Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
4351	O_BomoSK13917_complete:A_BomoSK_comp13401_c0_seq8 337bp	Bomo_Chr5	PREDICTED:_trans-1,2-dihydrobenzene-1,2-diol_dehydrogenase-like_isoform_X2_[Papilio_polytes]	GO:0016491 F oxidoreductase activity GO:0042843 P D-xylose catabolic process GO:0047115 F trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity GO:0047837 F D-xylose 1-dehydrogenase (NADP+) activity GO:0055114 P obsolete oxidation-reduction process
4352	O_BomoSK13918_complete:A_BomoSK_comp13401_c0_seq8 121bp	Bomo_Chr5	PREDICTED:_gem-associated_protein_2-like_[Papilio_polytes]	GO:0000245 P spliceosomal complex assembly GO:0000375 P RNA splicing, via transesterification reactions GO:0000387 P spliceosomal snRNP assembly GO:0005515 F protein binding GO:0005622 C intracellular anatomical structure GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005681 C spliceosomal complex GO:0005730 C nucleolus GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0032797 C SMN complex GO:0034719 C SMN-Sm protein complex GO:0051170 P import into nucleus GO:0097504 C Gemini of coiled bodies
4353	O_BomoSK13919_5prime_partial:A_BomoSK_comp13402_c0_seq1 300bp	Bomo_Chr12	PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101742799_[Bombyx_mori]	GO:0006718 P juvenile hormone biosynthetic process GO:0008168 F methyltransferase activity GO:0016740 F transferase activity GO:0019010 F farnesoic acid O-methyltransferase activity GO:0032259 P methylation GO:0035049 F juvenile hormone acid methyltransferase activity
4354	O_BomoSK1391_complete:A_BomoSK_comp4158_c0_seq1 367bp	Bomo_Chr5	Prolyl_3-hydroxylase_1_[Operophtera_brumata]	GO:0005576 C extracellular region GO:0005578 C extracellular matrix GO:0005615 C extracellular space GO:0005783 C endoplasmic reticulum GO:0005788 C endoplasmic reticulum lumen GO:0007283 P spermatogenesis GO:0018400 P peptidyl-proline hydroxylation to 3-hydroxy-L-proline GO:0032403 F protein-containing complex binding GO:0032991 C protein-containing complex GO:0050821 P protein stabilization GO:0061077 P chaperone-mediated protein folding GO:1901874 P negative regulation of post-translational protein modification
4355	O_BomoSK13920_internal:A_BomoSK_comp13402_c0_seq2 220bp	Bomo_Chr12	PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101742799_[Bombyx_mori]	GO:0006718 P juvenile hormone biosynthetic process GO:0008168 F methyltransferase activity GO:0016740 F transferase activity GO:0019010 F farnesoic acid O-methyltransferase activity GO:0032259 P methylation GO:0035049 F juvenile hormone acid methyltransferase activity
4356	O_BomoSK13921_3prime_partial:A_BomoSK_comp13403_c0_seq1 390bp	Bomo_Chr5	PREDICTED:_uncharacterized_protein_LOC101747074_isoform_X1_[Bombyx_mori]
4357	O_BomoSK13922_complete:A_BomoSK_comp13403_c0_seq1 126bp	Bomo_Chr5
4358	O_BomoSK13923_complete:A_BomoSK_comp13403_c0_seq2 543bp	Bomo_Chr5	PREDICTED:_uncharacterized_protein_LOC101747074_isoform_X2_[Bombyx_mori]
4359	O_BomoSK13924_3prime_partial:A_BomoSK_comp13403_c0_seq2 522bp	Bomo_Chr5	PREDICTED:_uncharacterized_protein_LOC101747074_isoform_X1_[Bombyx_mori]
4360	O_BomoSK13925_complete:A_BomoSK_comp13403_c0_seq2 126bp	Bomo_Chr5
4361	O_BomoSK13926_complete:A_BomoSK_comp13403_c0_seq2 104bp	Bomo_Chr5	dual-specificity_RNA_methyltransferase_RlmN_[Corynebacterium_ulceribovis]
4362	O_BomoSK13927_complete:A_BomoSK_comp13403_c0_seq3 543bp	Bomo_Chr5	PREDICTED:_uncharacterized_protein_LOC101747074_isoform_X2_[Bombyx_mori]
4363	O_BomoSK13928_3prime_partial:A_BomoSK_comp13403_c0_seq3 510bp	Bomo_Chr5	PREDICTED:_uncharacterized_protein_LOC101747074_isoform_X1_[Bombyx_mori]
4364	O_BomoSK13929_complete:A_BomoSK_comp13403_c0_seq3 126bp	Bomo_Chr5
4365	O_BomoSK1392_3prime_partial:A_BomoSK_comp4161_c0_seq1 227bp	Bomo_Chr13	PREDICTED:_polyprenol_reductase_isoform_X1_[Amyelois_transitella]	GO:0005737 C cytoplasm GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0006486 P protein glycosylation GO:0006488 P dolichol-linked oligosaccharide biosynthetic process GO:0006629 P lipid metabolic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016095 P polyprenol catabolic process GO:0016491 F oxidoreductase activity GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors GO:0019348 P dolichol metabolic process GO:0055114 P obsolete oxidation-reduction process
4366	O_BomoSK13930_complete:A_BomoSK_comp13403_c0_seq3 104bp	Bomo_Chr5	dual-specificity_RNA_methyltransferase_RlmN_[Corynebacterium_ulceribovis]
4367	O_BomoSK13931_internal:A_BomoSK_comp13403_c0_seq4 225bp	Bomo_Chr5	PREDICTED:_uncharacterized_protein_LOC101747074_isoform_X2_[Bombyx_mori]
4368	O_BomoSK13932_complete:A_BomoSK_comp13403_c0_seq4 126bp	Bomo_Chr5
4369	O_BomoSK13933_complete:A_BomoSK_comp13404_c0_seq1 311bp	Bomo_Chr19	PREDICTED:_uncharacterized_protein_LOC101735983_[Bombyx_mori]
4370	O_BomoSK13934_complete:A_BomoSK_comp13404_c0_seq1 123bp	Bomo_Chr19	RHS_repeat-associated_core_domain_protein_[Leptospira_sp._Fiocruz_LV3954]
4371	O_BomoSK13935_complete:A_BomoSK_comp13404_c0_seq2 308bp	Bomo_Chr19	PREDICTED:_uncharacterized_protein_LOC101735983_[Bombyx_mori]
4372	O_BomoSK13936_complete:A_BomoSK_comp13405_c0_seq3 111bp	Bomo_Chr13	PREDICTED:_melanoregulin_[Latimeria_chalumnae]
4373	O_BomoSK13937_complete:A_BomoSK_comp13405_c0_seq4 111bp	Bomo_Chr13	PREDICTED:_melanoregulin_[Latimeria_chalumnae]
4374	O_BomoSK13938_complete:A_BomoSK_comp13405_c0_seq4 109bp	Bomo_Chr13	hypothetical_protein_[Leadbetterella_sp._JN14-9]
4375	O_BomoSK13939_complete:A_BomoSK_comp13405_c0_seq5 111bp	Bomo_Chr13	PREDICTED:_melanoregulin_[Latimeria_chalumnae]
4376	O_BomoSK1393_internal:A_BomoSK_comp4162_c0_seq1 147bp	Bomo_Chr10	PREDICTED:_LOW_QUALITY_PROTEIN:_translational_activator_GCN1_[Bombyx_mori]	GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005844 C polysome GO:0006417 P regulation of translation GO:0016020 C membrane GO:0019887 F protein kinase regulator activity GO:0019901 F protein kinase binding GO:0033554 P cellular response to stress GO:0033674 P positive regulation of kinase activity GO:0034198 P cellular response to amino acid starvation GO:0036003 P positive regulation of transcription from RNA polymerase II promoter in response to stress GO:0043022 F ribosome binding GO:0044822 F RNA binding GO:0045859 P regulation of protein kinase activity GO:1990253 P cellular response to leucine starvation
4377	O_BomoSK13940_complete:A_BomoSK_comp13405_c0_seq5 109bp	Bomo_Chr13	hypothetical_protein_[Leadbetterella_sp._JN14-9]
4378	O_BomoSK13941_complete:A_BomoSK_comp13406_c0_seq1 1395bp	Bomo_Chr15	PREDICTED:_LOW_QUALITY_PROTEIN:_extracellular_sulfatase_SULF-1_homolog_[Bombyx_mori]	GO:0003824 F catalytic activity GO:0005615 C extracellular space GO:0005783 C endoplasmic reticulum GO:0005794 C Golgi apparatus GO:0005795 C Golgi stack GO:0007389 P pattern specification process GO:0008045 P motor neuron axon guidance GO:0008152 P metabolic process GO:0008449 F N-acetylglucosamine-6-sulfatase activity GO:0008484 F sulfuric ester hydrolase activity GO:0009986 C cell surface GO:0016201 P synaptic target inhibition GO:0016787 F hydrolase activity GO:0030178 P negative regulation of Wnt signaling pathway GO:0030202 P heparin metabolic process GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway GO:0045879 P negative regulation of smoothened signaling pathway GO:0045880 P positive regulation of smoothened signaling pathway GO:0046872 F metal ion binding
4379	O_BomoSK13942_complete:A_BomoSK_comp13406_c0_seq1 128bp	Bomo_Chr15	hypothetical_protein_MYCTH_2306820_[Myceliophthora_thermophila_ATCC_42464]
4380	O_BomoSK13943_complete:A_BomoSK_comp13407_c0_seq1 291bp	Bomo_Chr23	hypothetical_protein_KGM_09643_[Danaus_plexippus]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0006810 P transport GO:0006811 P ion transport GO:0006829 P zinc ion transport GO:0008150 P biological_process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0030001 P metal ion transport GO:0046873 F metal ion transmembrane transporter activity GO:0055085 P transmembrane transport