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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2971 O_BomoSK12675_complete:A_BomoSK_comp13032_c0_seq1
136bp
 hypothetical_protein_M413DRAFT_28883_[Hebeloma_cylindrosporum_h7]
2972 O_BomoSK12676_complete:A_BomoSK_comp13032_c0_seq1
109bp
 methionine_gamma-lyase_[[Clostridium]_mangenotii]
2973 O_BomoSK12677_complete:A_BomoSK_comp13032_c0_seq1
103bp
2974 O_BomoSK12678_complete:A_BomoSK_comp13032_c0_seq1
101bp
 MULTISPECIES:_magnesium_transporter_[Pseudomonas]
2975 O_BomoSK12679_3prime_partial:A_BomoSK_comp13032_c0_seq2
760bp
 PREDICTED:_uncharacterized_protein_LOC101744850_isoform_X2_[Bombyx_mori]
2976 O_BomoSK1267_complete:A_BomoSK_comp4052_c0_seq1
101bp
 phosphoadenosine_phosphosulfate_reductase_[Lactobacillus_salivarius]
2977 O_BomoSK12680_complete:A_BomoSK_comp13032_c0_seq2
136bp
 hypothetical_protein_M413DRAFT_28883_[Hebeloma_cylindrosporum_h7]
2978 O_BomoSK12681_complete:A_BomoSK_comp13032_c0_seq2
109bp
 methionine_gamma-lyase_[[Clostridium]_mangenotii]
2979 O_BomoSK12682_complete:A_BomoSK_comp13033_c0_seq2
373bp
 PREDICTED:_leucine-rich_repeat_protein_SHOC-2_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
2980 O_BomoSK12683_complete:A_BomoSK_comp13033_c0_seq4
367bp
 PREDICTED:_leucine-rich_repeat_protein_SHOC-2_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
2981 O_BomoSK12684_5prime_partial:A_BomoSK_comp13034_c1_seq2
292bp
 PREDICTED:_serine/threonine-protein_phosphatase_4_catalytic_subunit_[Papilio_polytes]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006470 P protein dephosphorylation
GO:0008152 P metabolic process
GO:0010569 P regulation of double-strand break repair via homologous recombination
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
2982 O_BomoSK12685_complete:A_BomoSK_comp13035_c0_seq2
167bp
 hypothetical_protein_AC249_AIPGENE15162_[Exaiptasia_pallida]
2983 O_BomoSK12686_complete:A_BomoSK_comp13035_c0_seq2
118bp
 predicted_protein_[Physcomitrella_patens]
2984 O_BomoSK12687_complete:A_BomoSK_comp13035_c0_seq4
158bp
 hypothetical_protein_RP20_CCG009760_[Aedes_albopictus]
2985 O_BomoSK12688_complete:A_BomoSK_comp13036_c0_seq1
277bp
 hypothetical_protein_KGM_08620_[Danaus_plexippus]
GO:0001223 F transcription coactivator binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0008134 F transcription factor binding
GO:0008285 P negative regulation of cell population proliferation
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
2986 O_BomoSK12689_complete:A_BomoSK_comp13037_c0_seq1
173bp
 PREDICTED:_BTB/POZ_domain-containing_protein_KCTD1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0051260 P protein homooligomerization
2987 O_BomoSK1268_3prime_partial:A_BomoSK_comp4054_c0_seq1
151bp
 PREDICTED:_uncharacterized_protein_LOC101743204_[Bombyx_mori]
2988 O_BomoSK12690_complete:A_BomoSK_comp13038_c0_seq1
319bp
 putative_RDH13_[Operophtera_brumata]
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0009644 P response to high light intensity
GO:0010842 P retina layer formation
GO:0016491 F oxidoreductase activity
GO:0042462 P eye photoreceptor cell development
GO:0055114 P obsolete oxidation-reduction process
2989 O_BomoSK12691_complete:A_BomoSK_comp13040_c0_seq1
493bp
 PREDICTED:_adenylosuccinate_lyase_[Papilio_machaon]
GO:0003824 F catalytic activity
GO:0004018 F N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
GO:0006164 P purine nucleotide biosynthetic process
GO:0006189 P 'de novo' IMP biosynthetic process
GO:0009152 P purine ribonucleotide biosynthetic process
GO:0016829 F lyase activity
GO:0044208 P 'de novo' AMP biosynthetic process
GO:0070626 F (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity
2990 O_BomoSK12692_complete:A_BomoSK_comp13041_c0_seq1
208bp
 Protein_GDAP2-like_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
2991 O_BomoSK12693_complete:A_BomoSK_comp13041_c0_seq2
208bp
 Protein_GDAP2-like_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
2992 O_BomoSK12694_complete:A_BomoSK_comp13041_c0_seq3
208bp
 Protein_GDAP2-like_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
2993 O_BomoSK12695_5prime_partial:A_BomoSK_comp13041_c0_seq4
250bp
 PREDICTED:_protein_GDAP2_homolog,_partial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
2994 O_BomoSK12696_internal:A_BomoSK_comp13042_c0_seq1
1087bp
 PREDICTED:_uncharacterized_protein_LOC101745679_[Bombyx_mori]
2995 O_BomoSK12697_5prime_partial:A_BomoSK_comp13042_c0_seq1
172bp
 acyl-CoA_synthetase_[Bradyrhizobium_sp._CCBAU_15635]
2996 O_BomoSK12698_complete:A_BomoSK_comp13042_c0_seq1
104bp
 60S_ribosomal_protein_L7a_[Fukomys_damarensis]
2997 O_BomoSK12699_internal:A_BomoSK_comp13042_c0_seq3
1104bp
 PREDICTED:_uncharacterized_protein_LOC101745679_[Bombyx_mori]
2998 O_BomoSK1269_5prime_partial:A_BomoSK_comp4054_c0_seq1
116bp
2999 O_BomoSK126_internal:A_BomoSK_comp410_c1_seq1
159bp
 HUNB_BOMMO_RecName:_Full=Protein_hunchback
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0035282 P segmentation
GO:0040034 P regulation of development, heterochronic
GO:0046872 F metal ion binding
3000 O_BomoSK12700_5prime_partial:A_BomoSK_comp13042_c0_seq3
172bp
 acyl-CoA_synthetase_[Bradyrhizobium_sp._CCBAU_15635]
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