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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3481 O_BomoSK13133_5prime_partial:A_BomoSK_comp13207_c1_seq1
110bp
3482 O_BomoSK13134_5prime_partial:A_BomoSK_comp13207_c1_seq1
104bp
3483 O_BomoSK13135_complete:A_BomoSK_comp13208_c0_seq1
768bp
 PREDICTED:_peroxidase-like_[Amyelois_transitella]
GO:0004601 F peroxidase activity
GO:0005506 F iron ion binding
GO:0005576 C extracellular region
GO:0006909 P phagocytosis
GO:0006979 P response to oxidative stress
GO:0007306 P eggshell chorion assembly
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0022008 P neurogenesis
GO:0042600 C egg chorion
GO:0042744 P hydrogen peroxide catabolic process
GO:0045471 P response to ethanol
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
3484 O_BomoSK13136_complete:A_BomoSK_comp13208_c0_seq1
121bp
3485 O_BomoSK13137_complete:A_BomoSK_comp13208_c0_seq1
108bp
 hypothetical_protein_[Calothrix_sp._PCC_7103]
3486 O_BomoSK13138_complete:A_BomoSK_comp13208_c0_seq2
800bp
 PREDICTED:_peroxidase-like_[Amyelois_transitella]
GO:0004601 F peroxidase activity
GO:0005506 F iron ion binding
GO:0005576 C extracellular region
GO:0006909 P phagocytosis
GO:0006979 P response to oxidative stress
GO:0007306 P eggshell chorion assembly
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0022008 P neurogenesis
GO:0042600 C egg chorion
GO:0042744 P hydrogen peroxide catabolic process
GO:0045471 P response to ethanol
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
3487 O_BomoSK13139_complete:A_BomoSK_comp13208_c0_seq2
121bp
3488 O_BomoSK1313_complete:A_BomoSK_comp4082_c0_seq1
625bp
 PREDICTED:_zinc_finger_protein_592-like_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0046872 F metal ion binding
3489 O_BomoSK13140_complete:A_BomoSK_comp13208_c0_seq2
108bp
 hypothetical_protein_[Calothrix_sp._PCC_7103]
3490 O_BomoSK13141_3prime_partial:A_BomoSK_comp13208_c0_seq2
104bp
3491 O_BomoSK13142_complete:A_BomoSK_comp13210_c0_seq1
821bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_kintoun_[Bombyx_mori]
GO:0005737 C cytoplasm
3492 O_BomoSK13143_3prime_partial:A_BomoSK_comp13211_c0_seq1
565bp
 PREDICTED:_uncharacterized_protein_LOC101745243_[Bombyx_mori]
3493 O_BomoSK13144_complete:A_BomoSK_comp13211_c0_seq1
262bp
 hypothetical_protein_AMJ84_12805,_partial_[Acidithiobacillales_bacterium_SM23_46]
3494 O_BomoSK13145_3prime_partial:A_BomoSK_comp13211_c0_seq2
330bp
 PREDICTED:_uncharacterized_protein_LOC101745243_[Bombyx_mori]
GO:0005515 F protein binding
3495 O_BomoSK13146_5prime_partial:A_BomoSK_comp13211_c0_seq2
207bp
 hypothetical_protein_AMJ84_12805,_partial_[Acidithiobacillales_bacterium_SM23_46]
3496 O_BomoSK13147_5prime_partial:A_BomoSK_comp13211_c0_seq2
136bp
3497 O_BomoSK13148_complete:A_BomoSK_comp13212_c0_seq1
1193bp
 Dihydropyridine-sensitive_l-type_calcium_channel_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3498 O_BomoSK13149_3prime_partial:A_BomoSK_comp13213_c0_seq1
109bp
 putative_splicing_factor_pTSR1_[Danaus_plexippus]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
3499 O_BomoSK1314_complete:A_BomoSK_comp4083_c0_seq1
362bp
 PREDICTED:_kinesin-related_protein_4_[Bombyx_mori]
3500 O_BomoSK13150_3prime_partial:A_BomoSK_comp13213_c0_seq2
203bp
 putative_splicing_factor_pTSR1_[Danaus_plexippus]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
3501 O_BomoSK13151_3prime_partial:A_BomoSK_comp13213_c0_seq4
203bp
 putative_splicing_factor_pTSR1_[Danaus_plexippus]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
3502 O_BomoSK13152_3prime_partial:A_BomoSK_comp13213_c0_seq5
215bp
 PREDICTED:_putative_RNA-binding_protein_Luc7-like_2_isoform_X2_[Papilio_xuthus]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
3503 O_BomoSK13153_3prime_partial:A_BomoSK_comp13213_c0_seq6
109bp
 putative_splicing_factor_pTSR1_[Danaus_plexippus]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
3504 O_BomoSK13154_3prime_partial:A_BomoSK_comp13213_c0_seq7
109bp
 putative_splicing_factor_pTSR1_[Danaus_plexippus]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
3505 O_BomoSK13155_3prime_partial:A_BomoSK_comp13213_c0_seq8
109bp
 putative_splicing_factor_pTSR1_[Danaus_plexippus]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
3506 O_BomoSK13156_3prime_partial:A_BomoSK_comp13213_c0_seq9
256bp
 putative_splicing_factor_pTSR1_[Danaus_plexippus]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
3507 O_BomoSK13157_complete:A_BomoSK_comp13214_c0_seq1
589bp
 PREDICTED:_cationic_amino_acid_transporter_2_[Papilio_machaon]
GO:0000064 F L-ornithine transmembrane transporter activity
GO:0003333 P amino acid transmembrane transport
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015181 F L-arginine transmembrane transporter activity
GO:0015189 F L-lysine transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015809 P L-arginine transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1903352 P L-ornithine transmembrane transport
GO:1903401 P L-lysine transmembrane transport
GO:1903826 P L-arginine transmembrane transport
3508 O_BomoSK13158_complete:A_BomoSK_comp13217_c0_seq1
633bp
 ap_endonuclease_[Danaus_plexippus]
GO:0003677 F DNA binding
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008311 F double-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008408 F 3'-5' exonuclease activity
GO:0016829 F lyase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3509 O_BomoSK13159_complete:A_BomoSK_comp13217_c0_seq1
293bp
3510 O_BomoSK1315_complete:A_BomoSK_comp4083_c0_seq1
151bp
 hypothetical_protein_CLF_109839_[Clonorchis_sinensis]
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