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Search ORF from Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

2341

O_BomoSK12107_complete:A_BomoSK_comp12846_c0_seq1

177bp

Bomo_Chr1

transporter,_major_facilitator_family_protein_[Ancylostoma_ceylanicum]

2342

O_BomoSK12108_5prime_partial:A_BomoSK_comp12846_c0_seq2

310bp

Bomo_Chr1

surfeit_1_isoform_1_[Bombyx_mori]

GO:0003674	F	molecular_function
GO:0004129	F	cytochrome-c oxidase activity
GO:0005575	C	cellular_component
GO:0005739	C	mitochondrion
GO:0005743	C	mitochondrial inner membrane
GO:0006119	P	oxidative phosphorylation
GO:0006754	P	ATP biosynthetic process
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:1902600	P	proton transmembrane transport

2343

O_BomoSK12109_complete:A_BomoSK_comp12846_c0_seq2

177bp

Bomo_Chr1

transporter,_major_facilitator_family_protein_[Ancylostoma_ceylanicum]

2344

O_BomoSK1210_complete:A_BomoSK_comp3994_c0_seq1

126bp

Bomo_Chr24

hypothetical_protein_[Chondromyces_apiculatus]

2345

O_BomoSK12110_5prime_partial:A_BomoSK_comp12846_c0_seq3

186bp

Bomo_Chr1

surfeit_1_isoform_1_[Bombyx_mori]

GO:0002168	P	instar larval development
GO:0005739	C	mitochondrion
GO:0005743	C	mitochondrial inner membrane
GO:0007632	P	visual behavior
GO:0008535	P	respiratory chain complex IV assembly
GO:0009060	P	aerobic respiration
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0022008	P	neurogenesis
GO:0033617	P	mitochondrial cytochrome c oxidase assembly
GO:0042331	P	phototaxis

2346

O_BomoSK12111_complete:A_BomoSK_comp12846_c0_seq3

140bp

Bomo_Chr1

nitric_oxide_dioxygenase_[Agrobacterium_albertimagni_AOL15]

2347

O_BomoSK12112_5prime_partial:A_BomoSK_comp12846_c0_seq4

186bp

Bomo_Chr1

surfeit_1_isoform_1_[Bombyx_mori]

GO:0002168	P	instar larval development
GO:0005739	C	mitochondrion
GO:0005743	C	mitochondrial inner membrane
GO:0007632	P	visual behavior
GO:0008535	P	respiratory chain complex IV assembly
GO:0009060	P	aerobic respiration
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0022008	P	neurogenesis
GO:0033617	P	mitochondrial cytochrome c oxidase assembly
GO:0042331	P	phototaxis

2348

O_BomoSK12113_complete:A_BomoSK_comp12846_c0_seq4

140bp

Bomo_Chr1

nitric_oxide_dioxygenase_[Agrobacterium_albertimagni_AOL15]

2349

O_BomoSK12114_complete:A_BomoSK_comp12847_c0_seq1

162bp

Bomo_Chr17

PREDICTED:_leucine-rich_repeat_protein_soc-2_homolog_[Amyelois_transitella]

GO:0002224	P	toll-like receptor signaling pathway
GO:0002376	P	immune system process
GO:0002755	P	MyD88-dependent toll-like receptor signaling pathway
GO:0004872	F	signaling receptor activity
GO:0004888	F	transmembrane signaling receptor activity
GO:0005515	F	protein binding
GO:0005794	C	Golgi apparatus
GO:0005886	C	plasma membrane
GO:0005887	C	integral component of plasma membrane
GO:0006954	P	inflammatory response
GO:0006955	P	immune response
GO:0007165	P	signal transduction
GO:0007250	P	activation of NF-kappaB-inducing kinase activity
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0030670	C	phagocytic vesicle membrane
GO:0031410	C	cytoplasmic vesicle
GO:0034150	P	toll-like receptor 6 signaling pathway
GO:0035355	C	Toll-like receptor 2-Toll-like receptor 6 protein complex
GO:0035663	F	Toll-like receptor 2 binding
GO:0038124	P	toll-like receptor TLR6:TLR2 signaling pathway
GO:0042088	P	T-helper 1 type immune response
GO:0042496	P	detection of diacyl bacterial lipopeptide
GO:0042742	P	defense response to bacterium
GO:0043123	P	positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043507	P	positive regulation of JUN kinase activity
GO:0045087	P	innate immune response
GO:0045121	C	membrane raft
GO:0045410	P	positive regulation of interleukin-6 production
GO:0050702	P	interleukin-1 beta production
GO:0050707	P	regulation of cytokine production
GO:0071723	F	lipopeptide binding
GO:0071726	P	cellular response to diacyl bacterial lipopeptide
GO:1900227	P	positive regulation of NLRP3 inflammasome complex assembly

2350

O_BomoSK12115_complete:A_BomoSK_comp12847_c0_seq2

470bp

Bomo_Chr17

PREDICTED:_leucine-rich_repeat_protein_soc-2_homolog_[Amyelois_transitella]

GO:0000164	C	protein phosphatase type 1 complex
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0019903	F	protein phosphatase binding
GO:0046579	P	positive regulation of Ras protein signal transduction

2351

O_BomoSK12116_5prime_partial:A_BomoSK_comp12848_c0_seq1

280bp

Bomo_Chr9

PREDICTED:_uncharacterized_protein_LOC101744958_isoform_X2_[Bombyx_mori]

2352

O_BomoSK12117_complete:A_BomoSK_comp12849_c0_seq1

147bp

Bomo_Chr12

uncharacterized_protein_LOC106123913_[Papilio_xuthus]

GO:0000166	F	nucleotide binding
GO:0000398	P	mRNA splicing, via spliceosome
GO:0003676	F	nucleic acid binding
GO:0003723	F	RNA binding
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005737	C	cytoplasm
GO:0006369	P	termination of RNA polymerase II transcription
GO:0006397	P	mRNA processing
GO:0006405	P	RNA export from nucleus
GO:0006406	P	mRNA export from nucleus
GO:0006810	P	transport
GO:0008270	F	zinc ion binding
GO:0008380	P	RNA splicing
GO:0031124	P	mRNA 3'-end processing
GO:0044822	F	RNA binding
GO:0046872	F	metal ion binding
GO:0048025	P	negative regulation of mRNA splicing, via spliceosome
GO:0051028	P	mRNA transport
GO:0070062	C	extracellular exosome

2353

O_BomoSK12118_complete:A_BomoSK_comp12849_c0_seq1

106bp

Bomo_Chr12

hypothetical_protein_PISMIDRAFT_85347,_partial_[Pisolithus_microcarpus_441]

2354

O_BomoSK12119_complete:A_BomoSK_comp12849_c0_seq2

147bp

Bomo_Chr12

uncharacterized_protein_LOC106123913_[Papilio_xuthus]

GO:0000166	F	nucleotide binding
GO:0000398	P	mRNA splicing, via spliceosome
GO:0003676	F	nucleic acid binding
GO:0003723	F	RNA binding
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005737	C	cytoplasm
GO:0006369	P	termination of RNA polymerase II transcription
GO:0006397	P	mRNA processing
GO:0006405	P	RNA export from nucleus
GO:0006406	P	mRNA export from nucleus
GO:0006810	P	transport
GO:0008270	F	zinc ion binding
GO:0008380	P	RNA splicing
GO:0031124	P	mRNA 3'-end processing
GO:0044822	F	RNA binding
GO:0046872	F	metal ion binding
GO:0048025	P	negative regulation of mRNA splicing, via spliceosome
GO:0051028	P	mRNA transport
GO:0070062	C	extracellular exosome

2355

O_BomoSK1211_complete:A_BomoSK_comp3994_c0_seq1

106bp

Bomo_Chr24

hypothetical_protein_PGUG_00732_[Meyerozyma_guilliermondii_ATCC_6260]

2356

O_BomoSK12120_complete:A_BomoSK_comp12849_c0_seq2

106bp

Bomo_Chr12

hypothetical_protein_PISMIDRAFT_85347,_partial_[Pisolithus_microcarpus_441]

2357

O_BomoSK12121_complete:A_BomoSK_comp12849_c0_seq3

125bp

Bomo_Chr12

arginine/serine-rich_splicing_factor_7_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0003676	F	nucleic acid binding
GO:0003723	F	RNA binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005737	C	cytoplasm
GO:0006397	P	mRNA processing
GO:0006810	P	transport
GO:0008270	F	zinc ion binding
GO:0008380	P	RNA splicing
GO:0044822	F	RNA binding
GO:0046872	F	metal ion binding
GO:0048025	P	negative regulation of mRNA splicing, via spliceosome
GO:0051028	P	mRNA transport
GO:0070062	C	extracellular exosome

2358

O_BomoSK12122_complete:A_BomoSK_comp12849_c0_seq4

177bp

Bomo_Chr12

arginine/serine-rich_splicing_factor_7_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0000398	P	mRNA splicing, via spliceosome
GO:0003676	F	nucleic acid binding
GO:0003723	F	RNA binding
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005737	C	cytoplasm
GO:0006369	P	termination of RNA polymerase II transcription
GO:0006397	P	mRNA processing
GO:0006405	P	RNA export from nucleus
GO:0006406	P	mRNA export from nucleus
GO:0006810	P	transport
GO:0008270	F	zinc ion binding
GO:0008380	P	RNA splicing
GO:0031124	P	mRNA 3'-end processing
GO:0044822	F	RNA binding
GO:0046872	F	metal ion binding
GO:0048025	P	negative regulation of mRNA splicing, via spliceosome
GO:0051028	P	mRNA transport
GO:0070062	C	extracellular exosome

2359

O_BomoSK12123_complete:A_BomoSK_comp12849_c0_seq4

104bp

Bomo_Chr12

cell_surface_protein_[Prevotella_sp._oral_taxon_472]

2360

O_BomoSK12124_complete:A_BomoSK_comp12849_c0_seq5

125bp

Bomo_Chr12

arginine/serine-rich_splicing_factor_7_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0003676	F	nucleic acid binding
GO:0003723	F	RNA binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005737	C	cytoplasm
GO:0006397	P	mRNA processing
GO:0006810	P	transport
GO:0008270	F	zinc ion binding
GO:0008380	P	RNA splicing
GO:0044822	F	RNA binding
GO:0046872	F	metal ion binding
GO:0048025	P	negative regulation of mRNA splicing, via spliceosome
GO:0051028	P	mRNA transport
GO:0070062	C	extracellular exosome

2361

O_BomoSK12125_complete:A_BomoSK_comp12850_c0_seq1

370bp

Bomo_Chr15

PREDICTED:_uncharacterized_protein_C6orf136_homolog_[Bombyx_mori]

2362

O_BomoSK12126_complete:A_BomoSK_comp12852_c0_seq1

1014bp

Bomo_Chr4

PREDICTED:_peptidyl-prolyl_cis-trans_isomerase_G-like_isoform_X3_[Bombyx_mori]

GO:0005575	C	cellular_component
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0008150	P	biological_process
GO:0016607	C	nuclear speck
GO:0044822	F	RNA binding
GO:0046872	F	metal ion binding

2363

O_BomoSK12127_complete:A_BomoSK_comp12852_c0_seq1

172bp

Bomo_Chr4

unnamed_protein_product_[Coffea_canephora]

2364

O_BomoSK12128_complete:A_BomoSK_comp12852_c0_seq1

142bp

Bomo_Chr4

hypothetical_protein_[Flexibacter_roseolus]

2365

O_BomoSK12129_complete:A_BomoSK_comp12854_c0_seq1

361bp

Bomo_Chr18

PREDICTED:_uncharacterized_protein_LOC106711973_isoform_X1_[Papilio_machaon]

2366

O_BomoSK1212_3prime_partial:A_BomoSK_comp3998_c0_seq1

788bp

Bomo_Chr15

PREDICTED:_dynamin_isoform_X1_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0000281	P	mitotic cytokinesis
GO:0001661	P	conditioned taste aversion
GO:0001738	P	morphogenesis of a polarized epithelium
GO:0003777	F	microtubule motor activity
GO:0003779	F	actin binding
GO:0003924	F	GTPase activity
GO:0005525	F	GTP binding
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0005856	C	cytoskeleton
GO:0005874	C	microtubule
GO:0005886	C	plasma membrane
GO:0006897	P	endocytosis
GO:0006898	P	receptor-mediated endocytosis
GO:0007017	P	microtubule-based process
GO:0007291	P	sperm individualization
GO:0007293	P	germarium-derived egg chamber formation
GO:0007298	P	border follicle cell migration
GO:0007349	P	cellularization
GO:0007424	P	open tracheal system development
GO:0007427	P	epithelial cell migration, open tracheal system
GO:0007435	P	salivary gland morphogenesis
GO:0007612	P	learning
GO:0007613	P	memory
GO:0007614	P	short-term memory
GO:0007637	P	proboscis extension reflex
GO:0008017	F	microtubule binding
GO:0008152	P	metabolic process
GO:0008355	P	olfactory learning
GO:0009408	P	response to heat
GO:0016185	P	synaptic vesicle budding from presynaptic endocytic zone membrane
GO:0016192	P	vesicle-mediated transport
GO:0016787	F	hydrolase activity
GO:0030198	P	extracellular matrix organization
GO:0030536	P	larval feeding behavior
GO:0030707	P	ovarian follicle cell development
GO:0030866	P	cortical actin cytoskeleton organization
GO:0032956	P	regulation of actin cytoskeleton organization
GO:0032970	P	regulation of actin filament-based process
GO:0034334	P	adherens junction maintenance
GO:0035152	P	regulation of tube architecture, open tracheal system
GO:0035186	P	syncytial blastoderm mitotic cell cycle
GO:0036465	P	synaptic vesicle recycling
GO:0040008	P	regulation of growth
GO:0045202	C	synapse
GO:0045747	P	positive regulation of Notch signaling pathway
GO:0046667	P	compound eye retinal cell programmed cell death
GO:0046843	P	dorsal appendage formation
GO:0048172	P	regulation of short-term neuronal synaptic plasticity
GO:0048488	P	synaptic vesicle endocytosis
GO:0048489	P	synaptic vesicle transport
GO:0048499	P	synaptic vesicle membrane organization
GO:0050803	P	regulation of synapse structure or activity
GO:0060429	P	epithelium development
GO:0070864	C	sperm individualization complex
GO:0072583	P	clathrin-dependent endocytosis
GO:0072659	P	protein localization to plasma membrane
GO:0072686	C	mitotic spindle
GO:0090148	P	membrane fission
GO:0098793	C	presynapse
GO:1903475	P	mitotic actomyosin contractile ring assembly