Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
4321	O_BomoSK13890_3prime_partial:A_BomoSK_comp13394_c0_seq4 799bp	Bomo_Chr5	PREDICTED:_serrate_RNA_effector_molecule_homolog_isoform_X1_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0031047 P gene silencing by RNA GO:0031053 P primary miRNA processing
4322	O_BomoSK13891_complete:A_BomoSK_comp13395_c0_seq1 121bp	Bomo_Chr17	PREDICTED:_protein_yellow-like_[Bombyx_mori]
4323	O_BomoSK13892_5prime_partial:A_BomoSK_comp13395_c0_seq2 464bp	Bomo_Chr17	PREDICTED:_protein_yellow-like_[Bombyx_mori]	GO:0005576 C extracellular region GO:0007275 P multicellular organism development GO:0042438 P melanin biosynthetic process GO:0060179 P male mating behavior
4324	O_BomoSK13893_5prime_partial:A_BomoSK_comp13395_c0_seq3 145bp	Bomo_Chr17	PREDICTED:_protein_yellow-like_[Bombyx_mori]
4325	O_BomoSK13894_5prime_partial:A_BomoSK_comp13395_c0_seq4 182bp	Bomo_Chr17	PREDICTED:_protein_yellow-like_[Bombyx_mori]	GO:0005576 C extracellular region GO:0042438 P melanin biosynthetic process GO:0060179 P male mating behavior
4326	O_BomoSK13895_5prime_partial:A_BomoSK_comp13395_c0_seq6 145bp	Bomo_Chr17	PREDICTED:_protein_yellow-like_[Bombyx_mori]
4327	O_BomoSK13896_complete:A_BomoSK_comp13395_c0_seq6 121bp	Bomo_Chr17	PREDICTED:_protein_yellow-like_[Bombyx_mori]
4328	O_BomoSK13897_complete:A_BomoSK_comp13396_c1_seq1 541bp	Bomo_Chr22	PREDICTED:_polypyrimidine_tract-binding_protein_2_isoform_X2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0003729 F mRNA binding GO:0005634 C nucleus GO:0005681 C spliceosomal complex GO:0006376 P mRNA splice site selection GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0021510 P spinal cord development GO:0021549 P cerebellum development GO:0030426 C growth cone GO:0033119 P negative regulation of RNA splicing GO:0036002 F pre-mRNA binding GO:0043025 C neuronal cell body GO:0044822 F RNA binding GO:2000177 P regulation of neural precursor cell proliferation
4329	O_BomoSK13898_complete:A_BomoSK_comp13396_c1_seq3 569bp	Bomo_Chr22	PREDICTED:_polypyrimidine_tract-binding_protein_2_isoform_X5_[Papilio_machaon]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0003729 F mRNA binding GO:0005634 C nucleus GO:0005681 C spliceosomal complex GO:0006376 P mRNA splice site selection GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0021510 P spinal cord development GO:0021549 P cerebellum development GO:0030426 C growth cone GO:0033119 P negative regulation of RNA splicing GO:0036002 F pre-mRNA binding GO:0043025 C neuronal cell body GO:0044822 F RNA binding GO:2000177 P regulation of neural precursor cell proliferation
4330	O_BomoSK13899_complete:A_BomoSK_comp13398_c0_seq1 445bp	Bomo_Chr28	hypothetical_protein_KGM_07261_[Danaus_plexippus]	GO:0004842 F ubiquitin-protein transferase activity GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005794 C Golgi apparatus GO:0042787 P ubiquitin-dependent protein catabolic process
4331	O_BomoSK1389_5prime_partial:A_BomoSK_comp4156_c0_seq2 411bp	Bomo_Chr22	PREDICTED:_LMBR1_domain-containing_protein_2_homolog_isoform_X2_[Amyelois_transitella]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process GO:0016020 C membrane GO:0016021 C integral component of membrane
4332	O_BomoSK138_5prime_partial:A_BomoSK_comp431_c0_seq1 102bp	Bomo_Chr15	PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_[Bombyx_mori]
4333	O_BomoSK13900_complete:A_BomoSK_comp13398_c0_seq1 226bp	Bomo_Chr28
4334	O_BomoSK13901_5prime_partial:A_BomoSK_comp13399_c0_seq2 179bp	Bomo_Chr8	Envelope_fusion_protein_[Papilio_xuthus]
4335	O_BomoSK13902_complete:A_BomoSK_comp13399_c2_seq1 417bp	Bomo_Chr15	PREDICTED:_AP-3_complex_subunit_mu-1_[Amyelois_transitella]	GO:0005794 C Golgi apparatus GO:0006810 P transport GO:0006886 P intracellular protein transport GO:0008089 P anterograde axonal transport GO:0015031 P protein transport GO:0016020 C membrane GO:0016192 P vesicle-mediated transport GO:0030131 C clathrin adaptor complex GO:0030659 C cytoplasmic vesicle membrane GO:0031410 C cytoplasmic vesicle GO:0048490 P anterograde synaptic vesicle transport GO:1904115 C axon cytoplasm
4336	O_BomoSK13903_complete:A_BomoSK_comp13401_c0_seq1 337bp	Bomo_Chr5	PREDICTED:_trans-1,2-dihydrobenzene-1,2-diol_dehydrogenase-like_isoform_X2_[Papilio_polytes]	GO:0016491 F oxidoreductase activity GO:0042843 P D-xylose catabolic process GO:0047115 F trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity GO:0047837 F D-xylose 1-dehydrogenase (NADP+) activity GO:0055114 P obsolete oxidation-reduction process
4337	O_BomoSK13904_complete:A_BomoSK_comp13401_c0_seq1 206bp	Bomo_Chr5	PREDICTED:_gem-associated_protein_2-like_[Papilio_polytes]	GO:0000245 P spliceosomal complex assembly GO:0000387 P spliceosomal snRNP assembly GO:0005681 C spliceosomal complex GO:0005737 C cytoplasm GO:0006397 P mRNA processing GO:0007629 P flight behavior GO:0008344 P adult locomotory behavior GO:0008380 P RNA splicing GO:0022618 P ribonucleoprotein complex assembly GO:0032797 C SMN complex GO:0034718 C SMN-Gemin2 complex GO:0034730 C SmD-containing SMN-Sm protein complex GO:0071254 C cytoplasmic U snRNP body
4338	O_BomoSK13905_complete:A_BomoSK_comp13401_c0_seq2 337bp	Bomo_Chr5	PREDICTED:_trans-1,2-dihydrobenzene-1,2-diol_dehydrogenase-like_isoform_X2_[Papilio_polytes]	GO:0016491 F oxidoreductase activity GO:0042843 P D-xylose catabolic process GO:0047115 F trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity GO:0047837 F D-xylose 1-dehydrogenase (NADP+) activity GO:0055114 P obsolete oxidation-reduction process
4339	O_BomoSK13906_complete:A_BomoSK_comp13401_c0_seq2 104bp	Bomo_Chr5	PREDICTED:_gem-associated_protein_2-like_[Papilio_polytes]
4340	O_BomoSK13907_complete:A_BomoSK_comp13401_c0_seq3 337bp	Bomo_Chr5	PREDICTED:_trans-1,2-dihydrobenzene-1,2-diol_dehydrogenase-like_isoform_X2_[Papilio_polytes]	GO:0016491 F oxidoreductase activity GO:0042843 P D-xylose catabolic process GO:0047115 F trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity GO:0047837 F D-xylose 1-dehydrogenase (NADP+) activity GO:0055114 P obsolete oxidation-reduction process
4341	O_BomoSK13908_complete:A_BomoSK_comp13401_c0_seq3 189bp	Bomo_Chr5	PREDICTED:_gem-associated_protein_2-like_[Papilio_polytes]	GO:0000245 P spliceosomal complex assembly GO:0000387 P spliceosomal snRNP assembly GO:0005681 C spliceosomal complex GO:0005737 C cytoplasm GO:0006397 P mRNA processing GO:0007629 P flight behavior GO:0008344 P adult locomotory behavior GO:0008380 P RNA splicing GO:0022618 P ribonucleoprotein complex assembly GO:0032797 C SMN complex GO:0034718 C SMN-Gemin2 complex GO:0034730 C SmD-containing SMN-Sm protein complex GO:0071254 C cytoplasmic U snRNP body
4342	O_BomoSK13909_complete:A_BomoSK_comp13401_c0_seq4 337bp	Bomo_Chr5	PREDICTED:_trans-1,2-dihydrobenzene-1,2-diol_dehydrogenase-like_isoform_X2_[Papilio_polytes]	GO:0016491 F oxidoreductase activity GO:0042843 P D-xylose catabolic process GO:0047115 F trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity GO:0047837 F D-xylose 1-dehydrogenase (NADP+) activity GO:0055114 P obsolete oxidation-reduction process
4343	O_BomoSK1390_complete:A_BomoSK_comp4156_c0_seq2 103bp	Bomo_Chr22
4344	O_BomoSK13910_complete:A_BomoSK_comp13401_c0_seq4 241bp	Bomo_Chr5	PREDICTED:_gem-associated_protein_2-like_[Papilio_polytes]	GO:0000245 P spliceosomal complex assembly GO:0000387 P spliceosomal snRNP assembly GO:0005634 C nucleus GO:0005681 C spliceosomal complex GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0032797 C SMN complex GO:0034719 C SMN-Sm protein complex GO:0097504 C Gemini of coiled bodies
4345	O_BomoSK13911_complete:A_BomoSK_comp13401_c0_seq5 337bp	Bomo_Chr5	PREDICTED:_trans-1,2-dihydrobenzene-1,2-diol_dehydrogenase-like_isoform_X2_[Papilio_polytes]	GO:0016491 F oxidoreductase activity GO:0042843 P D-xylose catabolic process GO:0047115 F trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity GO:0047837 F D-xylose 1-dehydrogenase (NADP+) activity GO:0055114 P obsolete oxidation-reduction process
4346	O_BomoSK13912_complete:A_BomoSK_comp13401_c0_seq5 156bp	Bomo_Chr5	PREDICTED:_gem-associated_protein_2-like_[Papilio_machaon]	GO:0000245 P spliceosomal complex assembly GO:0000387 P spliceosomal snRNP assembly GO:0005634 C nucleus GO:0005681 C spliceosomal complex GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0032797 C SMN complex GO:0034719 C SMN-Sm protein complex GO:0097504 C Gemini of coiled bodies
4347	O_BomoSK13913_complete:A_BomoSK_comp13401_c0_seq6 337bp	Bomo_Chr5	PREDICTED:_trans-1,2-dihydrobenzene-1,2-diol_dehydrogenase-like_isoform_X2_[Papilio_polytes]	GO:0016491 F oxidoreductase activity GO:0042843 P D-xylose catabolic process GO:0047115 F trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity GO:0047837 F D-xylose 1-dehydrogenase (NADP+) activity GO:0055114 P obsolete oxidation-reduction process
4348	O_BomoSK13914_complete:A_BomoSK_comp13401_c0_seq6 104bp	Bomo_Chr5	PREDICTED:_gem-associated_protein_2-like_[Papilio_polytes]
4349	O_BomoSK13915_complete:A_BomoSK_comp13401_c0_seq7 337bp	Bomo_Chr5	PREDICTED:_trans-1,2-dihydrobenzene-1,2-diol_dehydrogenase-like_isoform_X2_[Papilio_polytes]	GO:0016491 F oxidoreductase activity GO:0042843 P D-xylose catabolic process GO:0047115 F trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity GO:0047837 F D-xylose 1-dehydrogenase (NADP+) activity GO:0055114 P obsolete oxidation-reduction process
4350	O_BomoSK13916_complete:A_BomoSK_comp13401_c0_seq7 189bp	Bomo_Chr5	PREDICTED:_gem-associated_protein_2-like_[Papilio_polytes]	GO:0000245 P spliceosomal complex assembly GO:0000387 P spliceosomal snRNP assembly GO:0005681 C spliceosomal complex GO:0005737 C cytoplasm GO:0006397 P mRNA processing GO:0007629 P flight behavior GO:0008344 P adult locomotory behavior GO:0008380 P RNA splicing GO:0022618 P ribonucleoprotein complex assembly GO:0032797 C SMN complex GO:0034718 C SMN-Gemin2 complex GO:0034730 C SmD-containing SMN-Sm protein complex GO:0071254 C cytoplasmic U snRNP body