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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3331 O_BomoSK1299_5prime_partial:A_BomoSK_comp4075_c0_seq1
144bp
 male-specific_lethal_3_[Bombyx_mori]
GO:0000228 C nuclear chromosome
GO:0000805 C X chromosome
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007549 P dosage compensation
GO:0009047 P dosage compensation by hyperactivation of X chromosome
GO:0010369 C chromocenter
GO:0016456 C X chromosome located dosage compensation complex, transcription activating
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0019233 P sensory perception of pain
GO:0031936 P obsolete negative regulation of chromatin silencing
GO:0035064 F methylated histone binding
GO:0035206 P regulation of hemocyte proliferation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0072487 C MSL complex
3332 O_BomoSK129_3prime_partial:A_BomoSK_comp415_c0_seq1
152bp
 PREDICTED:_rotatin-like_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0007275 P multicellular organism development
GO:0007368 P determination of left/right symmetry
GO:0016021 C integral component of membrane
GO:0036064 C ciliary basal body
GO:0042995 C cell projection
GO:0044782 P cilium organization
3333 O_BomoSK12_complete:A_BomoSK_comp40_c0_seq1
112bp
 hypothetical_protein_[Pediococcus_ethanolidurans]
3334 O_BomoSK13000_5prime_partial:A_BomoSK_comp13159_c1_seq1
178bp
 PREDICTED:_axin_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007447 P imaginal disc pattern formation
GO:0007455 P eye-antennal disc morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007507 P heart development
GO:0008013 F beta-catenin binding
GO:0010941 P regulation of cell death
GO:0016055 P Wnt signaling pathway
GO:0019901 F protein kinase binding
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0035019 P somatic stem cell population maintenance
GO:0042594 P response to starvation
GO:0043547 P positive regulation of GTPase activity
GO:0048477 P oogenesis
3335 O_BomoSK13001_complete:A_BomoSK_comp13159_c1_seq1
101bp
 TonB-dependent_receptor_[Saprospira_grandis]
3336 O_BomoSK13002_complete:A_BomoSK_comp13159_c1_seq2
101bp
 TonB-dependent_receptor_[Saprospira_grandis]
3337 O_BomoSK13003_complete:A_BomoSK_comp13162_c0_seq1
258bp
 pyridoxine_5'-phosphate_oxidase_[Bombyx_mori]
GO:0002230 P positive regulation of defense response to virus by host
GO:0004733 F pyridoxamine-phosphate oxidase activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008615 P pyridoxine biosynthetic process
GO:0010181 F FMN binding
GO:0016491 F oxidoreductase activity
GO:0016638 F oxidoreductase activity, acting on the CH-NH2 group of donors
GO:0042823 P pyridoxal phosphate biosynthetic process
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
3338 O_BomoSK13004_5prime_partial:A_BomoSK_comp13163_c0_seq1
308bp
 PREDICTED:_uncharacterized_protein_LOC101737485_isoform_X2_[Bombyx_mori]
3339 O_BomoSK13005_5prime_partial:A_BomoSK_comp13163_c0_seq2
153bp
 PREDICTED:_uncharacterized_protein_LOC101737485_isoform_X2_[Bombyx_mori]
3340 O_BomoSK13006_internal:A_BomoSK_comp13164_c0_seq1
428bp
 Transposable_element_P_transposase_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003693 F P-element binding
GO:0004803 F transposase activity
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
3341 O_BomoSK13007_3prime_partial:A_BomoSK_comp13164_c0_seq3
328bp
 Transposable_element_P_transposase_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003693 F P-element binding
GO:0004803 F transposase activity
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
3342 O_BomoSK13008_3prime_partial:A_BomoSK_comp13166_c0_seq1
271bp
 PREDICTED:_uncharacterized_protein_LOC106117266_isoform_X3_[Papilio_xuthus]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
3343 O_BomoSK13009_3prime_partial:A_BomoSK_comp13166_c0_seq2
1333bp
 PREDICTED:_uncharacterized_protein_DDB_G0284459-like_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
3344 O_BomoSK1300_complete:A_BomoSK_comp4076_c0_seq1
278bp
 PREDICTED:_uncharacterized_protein_C1orf198_homolog_[Amyelois_transitella]
GO:0005737 C cytoplasm
3345 O_BomoSK13010_complete:A_BomoSK_comp13167_c1_seq2
144bp
 RNA_binding_motif_protein_18_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002230 P positive regulation of defense response to virus by host
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0098792 P xenophagy
3346 O_BomoSK13011_complete:A_BomoSK_comp13167_c1_seq3
194bp
 RNA_binding_motif_protein_18_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002230 P positive regulation of defense response to virus by host
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0098792 P xenophagy
3347 O_BomoSK13012_complete:A_BomoSK_comp13168_c0_seq1
331bp
 PREDICTED:_uncharacterized_protein_LOC106117228_isoform_X2_[Papilio_xuthus]
GO:0005375 F copper ion transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006825 P copper ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035434 P copper ion transmembrane transport
3348 O_BomoSK13013_complete:A_BomoSK_comp13169_c0_seq1
310bp
 PREDICTED:_cysteine-type_peptidase_isoform_X1_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
3349 O_BomoSK13014_5prime_partial:A_BomoSK_comp13170_c0_seq1
505bp
 PREDICTED:_uncharacterized_protein_LOC101742065_isoform_X1_[Bombyx_mori]
3350 O_BomoSK13015_complete:A_BomoSK_comp13170_c0_seq1
122bp
3351 O_BomoSK13016_complete:A_BomoSK_comp13170_c0_seq1
121bp
 uncharacterized_protein_Dana_GF19404_[Drosophila_ananassae]
3352 O_BomoSK13017_complete:A_BomoSK_comp13170_c0_seq1
104bp
 transketolase_[Herbidospora_cretacea]
3353 O_BomoSK13018_complete:A_BomoSK_comp13170_c0_seq1
100bp
 RNA_polymerase_sigma24_factor_[Kineococcus_radiotolerans]
3354 O_BomoSK13019_complete:A_BomoSK_comp13171_c0_seq1
115bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
3355 O_BomoSK1301_complete:A_BomoSK_comp4077_c0_seq1
134bp
 PREDICTED:_zinc_finger_protein_OZF-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
3356 O_BomoSK13020_5prime_partial:A_BomoSK_comp13172_c0_seq1
148bp
 PREDICTED:_uncharacterized_protein_LOC106109791_[Papilio_polytes]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
3357 O_BomoSK13021_5prime_partial:A_BomoSK_comp13172_c0_seq2
107bp
3358 O_BomoSK13022_complete:A_BomoSK_comp13173_c0_seq1
439bp
 vacuolar_protein_sorting_4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0007033 P vacuole organization
GO:0007049 P cell cycle
GO:0008152 P metabolic process
GO:0008568 F microtubule-severing ATPase activity
GO:0009838 P abscission
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016197 P endosomal transport
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0017048 F small GTPase binding
GO:0030496 C midbody
GO:0031122 P cytoplasmic microtubule organization
GO:0031902 C late endosome membrane
GO:0032466 P negative regulation of cytokinesis
GO:0051301 P cell division
GO:1903774 P positive regulation of viral budding via host ESCRT complex
3359 O_BomoSK13023_complete:A_BomoSK_comp13173_c0_seq1
118bp
 hypothetical_protein_[Fimbriimonas_ginsengisoli]
3360 O_BomoSK13024_complete:A_BomoSK_comp13173_c0_seq1
102bp
 hypothetical_protein_AWRI1631_164190_[Saccharomyces_cerevisiae_AWRI1631]
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