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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3301 O_BomoSK12972_5prime_partial:A_BomoSK_comp13148_c0_seq2
108bp
 putative_serine/threonine_protein_kinase_(fragment)_[Nocardia_cyriacigeorgica]
3302 O_BomoSK12973_5prime_partial:A_BomoSK_comp13149_c0_seq1
312bp
 coatomer_protein_complex_subunit_alpha_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005179 F hormone activity
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030126 C COPI vesicle coat
GO:0030663 C COPI-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
3303 O_BomoSK12974_5prime_partial:A_BomoSK_comp13150_c0_seq1
143bp
 PREDICTED:_uncharacterized_protein_LOC105842252_[Bombyx_mori]
3304 O_BomoSK12975_5prime_partial:A_BomoSK_comp13151_c0_seq1
743bp
 PREDICTED:_tubulin-specific_chaperone_D_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005923 C bicellular tight junction
GO:0006457 P protein folding
GO:0007021 P tubulin complex assembly
GO:0007023 P post-chaperonin tubulin folding pathway
GO:0010812 P negative regulation of cell-substrate adhesion
GO:0016020 C membrane
GO:0016328 C lateral plasma membrane
GO:0030054 C cell junction
GO:0031115 P negative regulation of microtubule polymerization
GO:0034333 P adherens junction assembly
GO:0043547 P positive regulation of GTPase activity
GO:0048487 F beta-tubulin binding
GO:0070830 P bicellular tight junction assembly
3305 O_BomoSK12976_complete:A_BomoSK_comp13151_c0_seq1
201bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_probable_G-protein_coupled_receptor_144_[Elephantulus_edwardii]
3306 O_BomoSK12977_complete:A_BomoSK_comp13151_c0_seq1
118bp
 UDP-N-acetylmuramoylalanine--D-glutamate_ligase_[Methyloversatilis_discipulorum]
3307 O_BomoSK12978_complete:A_BomoSK_comp13151_c0_seq1
115bp
 UDP-GlcNAc/Glc_4-epimerase_[Campylobacter_subantarcticus]
3308 O_BomoSK12979_3prime_partial:A_BomoSK_comp13151_c0_seq1
112bp
 hypothetical_protein,_unknown_function_[Leishmania_mexicana_MHOM/GT/2001/U1103]
3309 O_BomoSK1297_3prime_partial:A_BomoSK_comp4072_c0_seq1
295bp
 PREDICTED:_kynurenine_formamidase-like_[Bombyx_mori]
GO:0004061 F arylformamidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006569 P tryptophan catabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0019441 P tryptophan catabolic process to kynurenine
GO:0034354 P 'de novo' NAD biosynthetic process from tryptophan
3310 O_BomoSK12980_5prime_partial:A_BomoSK_comp13151_c0_seq4
743bp
 PREDICTED:_tubulin-specific_chaperone_D_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005923 C bicellular tight junction
GO:0006457 P protein folding
GO:0007021 P tubulin complex assembly
GO:0007023 P post-chaperonin tubulin folding pathway
GO:0010812 P negative regulation of cell-substrate adhesion
GO:0016020 C membrane
GO:0016328 C lateral plasma membrane
GO:0030054 C cell junction
GO:0031115 P negative regulation of microtubule polymerization
GO:0034333 P adherens junction assembly
GO:0043547 P positive regulation of GTPase activity
GO:0048487 F beta-tubulin binding
GO:0070830 P bicellular tight junction assembly
3311 O_BomoSK12981_complete:A_BomoSK_comp13151_c0_seq4
201bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_probable_G-protein_coupled_receptor_144_[Elephantulus_edwardii]
3312 O_BomoSK12982_complete:A_BomoSK_comp13151_c0_seq4
118bp
 UDP-N-acetylmuramoylalanine--D-glutamate_ligase_[Methyloversatilis_discipulorum]
3313 O_BomoSK12983_complete:A_BomoSK_comp13151_c0_seq4
115bp
 UDP-GlcNAc/Glc_4-epimerase_[Campylobacter_subantarcticus]
3314 O_BomoSK12984_3prime_partial:A_BomoSK_comp13151_c0_seq4
112bp
 hypothetical_protein,_unknown_function_[Leishmania_mexicana_MHOM/GT/2001/U1103]
3315 O_BomoSK12985_complete:A_BomoSK_comp13153_c0_seq1
719bp
 PREDICTED:_angiotensin-converting_enzyme-like_[Bombyx_mori]
GO:0004180 F carboxypeptidase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008241 F peptidyl-dipeptidase activity
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
3316 O_BomoSK12986_complete:A_BomoSK_comp13153_c0_seq2
719bp
 PREDICTED:_angiotensin-converting_enzyme-like_[Bombyx_mori]
GO:0004180 F carboxypeptidase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008241 F peptidyl-dipeptidase activity
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
3317 O_BomoSK12987_complete:A_BomoSK_comp13154_c0_seq1
674bp
 PREDICTED:_probable_protein_phosphatase_CG10417_isoform_X2_[Amyelois_transitella]
GO:0003824 F catalytic activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0016787 F hydrolase activity
GO:0043169 F cation binding
GO:0046872 F metal ion binding
3318 O_BomoSK12988_complete:A_BomoSK_comp13155_c0_seq1
711bp
 PREDICTED:_acylamino-acid-releasing_enzyme-like_isoform_X1_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
3319 O_BomoSK12989_complete:A_BomoSK_comp13155_c0_seq1
181bp
 acetyltransferase_[Streptomyces_lydicus]
3320 O_BomoSK1298_3prime_partial:A_BomoSK_comp4072_c0_seq2
156bp
 PREDICTED:_kynurenine_formamidase-like_[Bombyx_mori]
GO:0004061 F arylformamidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006569 P tryptophan catabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0019441 P tryptophan catabolic process to kynurenine
GO:0034354 P 'de novo' NAD biosynthetic process from tryptophan
3321 O_BomoSK12990_5prime_partial:A_BomoSK_comp13155_c0_seq2
521bp
 PREDICTED:_acylamino-acid-releasing_enzyme-like_isoform_X1_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
3322 O_BomoSK12991_complete:A_BomoSK_comp13155_c0_seq2
118bp
 phage_minor_tail_protein_L_[Chromobacterium_violaceum]
3323 O_BomoSK12992_complete:A_BomoSK_comp13156_c0_seq1
149bp
 Cappuccino-like_protein_[Operophtera_brumata]
3324 O_BomoSK12993_complete:A_BomoSK_comp13156_c0_seq2
149bp
 Cappuccino-like_protein_[Operophtera_brumata]
3325 O_BomoSK12994_complete:A_BomoSK_comp13156_c0_seq3
149bp
 Cappuccino-like_protein_[Operophtera_brumata]
3326 O_BomoSK12995_3prime_partial:A_BomoSK_comp13157_c0_seq1
359bp
 PREDICTED:_RNA-binding_protein_Nova-2_isoform_X3_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
3327 O_BomoSK12996_5prime_partial:A_BomoSK_comp13157_c0_seq1
119bp
3328 O_BomoSK12997_3prime_partial:A_BomoSK_comp13157_c0_seq2
338bp
 PREDICTED:_RNA-binding_protein_Nova-2_isoform_X6_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
3329 O_BomoSK12998_5prime_partial:A_BomoSK_comp13157_c0_seq2
119bp
3330 O_BomoSK12999_internal:A_BomoSK_comp13159_c1_seq1
181bp
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