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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
331 O_BomoSK10299_complete:A_BomoSK_comp12131_c0_seq2
171bp
 DNA_topoisomerase_I_[Microbacterium_oleivorans]
332 O_BomoSK1029_complete:A_BomoSK_comp3822_c0_seq1
304bp
333 O_BomoSK102_internal:A_BomoSK_comp380_c0_seq1
110bp
 Uncharacterized_protein_OBRU01_00555,_partial_[Operophtera_brumata]
334 O_BomoSK10300_complete:A_BomoSK_comp12131_c0_seq2
133bp
 unknown_[Zea_mays]
335 O_BomoSK10301_3prime_partial:A_BomoSK_comp12132_c0_seq1
255bp
 PREDICTED:_serine/arginine_repetitive_matrix_protein_1_isoform_X1_[Amyelois_transitella]
336 O_BomoSK10302_3prime_partial:A_BomoSK_comp12132_c0_seq2
249bp
 PREDICTED:_serine/arginine_repetitive_matrix_protein_1_isoform_X1_[Amyelois_transitella]
337 O_BomoSK10303_3prime_partial:A_BomoSK_comp12132_c0_seq3
249bp
 PREDICTED:_serine/arginine_repetitive_matrix_protein_1_isoform_X1_[Amyelois_transitella]
338 O_BomoSK10304_3prime_partial:A_BomoSK_comp12132_c0_seq4
255bp
 PREDICTED:_serine/arginine_repetitive_matrix_protein_1_isoform_X1_[Amyelois_transitella]
339 O_BomoSK10305_complete:A_BomoSK_comp12133_c0_seq1
285bp
 PREDICTED:_non-structural_maintenance_of_chromosomes_element_1_homolog_[Amyelois_transitella]
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006301 P postreplication repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030915 C Smc5-Smc6 complex
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
GO:2001022 P positive regulation of response to DNA damage stimulus
340 O_BomoSK10306_complete:A_BomoSK_comp12134_c0_seq1
593bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101740551_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004484 F mRNA guanylyltransferase activity
GO:0004651 F polynucleotide 5'-phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0006470 P protein dephosphorylation
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0008152 P metabolic process
GO:0008192 F RNA guanylyltransferase activity
GO:0016311 P dephosphorylation
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0050355 F triphosphatase activity
GO:0098507 P polynucleotide 5' dephosphorylation
341 O_BomoSK10307_complete:A_BomoSK_comp12135_c1_seq2
158bp
 PREDICTED:_adrenodoxin-like_[Plutella_xylostella]
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0009055 F electron transfer activity
GO:0042446 P hormone biosynthetic process
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
342 O_BomoSK10308_5prime_partial:A_BomoSK_comp12137_c0_seq1
540bp
 uncharacterized_protein_LOC101744449_[Bombyx_mori]
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006457 P protein folding
GO:0007275 P multicellular organism development
GO:0009408 P response to heat
GO:0016020 C membrane
GO:0031072 F heat shock protein binding
GO:0046872 F metal ion binding
GO:0051082 F unfolded protein binding
343 O_BomoSK10309_5prime_partial:A_BomoSK_comp12137_c0_seq2
482bp
 uncharacterized_protein_LOC101744449_[Bombyx_mori]
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006457 P protein folding
GO:0007275 P multicellular organism development
GO:0009408 P response to heat
GO:0016020 C membrane
GO:0031072 F heat shock protein binding
GO:0046872 F metal ion binding
GO:0051082 F unfolded protein binding
344 O_BomoSK1030_complete:A_BomoSK_comp3822_c0_seq1
145bp
345 O_BomoSK10310_5prime_partial:A_BomoSK_comp12137_c0_seq4
443bp
 uncharacterized_protein_LOC101744449_[Bombyx_mori]
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006457 P protein folding
GO:0007275 P multicellular organism development
GO:0009408 P response to heat
GO:0016020 C membrane
GO:0031072 F heat shock protein binding
GO:0046872 F metal ion binding
GO:0051082 F unfolded protein binding
346 O_BomoSK10311_complete:A_BomoSK_comp12138_c0_seq1
298bp
 PREDICTED:_7-methylguanosine_phosphate-specific_5'-nucleotidase_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008252 F nucleotidase activity
GO:0008253 F 5'-nucleotidase activity
GO:0009117 P nucleotide metabolic process
GO:0009158 P ribonucleoside monophosphate catabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:1901069 P guanosine-containing compound catabolic process
347 O_BomoSK10312_internal:A_BomoSK_comp12141_c1_seq1
364bp
 PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_1_[Amyelois_transitella]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
348 O_BomoSK10313_5prime_partial:A_BomoSK_comp12141_c1_seq1
154bp
 30S_ribosomal_protein_S8_[Kiloniella_laminariae]
349 O_BomoSK10314_5prime_partial:A_BomoSK_comp12141_c2_seq1
700bp
 Mediator_of_RNA_polymerase_II_transcription_subunit_1_[Papilio_machaon]
350 O_BomoSK10315_complete:A_BomoSK_comp12142_c0_seq2
240bp
 PREDICTED:_cytochrome_P450_Cyp6b29_isoform_X1_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070330 F aromatase activity
351 O_BomoSK10316_complete:A_BomoSK_comp12142_c0_seq2
130bp
 PREDICTED:_cytochrome_P450_Cyp6b29_isoform_X1_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070330 F aromatase activity
352 O_BomoSK10317_complete:A_BomoSK_comp12142_c0_seq2
110bp
 cytochrome_P450_Cyp6b29_[Bombyx_mandarina]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070330 F aromatase activity
353 O_BomoSK10318_5prime_partial:A_BomoSK_comp12143_c0_seq1
227bp
 PREDICTED:_chondroitin_sulfate_synthase_1_[Bombyx_mori]
GO:0002063 P chondrocyte development
GO:0005576 C extracellular region
GO:0005794 C Golgi apparatus
GO:0008376 F acetylgalactosaminyltransferase activity
GO:0009954 P proximal/distal pattern formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0030279 P negative regulation of ossification
GO:0031667 P response to nutrient levels
GO:0032580 C Golgi cisterna membrane
GO:0045880 P positive regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
GO:0047238 F glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity
GO:0050510 F N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
GO:0051216 P cartilage development
GO:0051923 P sulfation
GO:0060349 P bone morphogenesis
354 O_BomoSK10319_5prime_partial:A_BomoSK_comp12144_c0_seq1
436bp
 PREDICTED:_E3_ubiquitin-protein_ligase_Topors-like_[Papilio_xuthus]
GO:0000209 P protein polyubiquitination
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005652 C nuclear lamina
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006997 P nucleus organization
GO:0007060 P male meiosis chromosome segregation
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007140 P male meiotic nuclear division
GO:0008270 F zinc ion binding
GO:0010032 P meiotic chromosome condensation
GO:0016568 P chromatin organization
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0051299 P centrosome separation
GO:0061630 F ubiquitin protein ligase activity
GO:0071763 P nuclear membrane organization
355 O_BomoSK1031_complete:A_BomoSK_comp3822_c0_seq1
118bp
356 O_BomoSK10320_complete:A_BomoSK_comp12145_c0_seq1
595bp
 PREDICTED:_alkylated_DNA_repair_protein_alkB_homolog_8_[Plutella_xylostella]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0002098 P tRNA wobble uridine modification
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0005506 F iron ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016300 F tRNA (uracil) methyltransferase activity
GO:0016491 F oxidoreductase activity
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
357 O_BomoSK10321_complete:A_BomoSK_comp12145_c0_seq1
238bp
 hypothetical_protein_MELLADRAFT_38934_[Melampsora_larici-populina_98AG31]
358 O_BomoSK10322_3prime_partial:A_BomoSK_comp12145_c0_seq1
193bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_serine_palmitoyltransferase_2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004758 F serine C-palmitoyltransferase activity
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0006686 P sphingomyelin biosynthetic process
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0017059 C serine C-palmitoyltransferase complex
GO:0030148 P sphingolipid biosynthetic process
GO:0030170 F pyridoxal phosphate binding
GO:0046511 P sphinganine biosynthetic process
GO:0046512 P sphingosine biosynthetic process
GO:0046513 P ceramide biosynthetic process
GO:1904504 P positive regulation of lipophagy
359 O_BomoSK10323_complete:A_BomoSK_comp12145_c0_seq1
175bp
 hypothetical_protein_[Tepidiphilus_margaritifer]
360 O_BomoSK10324_5prime_partial:A_BomoSK_comp12145_c0_seq1
111bp
 nuclease_PIN_[Sphingomonas_sp._Leaf208]
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