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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2371 O_BomoSK12134_complete:A_BomoSK_comp12856_c0_seq1
413bp
 PREDICTED:_MOG_interacting_and_ectopic_P-granules_protein_1-like_[Amyelois_transitella]
GO:0002119 P nematode larval development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0007506 P gonadal mesoderm development
GO:0007548 P sex differentiation
GO:0008134 F transcription factor binding
GO:0008406 P gonad development
GO:0010468 P regulation of gene expression
GO:0017151 F DEAD/H-box RNA helicase binding
GO:0030154 P cell differentiation
GO:0040025 P vulval development
GO:0040035 P hermaphrodite genitalia development
GO:0042802 F identical protein binding
GO:0042826 F histone deacetylase binding
GO:0046872 F metal ion binding
GO:0048599 P oocyte development
2372 O_BomoSK12135_complete:A_BomoSK_comp12857_c0_seq2
342bp
 aspartylglucosaminidase_[Bombyx_mori]
GO:0003948 F N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
2373 O_BomoSK12136_complete:A_BomoSK_comp12857_c0_seq3
232bp
 aspartylglucosaminidase_[Bombyx_mori]
GO:0003948 F N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
2374 O_BomoSK12137_complete:A_BomoSK_comp12858_c0_seq1
434bp
 PREDICTED:_myoneurin-like_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2375 O_BomoSK12138_3prime_partial:A_BomoSK_comp12858_c0_seq2
402bp
 hypothetical_protein_RR48_01025_[Papilio_machaon]
2376 O_BomoSK12139_complete:A_BomoSK_comp12859_c0_seq1
287bp
 PREDICTED:_protein_ENL_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007379 P segment specification
GO:0008023 C transcription elongation factor complex
GO:0009952 P anterior/posterior pattern specification
GO:0070062 C extracellular exosome
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:2000096 P positive regulation of Wnt signaling pathway, planar cell polarity pathway
2377 O_BomoSK1213_complete:A_BomoSK_comp3998_c0_seq1
188bp
 PREDICTED:_dynamin-2-like_[Notothenia_coriiceps]
2378 O_BomoSK12140_complete:A_BomoSK_comp12859_c0_seq1
106bp
 hypothetical_protein_N839_17970_[uncultured_Desulfofustis_sp._PB-SRB1]
2379 O_BomoSK12141_complete:A_BomoSK_comp12859_c0_seq2
287bp
 PREDICTED:_protein_ENL_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007379 P segment specification
GO:0008023 C transcription elongation factor complex
GO:0009952 P anterior/posterior pattern specification
GO:0070062 C extracellular exosome
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:2000096 P positive regulation of Wnt signaling pathway, planar cell polarity pathway
2380 O_BomoSK12142_complete:A_BomoSK_comp12859_c0_seq2
106bp
 hypothetical_protein_N839_17970_[uncultured_Desulfofustis_sp._PB-SRB1]
2381 O_BomoSK12143_complete:A_BomoSK_comp12861_c0_seq1
256bp
 phosphoglyceromutase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004082 F bisphosphoglycerate mutase activity
GO:0004083 F bisphosphoglycerate 2-phosphatase activity
GO:0004619 F phosphoglycerate mutase activity
GO:0005829 C cytosol
GO:0006094 P gluconeogenesis
GO:0006096 P glycolytic process
GO:0008152 P metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016853 F isomerase activity
GO:0016868 F intramolecular transferase activity, phosphotransferases
GO:0043209 C myelin sheath
GO:0043456 P regulation of pentose-phosphate shunt
GO:0046538 F 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity
2382 O_BomoSK12144_complete:A_BomoSK_comp12861_c0_seq1
117bp
 hypothetical_protein_[Mastigocladus_laminosus]
2383 O_BomoSK12145_3prime_partial:A_BomoSK_comp12862_c0_seq1
844bp
 PREDICTED:_dipeptidyl_peptidase_9-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004177 F aminopeptidase activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
2384 O_BomoSK12146_5prime_partial:A_BomoSK_comp12862_c0_seq1
138bp
 sugar_ABC_transporter_ATP-binding_protein_[Rhodobacteraceae_bacterium_PD-2]
2385 O_BomoSK12147_complete:A_BomoSK_comp12862_c0_seq1
109bp
 aminotransferase_[Comamonadaceae_bacterium_BICA1-1]
2386 O_BomoSK12148_complete:A_BomoSK_comp12863_c0_seq2
434bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_calypso_isoform_X2_[Bombyx_mori]
GO:0000790 C chromatin
GO:0003682 F chromatin binding
GO:0004843 F thiol-dependent deubiquitinase
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0035517 C PR-DUB complex
GO:0035522 P monoubiquitinated histone H2A deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
2387 O_BomoSK12149_complete:A_BomoSK_comp12864_c0_seq1
390bp
 PREDICTED:_serine--pyruvate_aminotransferase-like_[Amyelois_transitella]
GO:0003824 F catalytic activity
GO:0004760 F serine-pyruvate transaminase activity
GO:0005102 F signaling receptor binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005777 C peroxisome
GO:0005782 C peroxisomal matrix
GO:0007219 P Notch signaling pathway
GO:0008453 F alanine-glyoxylate transaminase activity
GO:0008483 F transaminase activity
GO:0009436 P glyoxylate catabolic process
GO:0010498 P proteasomal protein catabolic process
GO:0016597 F amino acid binding
GO:0016740 F transferase activity
GO:0019265 P glycine biosynthetic process, by transamination of glyoxylate
GO:0019448 P L-cysteine catabolic process
GO:0030170 F pyridoxal phosphate binding
GO:0042803 F protein homodimerization activity
GO:0042853 P L-alanine catabolic process
GO:0042866 P pyruvate biosynthetic process
GO:0043621 F protein self-association
GO:0046487 P glyoxylate metabolic process
GO:0046724 P oxalic acid secretion
GO:0051384 P response to glucocorticoid
GO:0051591 P response to cAMP
2388 O_BomoSK1214_complete:A_BomoSK_comp3998_c0_seq1
102bp
 MULTISPECIES:_ABC_transporter_[Mycobacterium_chelonae_group]
2389 O_BomoSK12150_complete:A_BomoSK_comp12864_c0_seq2
307bp
 PREDICTED:_serine--pyruvate_aminotransferase-like_[Amyelois_transitella]
GO:0003824 F catalytic activity
GO:0004760 F serine-pyruvate transaminase activity
GO:0005102 F signaling receptor binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005777 C peroxisome
GO:0005782 C peroxisomal matrix
GO:0007219 P Notch signaling pathway
GO:0008453 F alanine-glyoxylate transaminase activity
GO:0008483 F transaminase activity
GO:0009436 P glyoxylate catabolic process
GO:0010498 P proteasomal protein catabolic process
GO:0016597 F amino acid binding
GO:0016740 F transferase activity
GO:0019265 P glycine biosynthetic process, by transamination of glyoxylate
GO:0019448 P L-cysteine catabolic process
GO:0030170 F pyridoxal phosphate binding
GO:0042803 F protein homodimerization activity
GO:0042853 P L-alanine catabolic process
GO:0042866 P pyruvate biosynthetic process
GO:0043621 F protein self-association
GO:0046487 P glyoxylate metabolic process
GO:0046724 P oxalic acid secretion
GO:0051384 P response to glucocorticoid
GO:0051591 P response to cAMP
2390 O_BomoSK12151_complete:A_BomoSK_comp12865_c0_seq1
1337bp
 hypothetical_protein_KGM_15744_[Danaus_plexippus]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0007269 P neurotransmitter secretion
GO:0007298 P border follicle cell migration
GO:0008021 C synaptic vesicle
GO:0016192 P vesicle-mediated transport
GO:0030234 F enzyme regulator activity
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0046982 F protein heterodimerization activity
GO:0060025 P regulation of synaptic activity
2391 O_BomoSK12152_complete:A_BomoSK_comp12865_c0_seq2
927bp
 hypothetical_protein_KGM_15744_[Danaus_plexippus]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0007269 P neurotransmitter secretion
GO:0007298 P border follicle cell migration
GO:0008021 C synaptic vesicle
GO:0016192 P vesicle-mediated transport
GO:0030234 F enzyme regulator activity
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0046982 F protein heterodimerization activity
GO:0060025 P regulation of synaptic activity
2392 O_BomoSK12153_complete:A_BomoSK_comp12866_c0_seq1
912bp
 PREDICTED:_ephrin_type-A_receptor_3,_partial_[Bombyx_mori]
2393 O_BomoSK12154_complete:A_BomoSK_comp12866_c0_seq1
100bp
 type_III_effector_HopAG1_[Pseudomonas_syringae_pv._actinidiae_ICMP_19096]
2394 O_BomoSK12155_3prime_partial:A_BomoSK_comp12866_c0_seq2
1042bp
 PREDICTED:_ephrin_type-A_receptor_3,_partial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005509 F calcium ion binding
GO:0005524 F ATP binding
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007030 P Golgi organization
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0042060 P wound healing
GO:0045177 C apical part of cell
GO:0045792 P negative regulation of cell size
GO:0090303 P positive regulation of wound healing
2395 O_BomoSK12156_5prime_partial:A_BomoSK_comp12866_c0_seq2
101bp
 PREDICTED:_protein_Wnt-11,_partial_[Equus_caballus]
2396 O_BomoSK12157_complete:A_BomoSK_comp12866_c0_seq2
100bp
 type_III_effector_HopAG1_[Pseudomonas_syringae_pv._actinidiae_ICMP_19096]
2397 O_BomoSK12158_3prime_partial:A_BomoSK_comp12867_c0_seq1
2335bp
 target_of_rapamycin_isoform_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001558 P regulation of cell growth
GO:0001934 P positive regulation of protein phosphorylation
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007411 P axon guidance
GO:0007430 P terminal branching, open tracheal system
GO:0007520 P myoblast fusion
GO:0007525 P somatic muscle development
GO:0007584 P response to nutrient
GO:0008144 F obsolete drug binding
GO:0008340 P determination of adult lifespan
GO:0008406 P gonad development
GO:0009594 P detection of nutrient
GO:0016242 P negative regulation of macroautophagy
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030307 P positive regulation of cell growth
GO:0031931 C TORC1 complex
GO:0031932 C TORC2 complex
GO:0032456 P endocytic recycling
GO:0035264 P multicellular organism growth
GO:0040007 P growth
GO:0040018 P positive regulation of multicellular organism growth
GO:0042331 P phototaxis
GO:0043621 F protein self-association
GO:0045176 P apical protein localization
GO:0045793 P positive regulation of cell size
GO:0046622 P positive regulation of organ growth
GO:0048142 P germarium-derived cystoblast division
GO:0048813 P dendrite morphogenesis
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0090070 P positive regulation of ribosome biogenesis
GO:2000331 P regulation of terminal button organization
GO:2000377 P regulation of reactive oxygen species metabolic process
GO:2001023 P regulation of response to drug
2398 O_BomoSK12159_5prime_partial:A_BomoSK_comp12867_c0_seq1
142bp
2399 O_BomoSK1215_3prime_partial:A_BomoSK_comp3998_c0_seq2
774bp
 PREDICTED:_dynamin_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000281 P mitotic cytokinesis
GO:0001661 P conditioned taste aversion
GO:0001738 P morphogenesis of a polarized epithelium
GO:0003777 F microtubule motor activity
GO:0003779 F actin binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007017 P microtubule-based process
GO:0007291 P sperm individualization
GO:0007293 P germarium-derived egg chamber formation
GO:0007298 P border follicle cell migration
GO:0007349 P cellularization
GO:0007424 P open tracheal system development
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007435 P salivary gland morphogenesis
GO:0007612 P learning
GO:0007613 P memory
GO:0007614 P short-term memory
GO:0007637 P proboscis extension reflex
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0008355 P olfactory learning
GO:0009408 P response to heat
GO:0016185 P synaptic vesicle budding from presynaptic endocytic zone membrane
GO:0016192 P vesicle-mediated transport
GO:0016787 F hydrolase activity
GO:0030198 P extracellular matrix organization
GO:0030536 P larval feeding behavior
GO:0030707 P ovarian follicle cell development
GO:0030866 P cortical actin cytoskeleton organization
GO:0032956 P regulation of actin cytoskeleton organization
GO:0032970 P regulation of actin filament-based process
GO:0034334 P adherens junction maintenance
GO:0035152 P regulation of tube architecture, open tracheal system
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0036465 P synaptic vesicle recycling
GO:0040008 P regulation of growth
GO:0045202 C synapse
GO:0045747 P positive regulation of Notch signaling pathway
GO:0046667 P compound eye retinal cell programmed cell death
GO:0046843 P dorsal appendage formation
GO:0048172 P regulation of short-term neuronal synaptic plasticity
GO:0048488 P synaptic vesicle endocytosis
GO:0048489 P synaptic vesicle transport
GO:0048499 P synaptic vesicle membrane organization
GO:0050803 P regulation of synapse structure or activity
GO:0060429 P epithelium development
GO:0070864 C sperm individualization complex
GO:0072583 P clathrin-dependent endocytosis
GO:0072659 P protein localization to plasma membrane
GO:0072686 C mitotic spindle
GO:0090148 P membrane fission
GO:0098793 C presynapse
GO:1903475 P mitotic actomyosin contractile ring assembly
2400 O_BomoSK12160_complete:A_BomoSK_comp12867_c0_seq1
119bp
 multidrug_ABC_transporter_ATP-binding_protein_[Butyrivibrio_fibrisolvens]
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