Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
3031	O_BomoSK12729_complete:A_BomoSK_comp13060_c0_seq3 644bp	Bomo_Chr11	PREDICTED:_sperm_motility_kinase_isoform_X2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005524 F ATP binding GO:0005575 C cellular_component GO:0005737 C cytoplasm GO:0006468 P protein phosphorylation GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity
3032	O_BomoSK1272_complete:A_BomoSK_comp4056_c0_seq1 140bp	Bomo_Chr23
3033	O_BomoSK12730_complete:A_BomoSK_comp13060_c0_seq3 116bp	Bomo_Chr11	PREDICTED:_ATP-binding_cassette_sub-family_A_member_12_[Capra_hircus]
3034	O_BomoSK12731_complete:A_BomoSK_comp13060_c0_seq4 644bp	Bomo_Chr11	PREDICTED:_sperm_motility_kinase_isoform_X2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005524 F ATP binding GO:0005575 C cellular_component GO:0005737 C cytoplasm GO:0006468 P protein phosphorylation GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity
3035	O_BomoSK12732_complete:A_BomoSK_comp13060_c0_seq4 116bp	Bomo_Chr11	PREDICTED:_ATP-binding_cassette_sub-family_A_member_12_[Capra_hircus]
3036	O_BomoSK12733_complete:A_BomoSK_comp13061_c0_seq1 579bp	Bomo_Chr19	PREDICTED:_collagen_type_IV_alpha-3-binding_protein_[Papilio_xuthus]	GO:0005737 C cytoplasm GO:0005783 C endoplasmic reticulum GO:0005794 C Golgi apparatus GO:0005829 C cytosol GO:0006810 P transport GO:0006869 P lipid transport GO:0008289 F lipid binding GO:0035621 P ER to Golgi ceramide transport GO:0070273 F phosphatidylinositol-4-phosphate binding
3037	O_BomoSK12734_complete:A_BomoSK_comp13061_c0_seq1 134bp	Bomo_Chr19	DNA_polymerase_I_[Bifidobacterium_asteroides]
3038	O_BomoSK12735_complete:A_BomoSK_comp13061_c0_seq1 119bp	Bomo_Chr19	PREDICTED:_ER_membrane_protein_complex_subunit_2-like_[Brassica_napus]
3039	O_BomoSK12736_complete:A_BomoSK_comp13061_c0_seq1 109bp	Bomo_Chr19	hypothetical_protein_[Streptomyces_sp._NRRL_S-15]
3040	O_BomoSK12737_complete:A_BomoSK_comp13061_c0_seq2 293bp	Bomo_Chr19	PREDICTED:_collagen_type_IV_alpha-3-binding_protein-like_[Amyelois_transitella]	GO:0005737 C cytoplasm GO:0005783 C endoplasmic reticulum GO:0005794 C Golgi apparatus GO:0006810 P transport GO:0006869 P lipid transport GO:0007275 P multicellular organism development GO:0007517 P muscle organ development GO:0008289 F lipid binding GO:0035620 F ceramide transfer activity GO:0035621 P ER to Golgi ceramide transport GO:0097001 F ceramide binding
3041	O_BomoSK12738_complete:A_BomoSK_comp13061_c0_seq2 128bp	Bomo_Chr19	DNA_polymerase_I_[Bifidobacterium_asteroides]
3042	O_BomoSK12739_complete:A_BomoSK_comp13061_c0_seq2 109bp	Bomo_Chr19	hypothetical_protein_[Streptomyces_sp._NRRL_S-15]
3043	O_BomoSK1273_3prime_partial:A_BomoSK_comp4056_c0_seq1 131bp	Bomo_Chr23	hypothetical_protein_ACD_37C00066G0001_[uncultured_bacterium]
3044	O_BomoSK12740_complete:A_BomoSK_comp13061_c0_seq2 104bp	Bomo_Chr19
3045	O_BomoSK12741_complete:A_BomoSK_comp13061_c0_seq3 553bp	Bomo_Chr19	PREDICTED:_collagen_type_IV_alpha-3-binding_protein_[Papilio_xuthus]	GO:0005737 C cytoplasm GO:0005783 C endoplasmic reticulum GO:0005794 C Golgi apparatus GO:0005829 C cytosol GO:0006810 P transport GO:0006869 P lipid transport GO:0008289 F lipid binding GO:0035621 P ER to Golgi ceramide transport GO:0070273 F phosphatidylinositol-4-phosphate binding
3046	O_BomoSK12742_complete:A_BomoSK_comp13061_c0_seq3 134bp	Bomo_Chr19	DNA_polymerase_I_[Bifidobacterium_asteroides]
3047	O_BomoSK12743_complete:A_BomoSK_comp13061_c0_seq3 119bp	Bomo_Chr19	PREDICTED:_ER_membrane_protein_complex_subunit_2-like_[Brassica_napus]
3048	O_BomoSK12744_complete:A_BomoSK_comp13061_c0_seq3 109bp	Bomo_Chr19	hypothetical_protein_[Streptomyces_sp._NRRL_S-15]
3049	O_BomoSK12745_complete:A_BomoSK_comp13063_c0_seq1 111bp	Bomo_Chr22	PREDICTED:_protein_FAM32A-like_[Amyelois_transitella]	GO:0005634 C nucleus GO:0005730 C nucleolus GO:0006915 P apoptotic process GO:0007049 P cell cycle
3050	O_BomoSK12746_complete:A_BomoSK_comp13064_c0_seq1 806bp	Bomo_Chr13	PREDICTED:_TBC_domain-containing_protein_kinase-like_protein_[Amyelois_transitella]	GO:0004672 F protein kinase activity GO:0005096 F GTPase activator activity GO:0005524 F ATP binding GO:0005622 C intracellular anatomical structure GO:0006468 P protein phosphorylation GO:0006886 P intracellular protein transport GO:0012505 C endomembrane system GO:0017137 F small GTPase binding GO:0031338 P regulation of vesicle fusion GO:0090630 P activation of GTPase activity
3051	O_BomoSK12747_complete:A_BomoSK_comp13065_c0_seq1 218bp	Bomo_Chr11	hypothetical_protein_KGM_14745_[Danaus_plexippus]	GO:0000790 C chromatin GO:0001056 F RNA polymerase III activity GO:0002376 P immune system process GO:0005634 C nucleus GO:0005666 C RNA polymerase III complex GO:0006351 P transcription, DNA-templated GO:0006359 P regulation of transcription by RNA polymerase III GO:0006384 P transcription initiation from RNA polymerase III promoter GO:0008283 P cell population proliferation GO:0032728 P positive regulation of interferon-beta production GO:0045087 P innate immune response GO:0045089 P positive regulation of innate immune response GO:0051607 P defense response to virus
3052	O_BomoSK12748_complete:A_BomoSK_comp13067_c0_seq1 227bp	Bomo_Chr24	PREDICTED:_pleckstrin_homology-like_domain_family_B_member_1_[Bombyx_mori]	GO:0000226 P microtubule cytoskeleton organization GO:0003674 F molecular_function GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0005925 C focal adhesion GO:0010470 P regulation of gastrulation GO:0010717 P regulation of epithelial to mesenchymal transition GO:0016020 C membrane GO:0031252 C cell leading edge GO:0045111 C intermediate filament cytoskeleton GO:0045180 C basal cortex GO:0045184 P establishment of protein localization GO:0051497 P negative regulation of stress fiber assembly GO:0051895 P negative regulation of focal adhesion assembly GO:0070507 P regulation of microtubule cytoskeleton organization GO:1903690 P negative regulation of wound healing, spreading of epidermal cells GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
3053	O_BomoSK12749_complete:A_BomoSK_comp13067_c0_seq2 225bp	Bomo_Chr24	PREDICTED:_pleckstrin_homology-like_domain_family_B_member_1_[Papilio_polytes]	GO:0000226 P microtubule cytoskeleton organization GO:0003674 F molecular_function GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0005925 C focal adhesion GO:0010470 P regulation of gastrulation GO:0010717 P regulation of epithelial to mesenchymal transition GO:0016020 C membrane GO:0031252 C cell leading edge GO:0045111 C intermediate filament cytoskeleton GO:0045180 C basal cortex GO:0045184 P establishment of protein localization GO:0051497 P negative regulation of stress fiber assembly GO:0051895 P negative regulation of focal adhesion assembly GO:0070507 P regulation of microtubule cytoskeleton organization GO:1903690 P negative regulation of wound healing, spreading of epidermal cells GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
3054	O_BomoSK1274_5prime_partial:A_BomoSK_comp4056_c0_seq3 502bp	Bomo_Chr23	PREDICTED:_copper-transporting_ATPase_1_isoform_X2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0001701 P in utero embryonic development GO:0003674 F molecular_function GO:0004008 F P-type divalent copper transporter activity GO:0005375 F copper ion transmembrane transporter activity GO:0005507 F copper ion binding GO:0005524 F ATP binding GO:0005770 C late endosome GO:0005794 C Golgi apparatus GO:0005802 C trans-Golgi network GO:0005886 C plasma membrane GO:0005887 C integral component of plasma membrane GO:0006810 P transport GO:0006811 P ion transport GO:0006812 P cation transport GO:0006825 P copper ion transport GO:0006878 P cellular copper ion homeostasis GO:0007595 P lactation GO:0008152 P metabolic process GO:0010041 P response to iron(III) ion GO:0010043 P response to zinc ion GO:0015679 P plasma membrane copper ion transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016323 C basolateral plasma membrane GO:0016787 F hydrolase activity GO:0019829 F ATPase-coupled cation transmembrane transporter activity GO:0030001 P metal ion transport GO:0030140 C trans-Golgi network transport vesicle GO:0030141 C secretory granule GO:0031526 C brush border membrane GO:0032767 F copper-dependent protein binding GO:0046688 P response to copper ion GO:0046872 F metal ion binding GO:0048471 C perinuclear region of cytoplasm GO:0051353 P positive regulation of oxidoreductase activity GO:0060003 P copper ion export
3055	O_BomoSK12750_complete:A_BomoSK_comp13067_c0_seq3 225bp	Bomo_Chr24	PREDICTED:_pleckstrin_homology-like_domain_family_B_member_1_[Papilio_polytes]	GO:0000226 P microtubule cytoskeleton organization GO:0003674 F molecular_function GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0005925 C focal adhesion GO:0010470 P regulation of gastrulation GO:0010717 P regulation of epithelial to mesenchymal transition GO:0016020 C membrane GO:0031252 C cell leading edge GO:0045111 C intermediate filament cytoskeleton GO:0045180 C basal cortex GO:0045184 P establishment of protein localization GO:0051497 P negative regulation of stress fiber assembly GO:0051895 P negative regulation of focal adhesion assembly GO:0070507 P regulation of microtubule cytoskeleton organization GO:1903690 P negative regulation of wound healing, spreading of epidermal cells GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
3056	O_BomoSK12751_complete:A_BomoSK_comp13067_c0_seq3 114bp	Bomo_Chr24	extensin_[Methanolinea_sp._SDB]
3057	O_BomoSK12752_5prime_partial:A_BomoSK_comp13067_c0_seq4 236bp	Bomo_Chr24	PREDICTED:_pleckstrin_homology-like_domain_family_B_member_1_[Bombyx_mori]	GO:0000226 P microtubule cytoskeleton organization GO:0003674 F molecular_function GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0005925 C focal adhesion GO:0010470 P regulation of gastrulation GO:0010717 P regulation of epithelial to mesenchymal transition GO:0016020 C membrane GO:0031252 C cell leading edge GO:0045111 C intermediate filament cytoskeleton GO:0045180 C basal cortex GO:0045184 P establishment of protein localization GO:0051497 P negative regulation of stress fiber assembly GO:0051895 P negative regulation of focal adhesion assembly GO:0070507 P regulation of microtubule cytoskeleton organization GO:1903690 P negative regulation of wound healing, spreading of epidermal cells GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
3058	O_BomoSK12753_5prime_partial:A_BomoSK_comp13067_c0_seq4 123bp	Bomo_Chr24	Pleckstrin_[Operophtera_brumata]
3059	O_BomoSK12754_complete:A_BomoSK_comp13067_c0_seq5 227bp	Bomo_Chr24	PREDICTED:_pleckstrin_homology-like_domain_family_B_member_1_[Bombyx_mori]	GO:0000226 P microtubule cytoskeleton organization GO:0003674 F molecular_function GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0005925 C focal adhesion GO:0010470 P regulation of gastrulation GO:0010717 P regulation of epithelial to mesenchymal transition GO:0016020 C membrane GO:0031252 C cell leading edge GO:0045111 C intermediate filament cytoskeleton GO:0045180 C basal cortex GO:0045184 P establishment of protein localization GO:0051497 P negative regulation of stress fiber assembly GO:0051895 P negative regulation of focal adhesion assembly GO:0070507 P regulation of microtubule cytoskeleton organization GO:1903690 P negative regulation of wound healing, spreading of epidermal cells GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
3060	O_BomoSK12755_complete:A_BomoSK_comp13067_c0_seq6 225bp	Bomo_Chr24	PREDICTED:_pleckstrin_homology-like_domain_family_B_member_1_[Papilio_polytes]	GO:0000226 P microtubule cytoskeleton organization GO:0003674 F molecular_function GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0005925 C focal adhesion GO:0010470 P regulation of gastrulation GO:0010717 P regulation of epithelial to mesenchymal transition GO:0016020 C membrane GO:0031252 C cell leading edge GO:0045111 C intermediate filament cytoskeleton GO:0045180 C basal cortex GO:0045184 P establishment of protein localization GO:0051497 P negative regulation of stress fiber assembly GO:0051895 P negative regulation of focal adhesion assembly GO:0070507 P regulation of microtubule cytoskeleton organization GO:1903690 P negative regulation of wound healing, spreading of epidermal cells GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis