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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
301 O_BomoSK10271_complete:A_BomoSK_comp12117_c0_seq2
295bp
 PREDICTED:_omega-amidase_NIT2_isoform_X1_[Papilio_polytes]
GO:0005737 C cytoplasm
GO:0006807 P nitrogen compound metabolic process
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0050152 F omega-amidase activity
302 O_BomoSK10272_complete:A_BomoSK_comp12117_c0_seq2
105bp
 putative_ABC_transporter_ATP-binding_protein_[Rhodococcus_pyridinivorans_AK37]
303 O_BomoSK10273_complete:A_BomoSK_comp12120_c0_seq1
1176bp
 DNA-directed_RNA_polymerase_[Operophtera_brumata]
GO:0001055 F RNA polymerase II activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0006351 P transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0032549 F ribonucleoside binding
GO:0046872 F metal ion binding
304 O_BomoSK10274_5prime_partial:A_BomoSK_comp12121_c0_seq1
1304bp
 PREDICTED:_nipped-B-like_protein_A_[Bombyx_mori]
GO:0000795 C synaptonemal complex
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0008278 C cohesin complex
GO:0010468 P regulation of gene expression
GO:0010628 P positive regulation of gene expression
GO:0032116 C SMC loading complex
GO:0034088 P maintenance of mitotic sister chromatid cohesion
GO:0035327 C euchromatin
GO:0043234 C protein-containing complex
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0070193 P synaptonemal complex organization
GO:0071733 P obsolete transcriptional activation by promoter-enhancer looping
305 O_BomoSK10275_complete:A_BomoSK_comp12121_c0_seq1
165bp
306 O_BomoSK10276_complete:A_BomoSK_comp12121_c0_seq1
161bp
307 O_BomoSK10277_complete:A_BomoSK_comp12124_c0_seq1
117bp
308 O_BomoSK10278_complete:A_BomoSK_comp12124_c0_seq1
105bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC105841908_[Bombyx_mori]
309 O_BomoSK10279_complete:A_BomoSK_comp12125_c0_seq2
676bp
 PREDICTED:_sn1-specific_diacylglycerol_lipase_beta_isoform_X2_[Plutella_xylostella]
GO:0005765 C lysosomal membrane
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0007405 P neuroblast proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0019369 P arachidonic acid metabolic process
GO:0022008 P neurogenesis
GO:0042136 P neurotransmitter biosynthetic process
GO:0046872 F metal ion binding
GO:0047372 F acylglycerol lipase activity
310 O_BomoSK1027_complete:A_BomoSK_comp3819_c0_seq1
318bp
 PREDICTED:_2-oxoglutarate_and_iron-dependent_oxygenase_domain-containing_protein_3-like_[Papilio_polytes]
GO:0005506 F iron ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0031418 F L-ascorbic acid binding
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
311 O_BomoSK10280_complete:A_BomoSK_comp12125_c0_seq2
106bp
 type_IV_secretion_system_protein_VirB9_[Rhizobacter_sp._Root404]
312 O_BomoSK10281_3prime_partial:A_BomoSK_comp12126_c0_seq1
116bp
 PREDICTED:_uncharacterized_protein_LOC105841800_[Bombyx_mori]
313 O_BomoSK10282_5prime_partial:A_BomoSK_comp12126_c0_seq1
104bp
314 O_BomoSK10283_3prime_partial:A_BomoSK_comp12126_c0_seq2
204bp
 PREDICTED:_uncharacterized_protein_LOC105841800_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0042802 F identical protein binding
315 O_BomoSK10284_5prime_partial:A_BomoSK_comp12126_c0_seq2
104bp
316 O_BomoSK10285_complete:A_BomoSK_comp12128_c0_seq1
179bp
 PREDICTED:_uncharacterized_protein_LOC101742672_[Bombyx_mori]
317 O_BomoSK10286_complete:A_BomoSK_comp12128_c0_seq2
218bp
 PREDICTED:_uncharacterized_protein_LOC101742672_[Bombyx_mori]
318 O_BomoSK10287_5prime_partial:A_BomoSK_comp12128_c0_seq3
106bp
 PREDICTED:_uncharacterized_protein_LOC101742672_[Bombyx_mori]
319 O_BomoSK10288_5prime_partial:A_BomoSK_comp12128_c0_seq4
197bp
 PREDICTED:_uncharacterized_protein_LOC101742672_[Bombyx_mori]
320 O_BomoSK10289_5prime_partial:A_BomoSK_comp12128_c0_seq5
236bp
 PREDICTED:_uncharacterized_protein_LOC101742672_[Bombyx_mori]
321 O_BomoSK1028_3prime_partial:A_BomoSK_comp3822_c0_seq1
627bp
 PREDICTED:_probable_cleavage_and_polyadenylation_specificity_factor_subunit_2,_partial_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0006398 P mRNA 3'-end processing by stem-loop binding and cleavage
GO:0022008 P neurogenesis
322 O_BomoSK10290_5prime_partial:A_BomoSK_comp12129_c0_seq1
238bp
 PREDICTED:_WD_repeat-containing_and_planar_cell_polarity_effector_protein_fritz_homolog_isoform_X2_[Bombyx_mori]
323 O_BomoSK10291_5prime_partial:A_BomoSK_comp12129_c0_seq1
100bp
324 O_BomoSK10292_5prime_partial:A_BomoSK_comp12130_c0_seq1
383bp
 sex_combs_on_midleg_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007409 P axonogenesis
GO:0007419 P ventral cord development
GO:0008270 F zinc ion binding
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0022008 P neurogenesis
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030713 P ovarian follicle cell stalk formation
GO:0035102 C PRC1 complex
GO:0042802 F identical protein binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045926 P negative regulation of growth
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
325 O_BomoSK10293_3prime_partial:A_BomoSK_comp12130_c1_seq1
251bp
 sex_combs_on_midleg_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007409 P axonogenesis
GO:0007419 P ventral cord development
GO:0008270 F zinc ion binding
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0022008 P neurogenesis
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030713 P ovarian follicle cell stalk formation
GO:0035102 C PRC1 complex
GO:0042802 F identical protein binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045926 P negative regulation of growth
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
326 O_BomoSK10294_5prime_partial:A_BomoSK_comp12130_c1_seq1
103bp
 hypothetical_protein_ALC53_13385,_partial_[Atta_colombica]
327 O_BomoSK10295_3prime_partial:A_BomoSK_comp12131_c0_seq1
1215bp
 PREDICTED:_carboxypeptidase_D_isoform_X3_[Bombyx_mori]
GO:0004180 F carboxypeptidase activity
GO:0004181 F metallocarboxypeptidase activity
GO:0004185 F serine-type carboxypeptidase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0006518 P peptide metabolic process
GO:0006909 P phagocytosis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007616 P long-term memory
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0040003 P chitin-based cuticle development
GO:0042302 F structural constituent of cuticle
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
328 O_BomoSK10296_complete:A_BomoSK_comp12131_c0_seq1
171bp
 DNA_topoisomerase_I_[Microbacterium_oleivorans]
329 O_BomoSK10297_complete:A_BomoSK_comp12131_c0_seq1
133bp
 unknown_[Zea_mays]
330 O_BomoSK10298_3prime_partial:A_BomoSK_comp12131_c0_seq2
1238bp
 PREDICTED:_carboxypeptidase_D_isoform_X1_[Bombyx_mori]
GO:0004180 F carboxypeptidase activity
GO:0004181 F metallocarboxypeptidase activity
GO:0004185 F serine-type carboxypeptidase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0006518 P peptide metabolic process
GO:0006909 P phagocytosis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007616 P long-term memory
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0040003 P chitin-based cuticle development
GO:0042302 F structural constituent of cuticle
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
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