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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3001 O_BomoSK12701_complete:A_BomoSK_comp13042_c0_seq3
104bp
 60S_ribosomal_protein_L7a_[Fukomys_damarensis]
3002 O_BomoSK12702_3prime_partial:A_BomoSK_comp13042_c1_seq1
166bp
 PREDICTED:_uncharacterized_protein_LOC101745679_[Bombyx_mori]
3003 O_BomoSK12703_complete:A_BomoSK_comp13042_c1_seq1
130bp
 PREDICTED:_YLP_motif-containing_protein_1_isoform_X1_[Python_bivittatus]
3004 O_BomoSK12704_complete:A_BomoSK_comp13043_c0_seq1
853bp
 PREDICTED:_V-type_proton_ATPase_116_kDa_subunit_a_isoform_1_[Bombyx_mori]
GO:0000220 C vacuolar proton-transporting V-type ATPase, V0 domain
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007035 P vacuolar acidification
GO:0015078 F proton transmembrane transporter activity
GO:0015986 P ATP synthesis coupled proton transport
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016241 P regulation of macroautophagy
GO:0016471 C vacuolar proton-transporting V-type ATPase complex
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0033179 C proton-transporting V-type ATPase, V0 domain
GO:0042470 C melanosome
GO:0043231 C intracellular membrane-bounded organelle
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
GO:0051117 F ATPase binding
GO:0070062 C extracellular exosome
GO:0070072 P vacuolar proton-transporting V-type ATPase complex assembly
GO:1901998 P toxin transport
3005 O_BomoSK12705_complete:A_BomoSK_comp13043_c0_seq1
434bp
3006 O_BomoSK12706_complete:A_BomoSK_comp13043_c0_seq2
839bp
 PREDICTED:_V-type_proton_ATPase_116_kDa_subunit_a_isoform_1_[Bombyx_mori]
GO:0000220 C vacuolar proton-transporting V-type ATPase, V0 domain
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0033179 C proton-transporting V-type ATPase, V0 domain
GO:0042470 C melanosome
3007 O_BomoSK12707_complete:A_BomoSK_comp13043_c0_seq2
434bp
3008 O_BomoSK12708_complete:A_BomoSK_comp13045_c0_seq1
359bp
 PREDICTED:_RNA_3'-terminal_phosphate_cyclase_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003963 F RNA-3'-phosphate cyclase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006396 P RNA processing
GO:0016874 F ligase activity
GO:0044822 F RNA binding
3009 O_BomoSK12709_complete:A_BomoSK_comp13046_c0_seq1
1158bp
 Uncharacterized_protein_OBRU01_16526,_partial_[Operophtera_brumata]
3010 O_BomoSK1270_5prime_partial:A_BomoSK_comp4056_c0_seq1
502bp
 PREDICTED:_copper-transporting_ATPase_1_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001701 P in utero embryonic development
GO:0003674 F molecular_function
GO:0004008 F P-type divalent copper transporter activity
GO:0005375 F copper ion transmembrane transporter activity
GO:0005507 F copper ion binding
GO:0005524 F ATP binding
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006825 P copper ion transport
GO:0006878 P cellular copper ion homeostasis
GO:0007595 P lactation
GO:0008152 P metabolic process
GO:0010041 P response to iron(III) ion
GO:0010043 P response to zinc ion
GO:0015679 P plasma membrane copper ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016787 F hydrolase activity
GO:0019829 F ATPase-coupled cation transmembrane transporter activity
GO:0030001 P metal ion transport
GO:0030140 C trans-Golgi network transport vesicle
GO:0030141 C secretory granule
GO:0031526 C brush border membrane
GO:0032767 F copper-dependent protein binding
GO:0046688 P response to copper ion
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051353 P positive regulation of oxidoreductase activity
GO:0060003 P copper ion export
3011 O_BomoSK12710_internal:A_BomoSK_comp13047_c0_seq2
104bp
 cuticular_protein_hypothetical_10_precursor_[Bombyx_mori]
3012 O_BomoSK12711_internal:A_BomoSK_comp13047_c0_seq2
104bp
 hypothetical_protein_RR46_09343_[Papilio_xuthus]
3013 O_BomoSK12712_complete:A_BomoSK_comp13048_c0_seq1
408bp
 cytochrome_P450_monooxygenase_[Bombyx_mori]
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006697 P ecdysone biosynthetic process
GO:0007298 P border follicle cell migration
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0017143 P insecticide metabolic process
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0035302 F ecdysteroid 25-hydroxylase activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0045456 P ecdysteroid biosynthetic process
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0055114 P obsolete oxidation-reduction process
3014 O_BomoSK12713_complete:A_BomoSK_comp13048_c0_seq2
539bp
 cytochrome_P450_[Bombyx_mori]
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006697 P ecdysone biosynthetic process
GO:0007298 P border follicle cell migration
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0017143 P insecticide metabolic process
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0035302 F ecdysteroid 25-hydroxylase activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0045456 P ecdysteroid biosynthetic process
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0055114 P obsolete oxidation-reduction process
3015 O_BomoSK12714_complete:A_BomoSK_comp13049_c0_seq1
149bp
 serine_hydroxymethyltransferase_[Candidatus_Symbiothrix_dinenymphae]
3016 O_BomoSK12715_complete:A_BomoSK_comp13050_c0_seq1
137bp
 PREDICTED:_hairy/enhancer-of-split_related_with_YRPW_motif_protein_isoform_X6_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001967 P suckling behavior
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007417 P central nervous system development
GO:0009791 P post-embryonic development
GO:0010259 P multicellular organism aging
GO:0010467 P gene expression
GO:0021858 P GABAergic neuron differentiation in basal ganglia
GO:0030182 P neuron differentiation
GO:0035264 P multicellular organism growth
GO:0042803 F protein homodimerization activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
3017 O_BomoSK12716_complete:A_BomoSK_comp13050_c0_seq2
336bp
 PREDICTED:_hairy/enhancer-of-split_related_with_YRPW_motif_protein_isoform_X3_[Bombyx_mori]
3018 O_BomoSK12717_complete:A_BomoSK_comp13050_c0_seq3
442bp
 PREDICTED:_hairy/enhancer-of-split_related_with_YRPW_motif_protein_isoform_X6_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000983 F RNA polymerase II general transcription initiation factor activity
GO:0000988 F obsolete transcription factor activity, protein binding
GO:0001102 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001568 P blood vessel development
GO:0001570 P vasculogenesis
GO:0003150 P muscular septum morphogenesis
GO:0003151 P outflow tract morphogenesis
GO:0003171 P atrioventricular valve development
GO:0003184 P pulmonary valve morphogenesis
GO:0003186 P tricuspid valve morphogenesis
GO:0003195 P tricuspid valve formation
GO:0003199 P endocardial cushion to mesenchymal transition involved in heart valve formation
GO:0003208 P cardiac ventricle morphogenesis
GO:0003214 P cardiac left ventricle morphogenesis
GO:0003215 P cardiac right ventricle morphogenesis
GO:0003222 P ventricular trabecula myocardium morphogenesis
GO:0003300 P cardiac muscle hypertrophy
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007389 P pattern specification process
GO:0007507 P heart development
GO:0008134 F transcription factor binding
GO:0009948 P anterior/posterior axis specification
GO:0010460 P positive regulation of heart rate
GO:0010468 P regulation of gene expression
GO:0010629 P negative regulation of gene expression
GO:0010667 P negative regulation of cardiac muscle cell apoptotic process
GO:0014031 P mesenchymal cell development
GO:0014898 P cardiac muscle hypertrophy in response to stress
GO:0016580 C Sin3 complex
GO:0017053 C transcription repressor complex
GO:0035910 P ascending aorta morphogenesis
GO:0035912 P dorsal aorta morphogenesis
GO:0035939 F microsatellite binding
GO:0036304 P umbilical cord morphogenesis
GO:0042803 F protein homodimerization activity
GO:0042826 F histone deacetylase binding
GO:0043565 F sequence-specific DNA binding
GO:0045165 P cell fate commitment
GO:0045607 P regulation of inner ear auditory receptor cell differentiation
GO:0045746 P negative regulation of Notch signaling pathway
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0055015 P ventricular cardiac muscle cell development
GO:0060045 P positive regulation of cardiac muscle cell proliferation
GO:0060317 P cardiac epithelial to mesenchymal transition
GO:0060347 P heart trabecula formation
GO:0060411 P cardiac septum morphogenesis
GO:0060412 P ventricular septum morphogenesis
GO:0060413 P atrial septum morphogenesis
GO:0060633 P negative regulation of transcription initiation from RNA polymerase II promoter
GO:0060716 P labyrinthine layer blood vessel development
GO:0060840 P artery development
GO:0060842 P arterial endothelial cell differentiation
GO:0060948 P cardiac vascular smooth muscle cell development
GO:0060977 P coronary vasculature morphogenesis
GO:0061156 P pulmonary artery morphogenesis
GO:0061314 P Notch signaling involved in heart development
GO:0065004 P protein-DNA complex assembly
GO:0090102 P cochlea development
GO:0097084 P vascular associated smooth muscle cell development
GO:2000678 P negative regulation of transcription regulatory region DNA binding
GO:2000820 P negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation
GO:2001212 P regulation of vasculogenesis
3019 O_BomoSK12718_complete:A_BomoSK_comp13050_c0_seq3
155bp
 bifunctional_enoyl-CoA_hydratase/phosphate_acetyltransferase_[Comamonas_aquatica]
3020 O_BomoSK12719_complete:A_BomoSK_comp13052_c0_seq1
411bp
 PREDICTED:_endoplasmic_reticulum_resident_protein_44_[Papilio_machaon]
GO:0003756 F protein disulfide isomerase activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0005789 C endoplasmic reticulum membrane
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0006457 P protein folding
GO:0006986 P response to unfolded protein
GO:0009100 P glycoprotein metabolic process
GO:0009986 C cell surface
GO:0034976 P response to endoplasmic reticulum stress
GO:0045454 P cell redox homeostasis
GO:0070062 C extracellular exosome
3021 O_BomoSK1271_5prime_partial:A_BomoSK_comp4056_c0_seq1
155bp
 hypothetical_protein_TERG_05322_[Trichophyton_rubrum_CBS_118892]
3022 O_BomoSK12720_3prime_partial:A_BomoSK_comp13055_c0_seq1
327bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_probable_ATP-dependent_RNA_helicase_DHX35_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
3023 O_BomoSK12721_complete:A_BomoSK_comp13058_c0_seq1
1557bp
 PREDICTED:_uncharacterized_protein_LOC106135505_[Amyelois_transitella]
GO:0005125 F cytokine activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006935 P chemotaxis
3024 O_BomoSK12722_complete:A_BomoSK_comp13058_c0_seq1
109bp
3025 O_BomoSK12723_complete:A_BomoSK_comp13059_c0_seq1
342bp
 PREDICTED:_glycosyltransferase_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0008378 F galactosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
3026 O_BomoSK12724_complete:A_BomoSK_comp13059_c2_seq1
141bp
 hypothetical_protein_RR46_03187_[Papilio_xuthus]
3027 O_BomoSK12725_complete:A_BomoSK_comp13060_c0_seq1
687bp
 PREDICTED:_sperm_motility_kinase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
3028 O_BomoSK12726_complete:A_BomoSK_comp13060_c0_seq1
116bp
 PREDICTED:_ATP-binding_cassette_sub-family_A_member_12_[Capra_hircus]
3029 O_BomoSK12727_complete:A_BomoSK_comp13060_c0_seq2
687bp
 PREDICTED:_sperm_motility_kinase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
3030 O_BomoSK12728_complete:A_BomoSK_comp13060_c0_seq2
116bp
 PREDICTED:_ATP-binding_cassette_sub-family_A_member_12_[Capra_hircus]
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