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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3451 O_BomoSK13106_5prime_partial:A_BomoSK_comp13194_c0_seq1
172bp
3452 O_BomoSK13107_complete:A_BomoSK_comp13194_c0_seq1
133bp
 hCG2002091,_isoform_CRA_d_[Homo_sapiens]
3453 O_BomoSK13108_3prime_partial:A_BomoSK_comp13195_c0_seq1
531bp
 PREDICTED:_uncharacterized_protein_LOC101746875_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007015 P actin filament organization
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007568 P aging
GO:0008022 F protein C-terminus binding
GO:0008157 F protein phosphatase 1 binding
GO:0010976 P positive regulation of neuron projection development
GO:0014069 C postsynaptic density
GO:0015629 C actin cytoskeleton
GO:0019722 P calcium-mediated signaling
GO:0019901 F protein kinase binding
GO:0019904 F protein domain specific binding
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0030175 C filopodium
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030833 P regulation of actin filament polymerization
GO:0030864 C cortical actin cytoskeleton
GO:0031175 P neuron projection development
GO:0031594 C neuromuscular junction
GO:0032403 F protein-containing complex binding
GO:0042803 F protein homodimerization activity
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043197 C dendritic spine
GO:0044325 F transmembrane transporter binding
GO:0044326 C dendritic spine neck
GO:0045202 C synapse
GO:0045860 P positive regulation of protein kinase activity
GO:0048666 P neuron development
GO:0051015 F actin filament binding
GO:0051020 F GTPase binding
GO:0051489 P regulation of filopodium assembly
GO:0051497 P negative regulation of stress fiber assembly
GO:0051823 P regulation of synapse structural plasticity
GO:0051963 P regulation of synapse assembly
GO:0060079 P excitatory postsynaptic potential
GO:0060999 P positive regulation of dendritic spine development
GO:0061001 P regulation of dendritic spine morphogenesis
GO:0097237 P cellular response to toxic substance
GO:1900272 P negative regulation of long-term synaptic potentiation
GO:1900454 P positive regulation of long-term synaptic depression
GO:1904049 P negative regulation of spontaneous neurotransmitter secretion
GO:1990761 C growth cone lamellipodium
3454 O_BomoSK13109_complete:A_BomoSK_comp13195_c0_seq1
107bp
3455 O_BomoSK1310_internal:A_BomoSK_comp4080_c0_seq3
332bp
 PREDICTED:_receptor-mediated_endocytosis_protein_6_homolog_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005829 C cytosol
GO:0006897 P endocytosis
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0032483 P regulation of Rab protein signal transduction
GO:0032794 F GTPase activating protein binding
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0051223 P regulation of protein transport
3456 O_BomoSK13110_3prime_partial:A_BomoSK_comp13195_c0_seq2
1027bp
 PREDICTED:_uncharacterized_protein_LOC101746875_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007015 P actin filament organization
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007568 P aging
GO:0008022 F protein C-terminus binding
GO:0008157 F protein phosphatase 1 binding
GO:0010976 P positive regulation of neuron projection development
GO:0014069 C postsynaptic density
GO:0015629 C actin cytoskeleton
GO:0019722 P calcium-mediated signaling
GO:0019901 F protein kinase binding
GO:0019904 F protein domain specific binding
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0030175 C filopodium
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030833 P regulation of actin filament polymerization
GO:0030864 C cortical actin cytoskeleton
GO:0031175 P neuron projection development
GO:0031594 C neuromuscular junction
GO:0032403 F protein-containing complex binding
GO:0042803 F protein homodimerization activity
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043197 C dendritic spine
GO:0044325 F transmembrane transporter binding
GO:0044326 C dendritic spine neck
GO:0045202 C synapse
GO:0045860 P positive regulation of protein kinase activity
GO:0048666 P neuron development
GO:0051015 F actin filament binding
GO:0051020 F GTPase binding
GO:0051489 P regulation of filopodium assembly
GO:0051497 P negative regulation of stress fiber assembly
GO:0051823 P regulation of synapse structural plasticity
GO:0051963 P regulation of synapse assembly
GO:0060079 P excitatory postsynaptic potential
GO:0060999 P positive regulation of dendritic spine development
GO:0061001 P regulation of dendritic spine morphogenesis
GO:0097237 P cellular response to toxic substance
GO:1900272 P negative regulation of long-term synaptic potentiation
GO:1900454 P positive regulation of long-term synaptic depression
GO:1904049 P negative regulation of spontaneous neurotransmitter secretion
GO:1990761 C growth cone lamellipodium
3457 O_BomoSK13111_complete:A_BomoSK_comp13195_c0_seq2
119bp
 hypothetical_protein_[Nocardia_sp._BMG51109]
3458 O_BomoSK13112_complete:A_BomoSK_comp13195_c0_seq2
107bp
3459 O_BomoSK13113_complete:A_BomoSK_comp13195_c0_seq2
104bp
 putative_mif4g_domain-containing_protein_[Erysiphe_necator]
3460 O_BomoSK13114_complete:A_BomoSK_comp13196_c0_seq2
187bp
 PREDICTED:_uncharacterized_protein_LOC105841734_[Bombyx_mori]
3461 O_BomoSK13115_complete:A_BomoSK_comp13196_c0_seq3
623bp
 PREDICTED:_nose_resistant_to_fluoxetine_protein_6-like_[Bombyx_mori]
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
3462 O_BomoSK13116_5prime_partial:A_BomoSK_comp13197_c0_seq1
196bp
 PREDICTED:_integral_membrane_protein_GPR155_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005622 C intracellular anatomical structure
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035556 P intracellular signal transduction
GO:0050890 P cognition
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
3463 O_BomoSK13117_complete:A_BomoSK_comp13200_c0_seq1
309bp
 CRAL-TRIO_domain-containing_protein,_partial_[Manduca_sexta]
GO:0005215 F transporter activity
GO:0005622 C intracellular anatomical structure
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006810 P transport
GO:0007040 P lysosome organization
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
3464 O_BomoSK13118_complete:A_BomoSK_comp13200_c0_seq1
129bp
 hypothetical_protein_[Clostridium_butyricum]
3465 O_BomoSK13119_complete:A_BomoSK_comp13200_c0_seq2
323bp
 PREDICTED:_alpha-tocopherol_transfer_protein-like_isoform_X1_[Amyelois_transitella]
GO:0001523 P retinoid metabolic process
GO:0005215 F transporter activity
GO:0005502 F 11-cis retinal binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006776 P vitamin A metabolic process
GO:0006810 P transport
GO:0007601 P visual perception
GO:0016918 F retinal binding
GO:0019841 F retinol binding
GO:0044297 C cell body
GO:0050896 P response to stimulus
3466 O_BomoSK1311_5prime_partial:A_BomoSK_comp4080_c0_seq3
106bp
 putative_cell_surface_protein_[Lactobacillus_pentosus_MP-10]
3467 O_BomoSK13120_complete:A_BomoSK_comp13200_c0_seq2
129bp
 hypothetical_protein_[Clostridium_butyricum]
3468 O_BomoSK13121_complete:A_BomoSK_comp13201_c0_seq1
271bp
 PREDICTED:_cell_cycle_checkpoint_protein_RAD1_[Amyelois_transitella]
GO:0000077 P DNA damage checkpoint signaling
GO:0003684 F damaged DNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008408 F 3'-5' exonuclease activity
GO:0008853 F exodeoxyribonuclease III activity
GO:0016787 F hydrolase activity
GO:0021762 P substantia nigra development
GO:0030896 C checkpoint clamp complex
GO:0043231 C intracellular membrane-bounded organelle
GO:0051598 P meiotic recombination checkpoint signaling
GO:0071479 P cellular response to ionizing radiation
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3469 O_BomoSK13122_complete:A_BomoSK_comp13201_c0_seq2
271bp
 PREDICTED:_cell_cycle_checkpoint_protein_RAD1_[Amyelois_transitella]
GO:0000077 P DNA damage checkpoint signaling
GO:0003684 F damaged DNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008408 F 3'-5' exonuclease activity
GO:0008853 F exodeoxyribonuclease III activity
GO:0016787 F hydrolase activity
GO:0021762 P substantia nigra development
GO:0030896 C checkpoint clamp complex
GO:0043231 C intracellular membrane-bounded organelle
GO:0051598 P meiotic recombination checkpoint signaling
GO:0071479 P cellular response to ionizing radiation
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3470 O_BomoSK13123_complete:A_BomoSK_comp13201_c0_seq2
150bp
 PREDICTED:_zinc_finger_SWIM_domain-containing_protein_7-like_[Papilio_xuthus]
GO:0000724 P double-strand break repair via homologous recombination
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
3471 O_BomoSK13124_complete:A_BomoSK_comp13202_c0_seq1
674bp
 PREDICTED:_uncharacterized_protein_LOC106138999_[Amyelois_transitella]
3472 O_BomoSK13125_complete:A_BomoSK_comp13202_c0_seq1
124bp
3473 O_BomoSK13126_5prime_partial:A_BomoSK_comp13203_c0_seq1
161bp
 PREDICTED:_integrin-linked_protein_kinase_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0001558 P regulation of cell growth
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0001725 C stress fiber
GO:0001954 P positive regulation of cell-matrix adhesion
GO:0003151 P outflow tract morphogenesis
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006468 P protein phosphorylation
GO:0006469 P negative regulation of protein kinase activity
GO:0007050 P regulation of cell cycle
GO:0007160 P cell-matrix adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0007569 P cell aging
GO:0008283 P cell population proliferation
GO:0008284 P positive regulation of cell population proliferation
GO:0010667 P negative regulation of cardiac muscle cell apoptotic process
GO:0010761 P fibroblast migration
GO:0014044 P Schwann cell development
GO:0014912 P negative regulation of smooth muscle cell migration
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017124 F SH3 domain binding
GO:0018105 P peptidyl-serine phosphorylation
GO:0019901 F protein kinase binding
GO:0021675 P nerve development
GO:0022011 P myelination in peripheral nervous system
GO:0030017 C sarcomere
GO:0030027 C lamellipodium
GO:0030030 P cell projection organization
GO:0030054 C cell junction
GO:0030335 P positive regulation of cell migration
GO:0030424 C axon
GO:0030513 P positive regulation of BMP signaling pathway
GO:0031012 C extracellular matrix
GO:0032288 P myelin assembly
GO:0032956 P regulation of actin cytoskeleton organization
GO:0034329 P cell junction assembly
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0042327 P positive regulation of phosphorylation
GO:0042995 C cell projection
GO:0043025 C neuronal cell body
GO:0043034 C costamere
GO:0043066 P negative regulation of apoptotic process
GO:0043195 C terminal bouton
GO:0043198 C dendritic shaft
GO:0043206 P supramolecular fiber organization
GO:0043234 C protein-containing complex
GO:0043406 P positive regulation of MAP kinase activity
GO:0043410 P positive regulation of MAPK cascade
GO:0043491 P protein kinase B signaling
GO:0043524 P negative regulation of neuron apoptotic process
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045663 P positive regulation of myoblast differentiation
GO:0045669 P positive regulation of osteoblast differentiation
GO:0045773 P positive regulation of axon extension
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0048812 P neuron projection morphogenesis
GO:0050772 P positive regulation of axonogenesis
GO:0050775 P positive regulation of dendrite morphogenesis
GO:0051291 P protein heterooligomerization
GO:0051897 P positive regulation of protein kinase B signaling
GO:0070527 P platelet aggregation
GO:0090263 P positive regulation of canonical Wnt signaling pathway
GO:2000178 P negative regulation of neural precursor cell proliferation
3474 O_BomoSK13127_5prime_partial:A_BomoSK_comp13203_c0_seq1
116bp
3475 O_BomoSK13128_complete:A_BomoSK_comp13204_c0_seq1
255bp
 PREDICTED:_uncharacterized_protein_LOC101741741_[Bombyx_mori]
3476 O_BomoSK13129_complete:A_BomoSK_comp13204_c0_seq1
122bp
3477 O_BomoSK1312_5prime_partial:A_BomoSK_comp4080_c0_seq3
103bp
 DNA-binding_transcriptional_regulator_[Actinomyces_naeslundii]
3478 O_BomoSK13130_complete:A_BomoSK_comp13205_c0_seq1
187bp
 PREDICTED:_uncharacterized_protein_LOC105841989_[Bombyx_mori]
3479 O_BomoSK13131_complete:A_BomoSK_comp13205_c0_seq2
451bp
 major_royal_jelly_protein_1-like_precursor_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0031640 P killing of cells of another organism
GO:0042742 P defense response to bacterium
GO:0048650 P caste determination, influence by environmental factors
GO:0050829 P defense response to Gram-negative bacterium
GO:0050830 P defense response to Gram-positive bacterium
GO:0050832 P defense response to fungus
3480 O_BomoSK13132_complete:A_BomoSK_comp13206_c0_seq1
310bp
 PREDICTED:_endonuclease_G,_mitochondrial,_partial_[Bombyx_mori]
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004520 F endodeoxyribonuclease activity
GO:0004521 F endoribonuclease activity
GO:0005739 C mitochondrion
GO:0006309 P apoptotic DNA fragmentation
GO:0006401 P RNA catabolic process
GO:0006915 P apoptotic process
GO:0016787 F hydrolase activity
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
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