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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2221 O_BomoSK119_5prime_partial:A_BomoSK_comp407_c1_seq1
107bp
 hypothetical_protein,_partial_[Rosa_rugosa]
2222 O_BomoSK11_internal:A_BomoSK_comp36_c1_seq1
104bp
 hypothetical_protein_KGM_01117_[Danaus_plexippus]
2223 O_BomoSK12000_internal:A_BomoSK_comp12802_c0_seq2
357bp
 PREDICTED:_liprin-beta-1_isoform_X7_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005615 C extracellular space
GO:0005622 C intracellular anatomical structure
2224 O_BomoSK12001_complete:A_BomoSK_comp12802_c0_seq2
150bp
 PREDICTED:_uncharacterized_protein_LOC105561575,_partial_[Vollenhovia_emeryi]
2225 O_BomoSK12002_internal:A_BomoSK_comp12802_c0_seq3
530bp
 PREDICTED:_liprin-beta-1_isoform_X5_[Bombyx_mori]
GO:0005615 C extracellular space
2226 O_BomoSK12003_complete:A_BomoSK_comp12802_c0_seq3
150bp
 PREDICTED:_uncharacterized_protein_LOC105561575,_partial_[Vollenhovia_emeryi]
2227 O_BomoSK12004_3prime_partial:A_BomoSK_comp12802_c0_seq4
417bp
 PREDICTED:_liprin-beta-1_isoform_X4_[Bombyx_mori]
GO:0005615 C extracellular space
2228 O_BomoSK12005_complete:A_BomoSK_comp12802_c0_seq4
150bp
 PREDICTED:_uncharacterized_protein_LOC105561575,_partial_[Vollenhovia_emeryi]
2229 O_BomoSK12006_3prime_partial:A_BomoSK_comp12802_c0_seq5
450bp
 PREDICTED:_liprin-beta-1_isoform_X1_[Bombyx_mori]
GO:0005615 C extracellular space
2230 O_BomoSK12007_complete:A_BomoSK_comp12802_c0_seq5
150bp
 PREDICTED:_uncharacterized_protein_LOC105561575,_partial_[Vollenhovia_emeryi]
2231 O_BomoSK12008_internal:A_BomoSK_comp12802_c0_seq7
563bp
 PREDICTED:_liprin-beta-1_isoform_X5_[Bombyx_mori]
GO:0005615 C extracellular space
2232 O_BomoSK12009_complete:A_BomoSK_comp12802_c0_seq7
150bp
 PREDICTED:_uncharacterized_protein_LOC105561575,_partial_[Vollenhovia_emeryi]
2233 O_BomoSK1200_complete:A_BomoSK_comp3989_c0_seq1
401bp
 PREDICTED:_probable_tyrosyl-DNA_phosphodiesterase_[Amyelois_transitella]
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007417 P central nervous system development
GO:0008081 F phosphoric diester hydrolase activity
GO:0016787 F hydrolase activity
GO:0017005 F 3'-tyrosyl-DNA phosphodiesterase activity
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2234 O_BomoSK12010_3prime_partial:A_BomoSK_comp12803_c0_seq1
1207bp
 PREDICTED:_disintegrin_and_metalloproteinase_domain-containing_protein_10_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0004222 F metalloendopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005798 C Golgi-associated vesicle
GO:0005802 C trans-Golgi network
GO:0006468 P protein phosphorylation
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0007162 P negative regulation of cell adhesion
GO:0007219 P Notch signaling pathway
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0019901 F protein kinase binding
GO:0042803 F protein homodimerization activity
GO:0045670 P regulation of osteoclast differentiation
GO:0046872 F metal ion binding
2235 O_BomoSK12011_complete:A_BomoSK_comp12803_c0_seq1
147bp
2236 O_BomoSK12012_complete:A_BomoSK_comp12803_c0_seq1
122bp
 PREDICTED:_tenascin-X_[Camelus_ferus]
2237 O_BomoSK12013_complete:A_BomoSK_comp12803_c0_seq1
108bp
 transcriptional_regulator_[Pontibacter_korlensis]
2238 O_BomoSK12014_complete:A_BomoSK_comp12803_c0_seq1
105bp
 Putative_adenylate_kinase-like_protein_C9orf98_[Echinococcus_granulosus]
2239 O_BomoSK12015_complete:A_BomoSK_comp12804_c1_seq1
184bp
 PREDICTED:_uncharacterized_protein_LOC106119134_[Papilio_xuthus]
2240 O_BomoSK12016_complete:A_BomoSK_comp12804_c1_seq1
114bp
 naringenin-chalcone_synthase_[Virgibacillus_halodenitrificans]
2241 O_BomoSK12017_complete:A_BomoSK_comp12805_c1_seq1
412bp
 PREDICTED:_beta-arrestin-1_isoform_X2_[Amyelois_transitella]
GO:0001934 P positive regulation of protein phosphorylation
GO:0002092 P positive regulation of receptor internalization
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0007165 P signal transduction
GO:0009968 P negative regulation of signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0031143 C pseudopodium
GO:0031410 C cytoplasmic vesicle
GO:0042995 C cell projection
2242 O_BomoSK12018_complete:A_BomoSK_comp12805_c1_seq1
146bp
 hypothetical_protein_G5I_03935_[Acromyrmex_echinatior]
2243 O_BomoSK12019_complete:A_BomoSK_comp12805_c1_seq1
112bp
 short-chain_dehydrogenase/reductase_SDR_[Halomonas_sp._54_146]
2244 O_BomoSK1201_complete:A_BomoSK_comp3989_c0_seq1
218bp
 PREDICTED:_probable_tyrosyl-DNA_phosphodiesterase_[Papilio_xuthus]
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007417 P central nervous system development
GO:0008081 F phosphoric diester hydrolase activity
GO:0016787 F hydrolase activity
GO:0017005 F 3'-tyrosyl-DNA phosphodiesterase activity
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2245 O_BomoSK12020_complete:A_BomoSK_comp12806_c0_seq1
242bp
 PREDICTED:_cytochrome_c_oxidase_assembly_protein_COX11,_mitochondrial_[Papilio_machaon]
GO:0004129 F cytochrome-c oxidase activity
GO:0005507 F copper ion binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0007585 P respiratory gaseous exchange by respiratory system
GO:0008535 P respiratory chain complex IV assembly
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033132 P negative regulation of glucokinase activity
GO:1902600 P proton transmembrane transport
2246 O_BomoSK12021_complete:A_BomoSK_comp12809_c0_seq1
249bp
 U2_small_nuclear_ribonucleoprotein_A'_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
2247 O_BomoSK12022_complete:A_BomoSK_comp12809_c0_seq2
259bp
 U2_small_nuclear_ribonucleoprotein_A'_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
2248 O_BomoSK12023_complete:A_BomoSK_comp12810_c0_seq1
311bp
 PREDICTED:_elongation_of_very_long_chain_fatty_acids_protein_AAEL008004-like_[Amyelois_transitella]
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0030176 C integral component of endoplasmic reticulum membrane
2249 O_BomoSK12024_complete:A_BomoSK_comp12811_c0_seq1
453bp
 PREDICTED:_cytochrome_b5-related_protein-like_[Papilio_machaon]
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0006629 P lipid metabolic process
GO:0009055 F electron transfer activity
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
2250 O_BomoSK12025_complete:A_BomoSK_comp12812_c0_seq1
1276bp
 PREDICTED:_tetratricopeptide_repeat_protein_37_[Papilio_xuthus]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0035327 C euchromatin
GO:0055087 C Ski complex
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