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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4291 O_BomoSK13863_5prime_partial:A_BomoSK_comp13386_c0_seq1
373bp
 PREDICTED:_glyoxylate_reductase/hydroxypyruvate_reductase-like_isoform_X1_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005782 C peroxisomal matrix
GO:0005829 C cytosol
GO:0007588 P excretion
GO:0008152 P metabolic process
GO:0008465 F glycerate dehydrogenase activity
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016618 F hydroxypyruvate reductase activity
GO:0030267 F glyoxylate reductase (NADP+) activity
GO:0031406 F carboxylic acid binding
GO:0042803 F protein homodimerization activity
GO:0043648 P dicarboxylic acid metabolic process
GO:0046487 P glyoxylate metabolic process
GO:0050661 F NADP binding
GO:0051259 P protein complex oligomerization
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0070402 F NADPH binding
4292 O_BomoSK13864_internal:A_BomoSK_comp13388_c0_seq1
2526bp
 putative_coracle,_partial_[Operophtera_brumata]
GO:0003015 P heart process
GO:0003674 F molecular_function
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005918 C septate junction
GO:0005920 C smooth septate junction
GO:0006612 P protein targeting to membrane
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0007435 P salivary gland morphogenesis
GO:0007527 P adult somatic muscle development
GO:0008092 F cytoskeletal protein binding
GO:0008362 P chitin-based embryonic cuticle biosynthetic process
GO:0009790 P embryo development
GO:0019991 P septate junction assembly
GO:0030054 C cell junction
GO:0035151 P regulation of tube size, open tracheal system
GO:0035321 P maintenance of imaginal disc-derived wing hair orientation
GO:0045169 C fusome
GO:0045170 C spectrosome
GO:0045216 P cell-cell junction organization
GO:0060857 P establishment of glial blood-brain barrier
GO:0061343 P cell adhesion involved in heart morphogenesis
4293 O_BomoSK13865_complete:A_BomoSK_comp13389_c0_seq1
645bp
 PREDICTED:_uncharacterized_protein_LOC101735428_isoform_X2_[Bombyx_mori]
GO:0000976 F transcription cis-regulatory region binding
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0035497 F cAMP response element binding
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
4294 O_BomoSK13866_complete:A_BomoSK_comp13389_c0_seq1
133bp
 crossover_junction_endodeoxyribonuclease_RuvC_[Methylobacterium_nodulans_ORS_2060]
4295 O_BomoSK13867_complete:A_BomoSK_comp13389_c0_seq2
649bp
 PREDICTED:_uncharacterized_protein_LOC101735428_isoform_X2_[Bombyx_mori]
GO:0000976 F transcription cis-regulatory region binding
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0035497 F cAMP response element binding
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
4296 O_BomoSK13868_complete:A_BomoSK_comp13389_c0_seq2
133bp
 crossover_junction_endodeoxyribonuclease_RuvC_[Methylobacterium_nodulans_ORS_2060]
4297 O_BomoSK13869_complete:A_BomoSK_comp13390_c0_seq1
542bp
 PREDICTED:_gamma-tubulin_complex_component_2-like_isoform_X2_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0000922 C spindle pole
GO:0000923 C equatorial microtubule organizing center
GO:0005200 F structural constituent of cytoskeleton
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005816 C spindle pole body
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007017 P microtubule-based process
GO:0007020 P microtubule nucleation
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007126 P meiotic cell cycle
GO:0007283 P spermatogenesis
GO:0008017 F microtubule binding
GO:0008275 C gamma-tubulin small complex
GO:0030953 P astral microtubule organization
GO:0043015 F gamma-tubulin binding
GO:0051011 F microtubule minus-end binding
GO:0051225 P spindle assembly
GO:0051297 P centrosome cycle
GO:0051298 P centrosome duplication
GO:0051415 P microtubule nucleation by interphase microtubule organizing center
GO:0051726 P regulation of cell cycle
GO:0072686 C mitotic spindle
GO:0090063 P positive regulation of microtubule nucleation
GO:0090307 P mitotic spindle assembly
4298 O_BomoSK1386_5prime_partial:A_BomoSK_comp4156_c0_seq1
422bp
 PREDICTED:_LMBR1_domain-containing_protein_2_homolog_isoform_X1_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4299 O_BomoSK13870_complete:A_BomoSK_comp13390_c0_seq2
832bp
 PREDICTED:_gamma-tubulin_complex_component_2-like_isoform_X2_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0000922 C spindle pole
GO:0000923 C equatorial microtubule organizing center
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005816 C spindle pole body
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005881 C cytoplasmic microtubule
GO:0006461 P protein-containing complex assembly
GO:0007020 P microtubule nucleation
GO:0007126 P meiotic cell cycle
GO:0008275 C gamma-tubulin small complex
GO:0016020 C membrane
GO:0031122 P cytoplasmic microtubule organization
GO:0043015 F gamma-tubulin binding
GO:0051011 F microtubule minus-end binding
GO:0051298 P centrosome duplication
GO:0051415 P microtubule nucleation by interphase microtubule organizing center
GO:0090063 P positive regulation of microtubule nucleation
GO:0090307 P mitotic spindle assembly
4300 O_BomoSK13871_complete:A_BomoSK_comp13390_c0_seq3
295bp
 PREDICTED:_gamma-tubulin_complex_component_2-like_isoform_X2_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0000922 C spindle pole
GO:0000923 C equatorial microtubule organizing center
GO:0005200 F structural constituent of cytoskeleton
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005816 C spindle pole body
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007126 P meiotic cell cycle
GO:0008275 C gamma-tubulin small complex
GO:0016020 C membrane
GO:0031122 P cytoplasmic microtubule organization
GO:0043015 F gamma-tubulin binding
GO:0051011 F microtubule minus-end binding
GO:0051298 P centrosome duplication
GO:0051415 P microtubule nucleation by interphase microtubule organizing center
GO:0090063 P positive regulation of microtubule nucleation
GO:0090307 P mitotic spindle assembly
4301 O_BomoSK13872_complete:A_BomoSK_comp13390_c0_seq4
112bp
 PREDICTED:_gamma-tubulin_complex_component_2-like_isoform_X2_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0000922 C spindle pole
GO:0000923 C equatorial microtubule organizing center
GO:0005200 F structural constituent of cytoskeleton
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005816 C spindle pole body
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007017 P microtubule-based process
GO:0007020 P microtubule nucleation
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007126 P meiotic cell cycle
GO:0007283 P spermatogenesis
GO:0008017 F microtubule binding
GO:0008275 C gamma-tubulin small complex
GO:0030953 P astral microtubule organization
GO:0043015 F gamma-tubulin binding
GO:0051011 F microtubule minus-end binding
GO:0051225 P spindle assembly
GO:0051297 P centrosome cycle
GO:0051298 P centrosome duplication
GO:0051415 P microtubule nucleation by interphase microtubule organizing center
GO:0051726 P regulation of cell cycle
GO:0072686 C mitotic spindle
GO:0090063 P positive regulation of microtubule nucleation
GO:0090307 P mitotic spindle assembly
4302 O_BomoSK13873_internal:A_BomoSK_comp13390_c3_seq1
167bp
 PREDICTED:_lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_[Bombyx_mori]
GO:0001817 P regulation of cytokine production
GO:0004871 F obsolete signal transducer activity
GO:0005576 C extracellular region
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0007568 P aging
GO:0016020 C membrane
GO:0032496 P response to lipopolysaccharide
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 C intracellular membrane-bounded organelle
GO:0050699 F WW domain binding
GO:0071222 P cellular response to lipopolysaccharide
4303 O_BomoSK13874_internal:A_BomoSK_comp13391_c0_seq1
3775bp
 PREDICTED:_uncharacterized_protein_LOC101743290_[Bombyx_mori]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0016055 P Wnt signaling pathway
4304 O_BomoSK13875_5prime_partial:A_BomoSK_comp13391_c0_seq1
398bp
 ArsR_family_transcriptional_regulator_[Rhizobium_sp._Leaf371]
4305 O_BomoSK13876_complete:A_BomoSK_comp13391_c0_seq1
349bp
 carboxylate--amine_ligase_[Amycolatopsis_vancoresmycina]
4306 O_BomoSK13877_complete:A_BomoSK_comp13391_c0_seq1
142bp
 hypothetical_protein_TQ35_03835,_partial_[Sulfolobales_archaeon_AZ1]
4307 O_BomoSK13878_complete:A_BomoSK_comp13391_c0_seq1
121bp
 transposase,_partial_[Corynebacterium_glutamicum]
4308 O_BomoSK13879_complete:A_BomoSK_comp13392_c0_seq1
328bp
 PREDICTED:_probable_protein_phosphatase_2C_T23F11.1_[Amyelois_transitella]
GO:0003824 F catalytic activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0006470 P protein dephosphorylation
GO:0016787 F hydrolase activity
GO:0030517 P negative regulation of axon extension
GO:0031625 F ubiquitin protein ligase binding
GO:0043169 F cation binding
GO:0046872 F metal ion binding
GO:0048786 C presynaptic active zone
GO:0051965 P positive regulation of synapse assembly
4309 O_BomoSK1387_complete:A_BomoSK_comp4156_c0_seq1
103bp
4310 O_BomoSK13880_complete:A_BomoSK_comp13392_c0_seq1
106bp
 hypothetical_protein_PHAVU_002G091500g_[Phaseolus_vulgaris]
4311 O_BomoSK13881_complete:A_BomoSK_comp13393_c0_seq1
556bp
 PREDICTED:_zinc_finger_FYVE_domain-containing_protein_26_homolog_isoform_X1_[Bombyx_mori]
GO:0046872 F metal ion binding
4312 O_BomoSK13882_complete:A_BomoSK_comp13393_c0_seq1
128bp
4313 O_BomoSK13883_5prime_partial:A_BomoSK_comp13393_c0_seq2
642bp
 PREDICTED:_zinc_finger_FYVE_domain-containing_protein_26_homolog_isoform_X1_[Bombyx_mori]
GO:0046872 F metal ion binding
4314 O_BomoSK13884_complete:A_BomoSK_comp13393_c0_seq2
128bp
4315 O_BomoSK13885_3prime_partial:A_BomoSK_comp13394_c0_seq1
223bp
 PREDICTED:_serrate_RNA_effector_molecule_homolog_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0031047 P gene silencing by RNA
GO:0031053 P primary miRNA processing
4316 O_BomoSK13886_3prime_partial:A_BomoSK_comp13394_c0_seq2
478bp
 PREDICTED:_serrate_RNA_effector_molecule_homolog_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0031047 P gene silencing by RNA
GO:0031053 P primary miRNA processing
4317 O_BomoSK13887_complete:A_BomoSK_comp13394_c0_seq2
217bp
 PREDICTED:_serrate_RNA_effector_molecule_homolog_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0031047 P gene silencing by RNA
GO:0031053 P primary miRNA processing
4318 O_BomoSK13888_3prime_partial:A_BomoSK_comp13394_c0_seq3
478bp
 PREDICTED:_serrate_RNA_effector_molecule_homolog_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0031047 P gene silencing by RNA
GO:0031053 P primary miRNA processing
4319 O_BomoSK13889_complete:A_BomoSK_comp13394_c0_seq3
222bp
 PREDICTED:_serrate_RNA_effector_molecule_homolog_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0031047 P gene silencing by RNA
GO:0031053 P primary miRNA processing
4320 O_BomoSK1388_5prime_partial:A_BomoSK_comp4156_c0_seq1
102bp
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