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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3271 O_BomoSK12945_complete:A_BomoSK_comp13140_c0_seq1
118bp
 PREDICTED:_protein_phosphatase_Slingshot_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003779 F actin binding
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006470 P protein dephosphorylation
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0010591 P regulation of lamellipodium assembly
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030036 P actin cytoskeleton organization
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0050770 P regulation of axonogenesis
3272 O_BomoSK12946_3prime_partial:A_BomoSK_comp13140_c0_seq2
623bp
 PREDICTED:_protein_phosphatase_Slingshot_[Bombyx_mori]
GO:0000188 P obsolete inactivation of MAPK activity
GO:0000278 P mitotic cell cycle
GO:0000902 P cell morphogenesis
GO:0003677 F DNA binding
GO:0003779 F actin binding
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006470 P protein dephosphorylation
GO:0007409 P axonogenesis
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0008330 F protein tyrosine/threonine phosphatase activity
GO:0010591 P regulation of lamellipodium assembly
GO:0016311 P dephosphorylation
GO:0016319 P mushroom body development
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0017017 F MAP kinase tyrosine/serine/threonine phosphatase activity
GO:0030036 P actin cytoskeleton organization
GO:0030833 P regulation of actin filament polymerization
GO:0030837 P negative regulation of actin filament polymerization
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0040023 P nuclear migration
GO:0045177 C apical part of cell
GO:0048749 P compound eye development
GO:0050770 P regulation of axonogenesis
3273 O_BomoSK12947_5prime_partial:A_BomoSK_comp13140_c0_seq2
177bp
 hypothetical_protein_ASG42_23340_[Rhizobium_sp._Leaf391]
3274 O_BomoSK12948_complete:A_BomoSK_comp13140_c0_seq3
152bp
 PREDICTED:_protein_phosphatase_Slingshot_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003779 F actin binding
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006470 P protein dephosphorylation
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0010591 P regulation of lamellipodium assembly
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030036 P actin cytoskeleton organization
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0050770 P regulation of axonogenesis
3275 O_BomoSK12949_3prime_partial:A_BomoSK_comp13140_c0_seq4
809bp
 PREDICTED:_protein_phosphatase_Slingshot_[Bombyx_mori]
GO:0000188 P obsolete inactivation of MAPK activity
GO:0000278 P mitotic cell cycle
GO:0000902 P cell morphogenesis
GO:0003677 F DNA binding
GO:0003779 F actin binding
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006470 P protein dephosphorylation
GO:0007409 P axonogenesis
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0008330 F protein tyrosine/threonine phosphatase activity
GO:0010591 P regulation of lamellipodium assembly
GO:0016311 P dephosphorylation
GO:0016319 P mushroom body development
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0017017 F MAP kinase tyrosine/serine/threonine phosphatase activity
GO:0030036 P actin cytoskeleton organization
GO:0030833 P regulation of actin filament polymerization
GO:0030837 P negative regulation of actin filament polymerization
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0040023 P nuclear migration
GO:0045177 C apical part of cell
GO:0048749 P compound eye development
GO:0050770 P regulation of axonogenesis
3276 O_BomoSK1294_complete:A_BomoSK_comp4067_c0_seq2
104bp
 replication_protein_A_[Haladaptatus_paucihalophilus]
3277 O_BomoSK12950_5prime_partial:A_BomoSK_comp13140_c0_seq4
177bp
 hypothetical_protein_ASG42_23340_[Rhizobium_sp._Leaf391]
3278 O_BomoSK12951_3prime_partial:A_BomoSK_comp13140_c0_seq5
843bp
 PREDICTED:_protein_phosphatase_Slingshot_[Bombyx_mori]
GO:0000188 P obsolete inactivation of MAPK activity
GO:0000278 P mitotic cell cycle
GO:0000902 P cell morphogenesis
GO:0003677 F DNA binding
GO:0003779 F actin binding
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006470 P protein dephosphorylation
GO:0007409 P axonogenesis
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0008330 F protein tyrosine/threonine phosphatase activity
GO:0010591 P regulation of lamellipodium assembly
GO:0016311 P dephosphorylation
GO:0016319 P mushroom body development
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0017017 F MAP kinase tyrosine/serine/threonine phosphatase activity
GO:0030036 P actin cytoskeleton organization
GO:0030833 P regulation of actin filament polymerization
GO:0030837 P negative regulation of actin filament polymerization
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0040023 P nuclear migration
GO:0045177 C apical part of cell
GO:0048749 P compound eye development
GO:0050770 P regulation of axonogenesis
3279 O_BomoSK12952_5prime_partial:A_BomoSK_comp13140_c0_seq5
177bp
 hypothetical_protein_ASG42_23340_[Rhizobium_sp._Leaf391]
3280 O_BomoSK12953_complete:A_BomoSK_comp13141_c0_seq1
116bp
 PREDICTED:_uncharacterized_protein_LOC106129259_[Amyelois_transitella]
3281 O_BomoSK12954_internal:A_BomoSK_comp13142_c0_seq1
105bp
 PREDICTED:_uncharacterized_protein_LOC105841892,_partial_[Bombyx_mori]
3282 O_BomoSK12955_complete:A_BomoSK_comp13143_c1_seq1
1544bp
 DNA_topoisomerase_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003916 F DNA topoisomerase activity
GO:0003918 F DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006259 P DNA metabolic process
GO:0006265 P DNA topological change
GO:0016853 F isomerase activity
GO:0046872 F metal ion binding
3283 O_BomoSK12956_complete:A_BomoSK_comp13143_c1_seq1
262bp
 hypothetical_protein_RMCBS344292_17920_[Rhizopus_microsporus]
3284 O_BomoSK12957_complete:A_BomoSK_comp13143_c1_seq1
112bp
 hypothetical_protein_NY2A_b784R_[Paramecium_bursaria_Chlorella_virus_NY2A]
3285 O_BomoSK12958_complete:A_BomoSK_comp13143_c1_seq1
103bp
3286 O_BomoSK12959_5prime_partial:A_BomoSK_comp13144_c0_seq1
179bp
 PREDICTED:_acidic_fibroblast_growth_factor_intracellular-binding_protein_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007368 P determination of left/right symmetry
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0017134 F fibroblast growth factor binding
GO:0060026 P convergent extension
GO:0060271 P cilium assembly
GO:0070121 P Kupffer's vesicle development
3287 O_BomoSK1295_3prime_partial:A_BomoSK_comp4070_c0_seq1
812bp
 PREDICTED:_adhesive_plaque_matrix_protein_isoform_X2_[Papilio_xuthus]
GO:0002039 F p53 binding
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0006281 P DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006914 P autophagy
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010506 P regulation of autophagy
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030330 P DNA damage response, signal transduction by p53 class mediator
GO:0036459 F thiol-dependent deubiquitinase
GO:0044325 F transmembrane transporter binding
3288 O_BomoSK12960_complete:A_BomoSK_comp13144_c0_seq3
274bp
 acidic_fibroblast_growth_factor_intracellular_binding_protein_[Danaus_plexippus]
GO:0005634 C nucleus
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0017134 F fibroblast growth factor binding
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
3289 O_BomoSK12961_complete:A_BomoSK_comp13144_c0_seq4
358bp
 PREDICTED:_acidic_fibroblast_growth_factor_intracellular-binding_protein_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0017134 F fibroblast growth factor binding
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
3290 O_BomoSK12962_internal:A_BomoSK_comp13145_c0_seq1
458bp
 PREDICTED:_fibrillin-1-like_[Amyelois_transitella]
GO:0001527 C microfibril
GO:0005201 F extracellular matrix structural constituent
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0022617 P extracellular matrix disassembly
GO:0030023 F extracellular matrix constituent conferring elasticity
GO:0030198 P extracellular matrix organization
GO:0030326 P embryonic limb morphogenesis
GO:0030501 P positive regulation of bone mineralization
GO:0031012 C extracellular matrix
GO:0035108 P limb morphogenesis
GO:0035583 P sequestering of TGFbeta in extracellular matrix
GO:0043010 P camera-type eye development
GO:0045669 P positive regulation of osteoblast differentiation
GO:0048048 P embryonic eye morphogenesis
GO:0060346 P bone trabecula formation
GO:0090287 P regulation of cellular response to growth factor stimulus
3291 O_BomoSK12963_complete:A_BomoSK_comp13145_c0_seq1
242bp
3292 O_BomoSK12964_complete:A_BomoSK_comp13145_c0_seq1
126bp
3293 O_BomoSK12965_complete:A_BomoSK_comp13146_c0_seq1
201bp
 PREDICTED:_uncharacterized_protein_LOC106139004_[Amyelois_transitella]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000077 P DNA damage checkpoint signaling
GO:0000724 P double-strand break repair via homologous recombination
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016787 F hydrolase activity
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3294 O_BomoSK12966_complete:A_BomoSK_comp13146_c0_seq1
155bp
 thioredoxin_reductase_[Rhizobium_mesoamericanum]
3295 O_BomoSK12967_complete:A_BomoSK_comp13146_c0_seq2
473bp
 PREDICTED:_uncharacterized_protein_LOC106139004_[Amyelois_transitella]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000077 P DNA damage checkpoint signaling
GO:0000724 P double-strand break repair via homologous recombination
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016787 F hydrolase activity
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3296 O_BomoSK12968_complete:A_BomoSK_comp13146_c0_seq2
160bp
 thioredoxin_reductase_[Rhizobium_mesoamericanum]
3297 O_BomoSK12969_3prime_partial:A_BomoSK_comp13148_c0_seq1
325bp
 PREDICTED:_multiple_epidermal_growth_factor-like_domains_protein_11_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0006909 P phagocytosis
GO:0007155 P cell adhesion
GO:0007517 P muscle organ development
GO:0014719 P skeletal muscle satellite cell activation
GO:0014816 P skeletal muscle satellite cell differentiation
GO:0014841 P skeletal muscle satellite cell proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3298 O_BomoSK1296_complete:A_BomoSK_comp4070_c0_seq1
125bp
 glutamate-1-semialdehyde_2,1-aminomutase_[Sinorhizobium_fredii]
3299 O_BomoSK12970_5prime_partial:A_BomoSK_comp13148_c0_seq1
108bp
 putative_serine/threonine_protein_kinase_(fragment)_[Nocardia_cyriacigeorgica]
3300 O_BomoSK12971_3prime_partial:A_BomoSK_comp13148_c0_seq2
325bp
 PREDICTED:_multiple_epidermal_growth_factor-like_domains_protein_11_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0006909 P phagocytosis
GO:0007155 P cell adhesion
GO:0007517 P muscle organ development
GO:0014719 P skeletal muscle satellite cell activation
GO:0014816 P skeletal muscle satellite cell differentiation
GO:0014841 P skeletal muscle satellite cell proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
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