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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2311 O_BomoSK12080_3prime_partial:A_BomoSK_comp12833_c0_seq1
647bp
 PREDICTED:_phosphorylated_CTD-interacting_factor_1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0010923 P negative regulation of phosphatase activity
GO:0015630 C microtubule cytoskeleton
GO:0045171 C intercellular bridge
2312 O_BomoSK12081_5prime_partial:A_BomoSK_comp12833_c0_seq1
162bp
 hypothetical_protein_[Frankia_sp._EuI1c]
2313 O_BomoSK12082_complete:A_BomoSK_comp12833_c0_seq1
103bp
 PREDICTED:_interleukin-10_receptor_subunit_beta_isoform_X2_[Equus_caballus]
2314 O_BomoSK12083_complete:A_BomoSK_comp12835_c0_seq1
269bp
 PREDICTED:_uncharacterized_protein_LOC101735385_isoform_X1_[Bombyx_mori]
2315 O_BomoSK12084_complete:A_BomoSK_comp12835_c0_seq1
162bp
2316 O_BomoSK12085_complete:A_BomoSK_comp12835_c0_seq1
103bp
 diguanylate_cyclase_[Phaeobacter_gallaeciensis]
2317 O_BomoSK12086_5prime_partial:A_BomoSK_comp12835_c0_seq2
361bp
 PREDICTED:_uncharacterized_protein_LOC101735385_isoform_X1_[Bombyx_mori]
2318 O_BomoSK12087_complete:A_BomoSK_comp12835_c0_seq2
162bp
2319 O_BomoSK12088_complete:A_BomoSK_comp12835_c0_seq2
103bp
 diguanylate_cyclase_[Phaeobacter_gallaeciensis]
2320 O_BomoSK12089_5prime_partial:A_BomoSK_comp12836_c0_seq1
116bp
2321 O_BomoSK1208_5prime_partial:A_BomoSK_comp3994_c0_seq1
782bp
 PREDICTED:_RNA_polymerase-associated_protein_Rtf1-like_isoform_X1_[Plutella_xylostella]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0007219 P Notch signaling pathway
GO:0016570 P histone modification
GO:0016593 C Cdc73/Paf1 complex
GO:0035327 C euchromatin
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051568 P histone H3-K4 methylation
GO:0051571 P positive regulation of histone H3-K4 methylation
2322 O_BomoSK12090_complete:A_BomoSK_comp12837_c0_seq1
146bp
 Mariner_Mos1_transposase,_partial_[Acromyrmex_echinatior]
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2323 O_BomoSK12091_complete:A_BomoSK_comp12837_c0_seq2
249bp
 PREDICTED:_flap_endonuclease_1-like_isoform_X2_[Polistes_dominula]
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2324 O_BomoSK12092_complete:A_BomoSK_comp12837_c0_seq2
165bp
 PREDICTED:_thyroid_adenoma-associated_protein_homolog_[Plutella_xylostella]
2325 O_BomoSK12093_complete:A_BomoSK_comp12838_c0_seq1
210bp
 PREDICTED:_golgi_SNAP_receptor_complex_member_2_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000149 F SNARE binding
GO:0005484 F SNAP receptor activity
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006623 P protein targeting to vacuole
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0006896 P Golgi to vacuole transport
GO:0006906 P vesicle fusion
GO:0006909 P phagocytosis
GO:0007430 P terminal branching, open tracheal system
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0031201 C SNARE complex
GO:0031902 C late endosome membrane
GO:0042147 P retrograde transport, endosome to Golgi
GO:0048280 P vesicle fusion with Golgi apparatus
GO:0060439 P trachea morphogenesis
2326 O_BomoSK12094_3prime_partial:A_BomoSK_comp12840_c0_seq1
367bp
 PREDICTED:_zinc_finger_protein_598_[Amyelois_transitella]
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
2327 O_BomoSK12095_3prime_partial:A_BomoSK_comp12840_c0_seq2
367bp
 PREDICTED:_zinc_finger_protein_598_[Amyelois_transitella]
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
2328 O_BomoSK12096_complete:A_BomoSK_comp12840_c0_seq3
367bp
 PREDICTED:_zinc_finger_protein_598_[Amyelois_transitella]
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
2329 O_BomoSK12097_complete:A_BomoSK_comp12840_c0_seq4
367bp
 PREDICTED:_zinc_finger_protein_598_[Amyelois_transitella]
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
2330 O_BomoSK12098_3prime_partial:A_BomoSK_comp12841_c0_seq2
362bp
 PREDICTED:_mitochondrial_chaperone_BCS1_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034551 P mitochondrial respiratory chain complex III assembly
2331 O_BomoSK12099_complete:A_BomoSK_comp12841_c0_seq3
128bp
 PREDICTED:_mitochondrial_chaperone_BCS1_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034551 P mitochondrial respiratory chain complex III assembly
2332 O_BomoSK1209_complete:A_BomoSK_comp3994_c0_seq1
168bp
2333 O_BomoSK120_internal:A_BomoSK_comp408_c0_seq1
363bp
 PREDICTED:_uncharacterized_protein_LOC101742281_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0030246 F carbohydrate binding
2334 O_BomoSK12100_complete:A_BomoSK_comp12842_c0_seq1
111bp
 PREDICTED:_cytochrome_b5-like_[Plutella_xylostella]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005811 C lipid droplet
GO:0009055 F electron transfer activity
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0035206 P regulation of hemocyte proliferation
GO:0043231 C intracellular membrane-bounded organelle
GO:0045610 P regulation of hemocyte differentiation
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
2335 O_BomoSK12101_complete:A_BomoSK_comp12842_c0_seq2
130bp
 PREDICTED:_cytochrome_b5-like_isoform_X2_[Amyelois_transitella]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005811 C lipid droplet
GO:0009055 F electron transfer activity
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0035206 P regulation of hemocyte proliferation
GO:0043231 C intracellular membrane-bounded organelle
GO:0045610 P regulation of hemocyte differentiation
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
2336 O_BomoSK12102_complete:A_BomoSK_comp12845_c0_seq1
420bp
 PREDICTED:_lipoyltransferase_1,_mitochondrial_isoform_X1_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0006464 P cellular protein modification process
GO:0008150 P biological_process
GO:0009249 P protein lipoylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
2337 O_BomoSK12103_complete:A_BomoSK_comp12845_c0_seq2
416bp
 PREDICTED:_lipoyltransferase_1,_mitochondrial_isoform_X2_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0006464 P cellular protein modification process
GO:0008150 P biological_process
GO:0009249 P protein lipoylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
2338 O_BomoSK12104_complete:A_BomoSK_comp12845_c0_seq3
420bp
 PREDICTED:_lipoyltransferase_1,_mitochondrial_isoform_X1_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0006464 P cellular protein modification process
GO:0008150 P biological_process
GO:0009249 P protein lipoylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
2339 O_BomoSK12105_complete:A_BomoSK_comp12845_c0_seq4
416bp
 PREDICTED:_lipoyltransferase_1,_mitochondrial_isoform_X2_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0006464 P cellular protein modification process
GO:0008150 P biological_process
GO:0009249 P protein lipoylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
2340 O_BomoSK12106_5prime_partial:A_BomoSK_comp12846_c0_seq1
247bp
 surfeit_1_isoform_1_[Bombyx_mori]
GO:0004129 F cytochrome-c oxidase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005746 C mitochondrial respirasome
GO:0006119 P oxidative phosphorylation
GO:0006754 P ATP biosynthetic process
GO:0008535 P respiratory chain complex IV assembly
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055114 P obsolete oxidation-reduction process
GO:1902600 P proton transmembrane transport
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