of sensory perception of pain
GO:0052642 F lysophosphatidic acid phosphatase activity
GO:0060168 P positive regulation of adenosine receptor signaling pathway
GO:0070062 C extracellular exosome
482 O_BomoSK10434_complete:A_BomoSK_comp12193_c0_seq1
219bp
 fibroin-modulator-binding_protein-1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
483 O_BomoSK10435_3prime_partial:A_BomoSK_comp12194_c0_seq1
103bp
 bem46_protein_[Pseudomonas_sp._StFLB209]
484 O_BomoSK10436_3prime_partial:A_BomoSK_comp12194_c0_seq2
103bp
 bem46_protein_[Pseudomonas_sp._StFLB209]
485 O_BomoSK10437_complete:A_BomoSK_comp12195_c0_seq1
314bp
 elongation_of_very_long_chain_fatty_acids_protein_AAEL008004_[Papilio_xuthus]
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0030176 C integral component of endoplasmic reticulum membrane
486 O_BomoSK10438_5prime_partial:A_BomoSK_comp12195_c0_seq1
100bp
 Thrombospondin_type-1_domain-containing_protein_7A,_partial_[Ophiophagus_hannah]
487 O_BomoSK10439_5prime_partial:A_BomoSK_comp12196_c0_seq1
310bp
 PREDICTED:_dolichyl-phosphate-mannose--protein_mannosyltransferase_4_isoform_X2_[Amyelois_transitella]
GO:0000030 F mannosyltransferase activity
GO:0004169 F dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006493 P protein O-linked glycosylation
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030259 P lipid glycosylation
GO:0035269 P protein O-linked mannosylation
GO:0097502 P mannosylation
488 O_BomoSK1043_complete:A_BomoSK_comp3832_c0_seq1
176bp
489 O_BomoSK10440_complete:A_BomoSK_comp12196_c0_seq2
710bp
 PREDICTED:_dolichyl-phosphate-mannose--protein_mannosyltransferase_4_isoform_X1_[Amyelois_transitella]
GO:0000030 F mannosyltransferase activity
GO:0000032 P cell wall mannoprotein biosynthetic process
GO:0004169 F dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006493 P protein O-linked glycosylation
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0007525 P somatic muscle development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016203 P muscle attachment
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030259 P lipid glycosylation
GO:0031502 C dolichyl-phosphate-mannose-protein mannosyltransferase complex
GO:0035269 P protein O-linked mannosylation
GO:0044845 P chain elongation of O-linked mannose residue
GO:0045214 P sarcomere organization
GO:1900101 P regulation of endoplasmic reticulum unfolded protein response
490 O_BomoSK10441_complete:A_BomoSK_comp12196_c0_seq2
149bp
 hypothetical_protein_O9G_004352_[Rozella_allomycis_CSF55]
491 O_BomoSK10442_complete:A_BomoSK_comp12196_c0_seq2
117bp
 ftsK/SpoIIIE_family_protein_[Mycobacterium_xenopi_3993]
492 O_BomoSK10443_5prime_partial:A_BomoSK_comp12198_c0_seq1
238bp
 PREDICTED:_tetratricopeptide_repeat_protein_21B-like_[Bombyx_mori]
GO:0000790 C chromatin
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007224 P smoothened signaling pathway
GO:0008589 P regulation of smoothened signaling pathway
GO:0021591 P ventricular system development
GO:0021798 P forebrain dorsal/ventral pattern formation
GO:0030991 C intraciliary transport particle A
GO:0035721 P intraciliary retrograde transport
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0042995 C cell projection
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
493 O_BomoSK10444_5prime_partial:A_BomoSK_comp12198_c0_seq2
235bp
 PREDICTED:_tetratricopeptide_repeat_protein_21B-like_[Bombyx_mori]
GO:0000790 C chromatin
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007224 P smoothened signaling pathway
GO:0008589 P regulation of smoothened signaling pathway
GO:0021591 P ventricular system development
GO:0021798 P forebrain dorsal/ventral pattern formation
GO:0030991 C intraciliary transport particle A
GO:0035721 P intraciliary retrograde transport
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0042995 C cell projection
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
494 O_BomoSK10445_5prime_partial:A_BomoSK_comp12198_c0_seq4
235bp
 PREDICTED:_tetratricopeptide_repeat_protein_21B-like_[Bombyx_mori]
GO:0000790 C chromatin
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007224 P smoothened signaling pathway
GO:0008589 P regulation of smoothened signaling pathway
GO:0021591 P ventricular system development
GO:0021798 P forebrain dorsal/ventral pattern formation
GO:0030991 C intraciliary transport particle A
GO:0035721 P intraciliary retrograde transport
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0042995 C cell projection
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
495 O_BomoSK10446_5prime_partial:A_BomoSK_comp12198_c0_seq5
238bp
 PREDICTED:_tetratricopeptide_repeat_protein_21B-like_[Bombyx_mori]
GO:0000790 C chromatin
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007224 P smoothened signaling pathway
GO:0008589 P regulation of smoothened signaling pathway
GO:0021591 P ventricular system development
GO:0021798 P forebrain dorsal/ventral pattern formation
GO:0030991 C intraciliary transport particle A
GO:0035721 P intraciliary retrograde transport
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0042995 C cell projection
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
496 O_BomoSK10447_3prime_partial:A_BomoSK_comp12199_c0_seq1
1210bp
 PREDICTED:_adenomatous_polyposis_coli_protein-like_isoform_X1_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000776 C kinetochore
GO:0001708 P cell fate specification
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005881 C cytoplasmic microtubule
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005913 C adherens junction
GO:0005938 C cell cortex
GO:0006461 P protein-containing complex assembly
GO:0006974 P cellular response to DNA damage stimulus
GO:0007026 P negative regulation of microtubule depolymerization
GO:0007050 P regulation of cell cycle
GO:0007163 P establishment or maintenance of cell polarity
GO:0007389 P pattern specification process
GO:0008013 F beta-catenin binding
GO:0008017 F microtubule binding
GO:0008283 P cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016477 P cell migration
GO:0019887 F protein kinase regulator activity
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030877 C beta-catenin destruction complex
GO:0031016 P pancreas development
GO:0031175 P neuron projection development
GO:0031965 C nuclear membrane
GO:0032403 F protein-containing complex binding
GO:0032587 C ruffle membrane
GO:0032886 P regulation of microtubule-based process
GO:0042493 P response to xenobiotic stimulus
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043065 P positive regulation of apoptotic process
GO:0043234 C protein-containing complex
GO:0044295 C axonal growth cone
GO:0044306 C neuron projection terminus
GO:0045202 C synapse
GO:0045295 F gamma-catenin binding
GO:0045595 P regulation of cell differentiation
GO:0045732 P positive regulation of protein catabolic process
GO:0045736 P negative regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0051010 F microtubule plus-end binding
GO:0070852 C cell body fiber
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0097305 P response to alcohol
GO:1990090 P cellular response to nerve growth factor stimulus
GO:2000211 P regulation of glutamate metabolic process
497 O_BomoSK10448_5prime_partial:A_BomoSK_comp12199_c0_seq1
150bp
 PREDICTED:_CD9_antigen,_partial_[Ornithorhynchus_anatinus]
498 O_BomoSK10449_complete:A_BomoSK_comp12199_c0_seq1
109bp
 hypothetical_protein_[Methylococcaceae_bacterium_Sn10-6]
499 O_BomoSK1044_internal:A_BomoSK_comp3832_c0_seq2
578bp
 PREDICTED:_PHD_finger_protein_14_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0008270 F zinc ion binding
GO:0008285 P negative regulation of cell population proliferation
GO:0046872 F metal ion binding
GO:0048286 P lung alveolus development
GO:0072201 P negative regulation of mesenchymal cell proliferation
GO:2000584 P negative regulation of platelet-derived growth factor receptor-alpha signaling pathway
GO:2000791 P negative regulation of mesenchymal cell proliferation involved in lung development
500 O_BomoSK10450_3prime_partial:A_BomoSK_comp12199_c0_seq2
1316bp
 PREDICTED:_adenomatous_polyposis_coli_protein-like_isoform_X1_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000776 C kinetochore
GO:0001708 P cell fate specification
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005881 C cytoplasmic microtubule
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005913 C adherens junction
GO:0005938 C cell cortex
GO:0006461 P protein-containing complex assembly
GO:0006974 P cellular response to DNA damage stimulus
GO:0007026 P negative regulation of microtubule depolymerization
GO:0007050 P regulation of cell cycle
GO:0007163 P establishment or maintenance of cell polarity
GO:0007389 P pattern specification process
GO:0008013 F beta-catenin binding
GO:0008017 F microtubule binding
GO:0008283 P cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016477 P cell migration
GO:0019887 F protein kinase regulator activity
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030877 C beta-catenin destruction complex
GO:0031016 P pancreas development
GO:0031175 P neuron projection development
GO:0031965 C nuclear membrane
GO:0032403 F protein-containing complex binding
GO:0032587 C ruffle membrane
GO:0032886 P regulation of microtubule-based process
GO:0042493 P response to xenobiotic stimulus
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043065 P positive regulation of apoptotic process
GO:0043234 C protein-containing complex
GO:0044295 C axonal growth cone
GO:0044306 C neuron projection terminus
GO:0045202 C synapse
GO:0045295 F gamma-catenin binding
GO:0045595 P regulation of cell differentiation
GO:0045732 P positive regulation of protein catabolic process
GO:0045736 P negative regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0051010 F microtubule plus-end binding
GO:0070852 C cell body fiber
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0097305 P response to alcohol
GO:1990090 P cellular response to nerve growth factor stimulus
GO:2000211 P regulation of glutamate metabolic process
501 O_BomoSK10451_5prime_partial:A_BomoSK_comp12199_c0_seq2
150bp
 PREDICTED:_CD9_antigen,_partial_[Ornithorhynchus_anatinus]
502 O_BomoSK10452_complete:A_BomoSK_comp12199_c0_seq2
109bp
 hypothetical_protein_[Methylococcaceae_bacterium_Sn10-6]
503 O_BomoSK10453_3prime_partial:A_BomoSK_comp12199_c0_seq3
1316bp
 PREDICTED:_adenomatous_polyposis_coli_protein-like_isoform_X1_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000776 C kinetochore
GO:0001708 P cell fate specification
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005881 C cytoplasmic microtubule
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005913 C adherens junction
GO:0005938 C cell cortex
GO:0006461 P protein-containing complex assembly
GO:0006974 P cellular response to DNA damage stimulus
GO:0007026 P negative regulation of microtubule depolymerization
GO:0007050 P regulation of cell cycle
GO:0007163 P establishment or maintenance of cell polarity
GO:0007389 P pattern specification process
GO:0008013 F beta-catenin binding
GO:0008017 F microtubule binding
GO:0008283 P cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016477 P cell migration
GO:0019887 F protein kinase regulator activity
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030877 C beta-catenin destruction complex
GO:0031016 P pancreas development
GO:0031175 P neuron projection development
GO:0031965 C nuclear membrane
GO:0032403 F protein-containing complex binding
GO:0032587 C ruffle membrane
GO:0032886 P regulation of microtubule-based process
GO:0042493 P response to xenobiotic stimulus
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043065 P positive regulation of apoptotic process
GO:0043234 C protein-containing complex
GO:0044295 C axonal growth cone
GO:0044306 C neuron projection terminus
GO:0045202 C synapse
GO:0045295 F gamma-catenin binding
GO:0045595 P regulation of cell differentiation
GO:0045732 P positive regulation of protein catabolic process
GO:0045736 P negative regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0051010 F microtubule plus-end binding
GO:0070852 C cell body fiber
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0097305 P response to alcohol
GO:1990090 P cellular response to nerve growth factor stimulus
GO:2000211 P regulation of glutamate metabolic process
504 O_BomoSK10454_5prime_partial:A_BomoSK_comp12199_c0_seq3
150bp
 PREDICTED:_CD9_antigen,_partial_[Ornithorhynchus_anatinus]
505 O_BomoSK10455_complete:A_BomoSK_comp12199_c0_seq3
109bp
 hypothetical_protein_[Methylococcaceae_bacterium_Sn10-6]
506 O_BomoSK10456_3prime_partial:A_BomoSK_comp12202_c0_seq1
324bp
 PREDICTED:_E3_ubiquitin-protein_ligase_RNF19B-like_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044194 C cytolytic granule
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
507 O_BomoSK10457_5prime_partial:A_BomoSK_comp12202_c0_seq1
164bp
 PREDICTED:_disease_resistance_protein_RPM1-like_[Malus_domestica]
508 O_BomoSK10458_internal:A_BomoSK_comp12205_c0_seq1
185bp
 hypothetical_protein_[Streptomyces_atratus]
509 O_BomoSK10459_5prime_partial:A_BomoSK_comp12205_c0_seq1
162bp
510 O_BomoSK1045_complete:A_BomoSK_comp3832_c0_seq2
176bp
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