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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3781 O_BomoSK13403_complete:A_BomoSK_comp13268_c0_seq2
143bp
 Transcription_elongation_factor_A_protein_2_[Auxenochlorella_protothecoides]
3782 O_BomoSK13404_3prime_partial:A_BomoSK_comp13268_c0_seq3
563bp
 putative_kakapo_[Danaus_plexippus]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005925 C focal adhesion
GO:0008092 F cytoskeletal protein binding
GO:0008307 F structural constituent of muscle
GO:0016528 C sarcoplasm
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030506 F ankyrin binding
GO:0031581 P hemidesmosome assembly
GO:0042383 C sarcolemma
GO:0043034 C costamere
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
GO:0070062 C extracellular exosome
3783 O_BomoSK13405_5prime_partial:A_BomoSK_comp13268_c0_seq3
218bp
3784 O_BomoSK13406_3prime_partial:A_BomoSK_comp13268_c0_seq3
203bp
3785 O_BomoSK13407_5prime_partial:A_BomoSK_comp13268_c0_seq3
156bp
 hypothetical_protein_[Aminiphilus_circumscriptus]
3786 O_BomoSK13408_complete:A_BomoSK_comp13268_c0_seq3
121bp
 acetyl-CoA_synthetase-like_protein_[Tilletiaria_anomala_UBC_951]
3787 O_BomoSK13409_internal:A_BomoSK_comp13269_c0_seq1
230bp
 PREDICTED:_uncharacterized_protein_LOC106126064_[Papilio_xuthus]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
3788 O_BomoSK1340_complete:A_BomoSK_comp4109_c0_seq2
1212bp
 PREDICTED:_biorientation_of_chromosomes_in_cell_division_protein_1-like_1_isoform_X1_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0051301 P cell division
3789 O_BomoSK13410_complete:A_BomoSK_comp13270_c0_seq1
314bp
 microvitellogenin-like_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
3790 O_BomoSK13411_complete:A_BomoSK_comp13272_c0_seq1
194bp
 PREDICTED:_target_of_rapamycin_complex_subunit_lst8_[Amyelois_transitella]
GO:0005737 C cytoplasm
3791 O_BomoSK13412_complete:A_BomoSK_comp13272_c0_seq1
132bp
 PREDICTED:_target_of_rapamycin_complex_subunit_lst8_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0008150 P biological_process
3792 O_BomoSK13413_5prime_partial:A_BomoSK_comp13272_c0_seq4
238bp
 PREDICTED:_target_of_rapamycin_complex_subunit_lst8_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
3793 O_BomoSK13414_complete:A_BomoSK_comp13272_c0_seq4
150bp
 hypothetical_protein_[Prochlorothrix_hollandica]
3794 O_BomoSK13415_complete:A_BomoSK_comp13272_c0_seq5
194bp
 PREDICTED:_target_of_rapamycin_complex_subunit_lst8_[Amyelois_transitella]
GO:0005737 C cytoplasm
3795 O_BomoSK13416_5prime_partial:A_BomoSK_comp13272_c0_seq6
201bp
 PREDICTED:_target_of_rapamycin_complex_subunit_lst8_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
3796 O_BomoSK13417_complete:A_BomoSK_comp13272_c0_seq6
132bp
 PREDICTED:_target_of_rapamycin_complex_subunit_lst8_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0008150 P biological_process
3797 O_BomoSK13418_5prime_partial:A_BomoSK_comp13272_c0_seq7
323bp
 PREDICTED:_target_of_rapamycin_complex_subunit_lst8_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
3798 O_BomoSK13419_complete:A_BomoSK_comp13272_c0_seq7
150bp
 hypothetical_protein_[Prochlorothrix_hollandica]
3799 O_BomoSK1341_complete:A_BomoSK_comp4109_c0_seq2
121bp
3800 O_BomoSK13420_5prime_partial:A_BomoSK_comp13272_c0_seq8
201bp
 PREDICTED:_target_of_rapamycin_complex_subunit_lst8_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
3801 O_BomoSK13421_complete:A_BomoSK_comp13272_c0_seq9
316bp
 PREDICTED:_target_of_rapamycin_complex_subunit_lst8_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
3802 O_BomoSK13422_complete:A_BomoSK_comp13272_c0_seq9
150bp
 hypothetical_protein_[Prochlorothrix_hollandica]
3803 O_BomoSK13423_complete:A_BomoSK_comp13272_c0_seq10
231bp
 PREDICTED:_target_of_rapamycin_complex_subunit_lst8_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
3804 O_BomoSK13424_complete:A_BomoSK_comp13272_c0_seq10
150bp
 hypothetical_protein_[Prochlorothrix_hollandica]
3805 O_BomoSK13425_complete:A_BomoSK_comp13273_c0_seq1
191bp
 PREDICTED:_UPF0430_protein_CG31712-like_isoform_X2_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3806 O_BomoSK13426_complete:A_BomoSK_comp13273_c0_seq1
131bp
3807 O_BomoSK13427_complete:A_BomoSK_comp13273_c0_seq1
119bp
3808 O_BomoSK13428_complete:A_BomoSK_comp13273_c0_seq1
108bp
 hypothetical_protein_BA92_09215_[Sanguibacteroides_justesenii]
3809 O_BomoSK13429_complete:A_BomoSK_comp13273_c0_seq2
254bp
 PREDICTED:_UPF0430_protein_CG31712-like_isoform_X2_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3810 O_BomoSK1342_complete:A_BomoSK_comp4109_c0_seq2
112bp
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