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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3511 O_BomoSK13160_complete:A_BomoSK_comp13217_c0_seq1
104bp
 PREDICTED:_uncharacterized_protein_CG3556_[Tribolium_castaneum]
3512 O_BomoSK13161_complete:A_BomoSK_comp13217_c0_seq2
335bp
 ap_endonuclease_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007018 P microtubule-based movement
GO:0008152 P metabolic process
GO:0016887 F ATP hydrolysis activity
GO:0030286 C dynein complex
3513 O_BomoSK13162_complete:A_BomoSK_comp13217_c0_seq2
180bp
3514 O_BomoSK13163_internal:A_BomoSK_comp13218_c0_seq1
148bp
 PREDICTED:_1-phosphatidylinositol_3-phosphate_5-kinase-like_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000285 F 1-phosphatidylinositol-3-phosphate 5-kinase activity
GO:0005524 F ATP binding
GO:0016301 F kinase activity
GO:0016307 F phosphatidylinositol phosphate kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046488 P phosphatidylinositol metabolic process
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0090332 P stomatal closure
3515 O_BomoSK13164_5prime_partial:A_BomoSK_comp13218_c0_seq1
146bp
3516 O_BomoSK13165_complete:A_BomoSK_comp13220_c0_seq1
390bp
 pleiohomeotic_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000400 F four-way junction DNA binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001158 F cis-regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006974 P cellular response to DNA damage stimulus
GO:0007283 P spermatogenesis
GO:0008270 F zinc ion binding
GO:0010225 P response to UV-C
GO:0010629 P negative regulation of gene expression
GO:0016363 C nuclear matrix
GO:0030154 P cell differentiation
GO:0031011 C Ino80 complex
GO:0034644 P cellular response to UV
GO:0044212 F transcription cis-regulatory region binding
GO:0046332 F SMAD binding
GO:0046872 F metal ion binding
3517 O_BomoSK13166_complete:A_BomoSK_comp13220_c0_seq1
124bp
 glycosyl_transferase_[Colwellia_sp._MT2012]
3518 O_BomoSK13167_complete:A_BomoSK_comp13220_c0_seq1
109bp
 hypothetical_protein_PVAR5_8815_[Byssochlamys_spectabilis_No._5]
3519 O_BomoSK13168_complete:A_BomoSK_comp13221_c0_seq1
244bp
 PREDICTED:_postreplication_repair_E3_ubiquitin-protein_ligase_RAD18-like_isoform_X1_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005575 C cellular_component
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
3520 O_BomoSK13169_complete:A_BomoSK_comp13221_c0_seq1
231bp
 PREDICTED:_postreplication_repair_E3_ubiquitin-protein_ligase_RAD18-like_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016605 C PML body
GO:0016874 F ligase activity
GO:0030521 P androgen receptor signaling pathway
GO:0031491 F nucleosome binding
GO:0032184 F SUMO polymer binding
GO:0033234 P negative regulation of protein sumoylation
GO:0033768 C SUMO-targeted ubiquitin ligase complex
GO:0042802 F identical protein binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046685 P response to arsenic-containing substance
GO:0046872 F metal ion binding
GO:0050681 F androgen receptor binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
GO:0070979 P protein K11-linked ubiquitination
GO:0085020 P protein K6-linked ubiquitination
GO:0090169 P regulation of spindle assembly
GO:0090234 P regulation of kinetochore assembly
3521 O_BomoSK1316_complete:A_BomoSK_comp4083_c0_seq2
385bp
 PREDICTED:_kinesin-related_protein_4_[Bombyx_mori]
3522 O_BomoSK13170_complete:A_BomoSK_comp13221_c0_seq2
231bp
 PREDICTED:_postreplication_repair_E3_ubiquitin-protein_ligase_RAD18-like_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016605 C PML body
GO:0016874 F ligase activity
GO:0030521 P androgen receptor signaling pathway
GO:0031491 F nucleosome binding
GO:0032184 F SUMO polymer binding
GO:0033234 P negative regulation of protein sumoylation
GO:0033768 C SUMO-targeted ubiquitin ligase complex
GO:0042802 F identical protein binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046685 P response to arsenic-containing substance
GO:0046872 F metal ion binding
GO:0050681 F androgen receptor binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
GO:0070979 P protein K11-linked ubiquitination
GO:0085020 P protein K6-linked ubiquitination
GO:0090169 P regulation of spindle assembly
GO:0090234 P regulation of kinetochore assembly
3523 O_BomoSK13171_complete:A_BomoSK_comp13221_c0_seq3
231bp
 PREDICTED:_postreplication_repair_E3_ubiquitin-protein_ligase_RAD18-like_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016605 C PML body
GO:0016874 F ligase activity
GO:0030521 P androgen receptor signaling pathway
GO:0031491 F nucleosome binding
GO:0032184 F SUMO polymer binding
GO:0033234 P negative regulation of protein sumoylation
GO:0033768 C SUMO-targeted ubiquitin ligase complex
GO:0042802 F identical protein binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046685 P response to arsenic-containing substance
GO:0046872 F metal ion binding
GO:0050681 F androgen receptor binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
GO:0070979 P protein K11-linked ubiquitination
GO:0085020 P protein K6-linked ubiquitination
GO:0090169 P regulation of spindle assembly
GO:0090234 P regulation of kinetochore assembly
3524 O_BomoSK13172_complete:A_BomoSK_comp13221_c0_seq4
244bp
 PREDICTED:_postreplication_repair_E3_ubiquitin-protein_ligase_RAD18-like_isoform_X1_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005575 C cellular_component
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
3525 O_BomoSK13173_complete:A_BomoSK_comp13221_c0_seq4
231bp
 PREDICTED:_postreplication_repair_E3_ubiquitin-protein_ligase_RAD18-like_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016605 C PML body
GO:0016874 F ligase activity
GO:0030521 P androgen receptor signaling pathway
GO:0031491 F nucleosome binding
GO:0032184 F SUMO polymer binding
GO:0033234 P negative regulation of protein sumoylation
GO:0033768 C SUMO-targeted ubiquitin ligase complex
GO:0042802 F identical protein binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046685 P response to arsenic-containing substance
GO:0046872 F metal ion binding
GO:0050681 F androgen receptor binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
GO:0070979 P protein K11-linked ubiquitination
GO:0085020 P protein K6-linked ubiquitination
GO:0090169 P regulation of spindle assembly
GO:0090234 P regulation of kinetochore assembly
3526 O_BomoSK13174_complete:A_BomoSK_comp13222_c0_seq1
479bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_1_[Papilio_xuthus]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006282 P regulation of DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0009411 P response to UV
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0035520 P monoubiquitinated protein deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
3527 O_BomoSK13175_complete:A_BomoSK_comp13222_c0_seq1
111bp
 autophagy-related_protein_[Rhizoctonia_solani_AG-3_Rhs1AP]
3528 O_BomoSK13176_complete:A_BomoSK_comp13222_c0_seq2
597bp
 PREDICTED:_pyruvate_kinase-like_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0003824 F catalytic activity
GO:0004743 F pyruvate kinase activity
GO:0005524 F ATP binding
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0006090 P pyruvate metabolic process
GO:0006096 P glycolytic process
GO:0007520 P myoblast fusion
GO:0007525 P somatic muscle development
GO:0009744 P response to sucrose
GO:0010906 P regulation of glucose metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030955 F potassium ion binding
GO:0043186 C P granule
GO:0046872 F metal ion binding
3529 O_BomoSK13177_complete:A_BomoSK_comp13222_c0_seq2
264bp
 YA37B_YEAST_RecName:_Full=Putative_uncharacterized_protein_YAL037C-B
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3530 O_BomoSK13178_complete:A_BomoSK_comp13222_c0_seq3
243bp
 putative_ubiquitin_specific_protease_[Danaus_plexippus]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006282 P regulation of DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0009411 P response to UV
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0035520 P monoubiquitinated protein deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
3531 O_BomoSK13179_complete:A_BomoSK_comp13222_c0_seq4
524bp
 PREDICTED:_pyruvate_kinase-like_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0003824 F catalytic activity
GO:0004743 F pyruvate kinase activity
GO:0005524 F ATP binding
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0006090 P pyruvate metabolic process
GO:0006096 P glycolytic process
GO:0007520 P myoblast fusion
GO:0007525 P somatic muscle development
GO:0009744 P response to sucrose
GO:0010906 P regulation of glucose metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030955 F potassium ion binding
GO:0043186 C P granule
GO:0046872 F metal ion binding
3532 O_BomoSK1317_complete:A_BomoSK_comp4083_c0_seq2
151bp
 hypothetical_protein_CLF_109839_[Clonorchis_sinensis]
3533 O_BomoSK13180_complete:A_BomoSK_comp13222_c0_seq4
264bp
 YA37B_YEAST_RecName:_Full=Putative_uncharacterized_protein_YAL037C-B
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3534 O_BomoSK13181_complete:A_BomoSK_comp13222_c0_seq5
597bp
 PREDICTED:_pyruvate_kinase-like_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0003824 F catalytic activity
GO:0004743 F pyruvate kinase activity
GO:0005524 F ATP binding
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0006090 P pyruvate metabolic process
GO:0006096 P glycolytic process
GO:0007520 P myoblast fusion
GO:0007525 P somatic muscle development
GO:0009744 P response to sucrose
GO:0010906 P regulation of glucose metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030955 F potassium ion binding
GO:0043186 C P granule
GO:0046872 F metal ion binding
3535 O_BomoSK13182_complete:A_BomoSK_comp13222_c0_seq5
323bp
 Ubiquitin_carboxyl-terminal_hydrolase_1_[Papilio_xuthus]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006282 P regulation of DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0009411 P response to UV
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0035520 P monoubiquitinated protein deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
3536 O_BomoSK13183_complete:A_BomoSK_comp13222_c0_seq5
264bp
 YA37B_YEAST_RecName:_Full=Putative_uncharacterized_protein_YAL037C-B
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3537 O_BomoSK13184_complete:A_BomoSK_comp13222_c0_seq5
111bp
 autophagy-related_protein_[Rhizoctonia_solani_AG-3_Rhs1AP]
3538 O_BomoSK13185_complete:A_BomoSK_comp13222_c0_seq6
635bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_1_[Papilio_xuthus]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006282 P regulation of DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0009411 P response to UV
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0035520 P monoubiquitinated protein deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
3539 O_BomoSK13186_complete:A_BomoSK_comp13222_c0_seq6
133bp
3540 O_BomoSK13187_complete:A_BomoSK_comp13222_c0_seq6
111bp
 autophagy-related_protein_[Rhizoctonia_solani_AG-3_Rhs1AP]
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