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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2251 O_BomoSK12026_complete:A_BomoSK_comp12812_c0_seq2
1276bp
 PREDICTED:_tetratricopeptide_repeat_protein_37_[Papilio_xuthus]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0035327 C euchromatin
GO:0055087 C Ski complex
2252 O_BomoSK12027_complete:A_BomoSK_comp12812_c0_seq2
237bp
 tRNA_(guanine-N(7)-)-methyltransferase_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0008176 F tRNA (guanine-N7-)-methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0036265 P RNA (guanine-N7)-methylation
2253 O_BomoSK12028_complete:A_BomoSK_comp12812_c0_seq3
198bp
 tRNA_(guanine-N(7)-)-methyltransferase_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0008176 F tRNA (guanine-N7-)-methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0036265 P RNA (guanine-N7)-methylation
2254 O_BomoSK12029_complete:A_BomoSK_comp12813_c0_seq1
278bp
 PREDICTED:_BSD_domain-containing_protein_1-B-like_[Bombyx_mori]
2255 O_BomoSK1202_complete:A_BomoSK_comp3989_c0_seq1
106bp
 PREDICTED:_alcohol-forming_fatty_acyl-CoA_reductase-like_isoform_X3_[Nelumbo_nucifera]
2256 O_BomoSK12030_complete:A_BomoSK_comp12813_c0_seq2
397bp
 PREDICTED:_BSD_domain-containing_protein_1-B-like_[Bombyx_mori]
2257 O_BomoSK12031_complete:A_BomoSK_comp12814_c0_seq1
1408bp
 PREDICTED:_mucin-5AC_[Amyelois_transitella]
2258 O_BomoSK12032_complete:A_BomoSK_comp12816_c0_seq1
506bp
 PREDICTED:_non-lysosomal_glucosylceramidase-like_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004348 F glucosylceramidase activity
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0008152 P metabolic process
GO:0008206 P bile acid metabolic process
GO:0008422 F beta-glucosidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016139 P glycoside catabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
2259 O_BomoSK12033_3prime_partial:A_BomoSK_comp12816_c0_seq1
123bp
 PREDICTED:_non-lysosomal_glucosylceramidase-like_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004348 F glucosylceramidase activity
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0008152 P metabolic process
GO:0008206 P bile acid metabolic process
GO:0008422 F beta-glucosidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016139 P glycoside catabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
2260 O_BomoSK12034_3prime_partial:A_BomoSK_comp12816_c0_seq2
627bp
 PREDICTED:_non-lysosomal_glucosylceramidase-like_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004348 F glucosylceramidase activity
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0008152 P metabolic process
GO:0008206 P bile acid metabolic process
GO:0008422 F beta-glucosidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016139 P glycoside catabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
2261 O_BomoSK12035_3prime_partial:A_BomoSK_comp12817_c0_seq1
488bp
 PREDICTED:_CCA_tRNA_nucleotidyltransferase_1,_mitochondrial_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0001680 P tRNA 3'-terminal CCA addition
GO:0003723 F RNA binding
GO:0004810 F tRNA adenylyltransferase activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0006396 P RNA processing
GO:0008033 P tRNA processing
GO:0009022 F tRNA nucleotidyltransferase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0042780 P tRNA 3'-end processing
GO:0052927 F CTP:tRNA cytidylyltransferase activity
GO:0052928 F CTP:3'-cytidine-tRNA cytidylyltransferase activity
GO:0052929 F ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity
2262 O_BomoSK12036_complete:A_BomoSK_comp12817_c0_seq2
315bp
 PREDICTED:_CCA_tRNA_nucleotidyltransferase_1,_mitochondrial_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0001680 P tRNA 3'-terminal CCA addition
GO:0003723 F RNA binding
GO:0004810 F tRNA adenylyltransferase activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006396 P RNA processing
GO:0006626 P protein targeting to mitochondrion
GO:0008033 P tRNA processing
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0034062 F 5'-3' RNA polymerase activity
GO:0042780 P tRNA 3'-end processing
GO:0052927 F CTP:tRNA cytidylyltransferase activity
GO:0052928 F CTP:3'-cytidine-tRNA cytidylyltransferase activity
GO:0052929 F ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity
GO:1990180 P mitochondrial tRNA 3'-end processing
2263 O_BomoSK12037_complete:A_BomoSK_comp12817_c1_seq1
271bp
 PREDICTED:_uncharacterized_protein_LOC106130647_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0008289 F lipid binding
GO:0009838 P abscission
GO:0030496 C midbody
GO:0032154 C cleavage furrow
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0032466 P negative regulation of cytokinesis
GO:0046872 F metal ion binding
GO:0051301 P cell division
2264 O_BomoSK12038_complete:A_BomoSK_comp12817_c1_seq1
166bp
 sugar_ABC_transporter_permease_[Lechevalieria_aerocolonigenes]
2265 O_BomoSK12039_complete:A_BomoSK_comp12817_c1_seq2
305bp
 PREDICTED:_uncharacterized_protein_LOC106130647_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0008289 F lipid binding
GO:0009838 P abscission
GO:0030496 C midbody
GO:0032154 C cleavage furrow
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0032466 P negative regulation of cytokinesis
GO:0046872 F metal ion binding
GO:0051301 P cell division
2266 O_BomoSK1203_internal:A_BomoSK_comp3990_c0_seq1
255bp
 PREDICTED:_uncharacterized_protein_LOC106713118_[Papilio_machaon]
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0006334 P nucleosome assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0016407 F acetyltransferase activity
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0043966 P histone H3 acetylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0070776 C MOZ/MORF histone acetyltransferase complex
2267 O_BomoSK12040_complete:A_BomoSK_comp12817_c1_seq2
166bp
 sugar_ABC_transporter_permease_[Lechevalieria_aerocolonigenes]
2268 O_BomoSK12041_complete:A_BomoSK_comp12818_c0_seq1
316bp
 PREDICTED:_E3_ubiquitin-protein_ligase_NRDP1_isoform_X1_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0016881 F acid-amino acid ligase activity
GO:0031386 F protein tag
GO:0046872 F metal ion binding
GO:0097191 P extrinsic apoptotic signaling pathway
2269 O_BomoSK12042_3prime_partial:A_BomoSK_comp12819_c0_seq1
415bp
 PREDICTED:_probable_ubiquitin_carboxyl-terminal_hydrolase_FAF-X_isoform_X2_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006897 P endocytosis
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0007601 P visual perception
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008354 P germ cell migration
GO:0008583 P mystery cell differentiation
GO:0009950 P dorsal/ventral axis specification
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0035192 P nuclear cortical migration
GO:0036459 F thiol-dependent deubiquitinase
GO:0045824 P negative regulation of innate immune response
GO:0045861 P negative regulation of proteolysis
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050896 P response to stimulus
2270 O_BomoSK12043_internal:A_BomoSK_comp12819_c0_seq2
342bp
 PREDICTED:_probable_ubiquitin_carboxyl-terminal_hydrolase_FAF-X_isoform_X2_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006897 P endocytosis
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0007601 P visual perception
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008354 P germ cell migration
GO:0008583 P mystery cell differentiation
GO:0009950 P dorsal/ventral axis specification
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0035192 P nuclear cortical migration
GO:0036459 F thiol-dependent deubiquitinase
GO:0045824 P negative regulation of innate immune response
GO:0045861 P negative regulation of proteolysis
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050896 P response to stimulus
2271 O_BomoSK12044_internal:A_BomoSK_comp12819_c0_seq3
923bp
 PREDICTED:_probable_ubiquitin_carboxyl-terminal_hydrolase_FAF-X_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001764 P neuron migration
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007292 P female gamete generation
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016020 C membrane
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030426 C growth cone
GO:0030509 P BMP signaling pathway
GO:0036459 F thiol-dependent deubiquitinase
GO:0042995 C cell projection
GO:0044267 P cellular protein metabolic process
GO:0048675 P axon extension
GO:0051301 P cell division
GO:0070410 F co-SMAD binding
2272 O_BomoSK12045_complete:A_BomoSK_comp12820_c0_seq1
436bp
 PREDICTED:_bromodomain-containing_protein_8-like_isoform_X2_[Bombyx_mori]
GO:0000812 C Swr1 complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
2273 O_BomoSK12046_complete:A_BomoSK_comp12820_c0_seq1
217bp
 PREDICTED:_fibrous_sheath_CABYR-binding_protein-like_[Amyelois_transitella]
GO:0000812 C Swr1 complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
2274 O_BomoSK12047_complete:A_BomoSK_comp12820_c0_seq1
201bp
 PREDICTED:_membrane-associated_tyrosine-_and_threonine-specific_cdc2-inhibitory_kinase-like_[Protobothrops_mucrosquamatus]
2275 O_BomoSK12048_complete:A_BomoSK_comp12820_c0_seq1
148bp
 Asp/Glu/hydantoin_racemase_[Amantichitinum_ursilacus]
2276 O_BomoSK12049_complete:A_BomoSK_comp12820_c0_seq1
146bp
2277 O_BomoSK1204_5prime_partial:A_BomoSK_comp3990_c0_seq1
120bp
 hypothetical_protein_THAOC_06149_[Thalassiosira_oceanica]
2278 O_BomoSK12050_complete:A_BomoSK_comp12821_c0_seq1
204bp
 PREDICTED:_protein_preli-like_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0015914 P phospholipid transport
GO:0030061 C mitochondrial crista
GO:0048813 P dendrite morphogenesis
GO:0070584 P mitochondrion morphogenesis
GO:1990050 F phosphatidic acid transfer activity
2279 O_BomoSK12051_complete:A_BomoSK_comp12821_c0_seq1
137bp
 PREDICTED:_polyribonucleotide_nucleotidyltransferase_1,_mitochondrial_[Alligator_sinensis]
2280 O_BomoSK12052_complete:A_BomoSK_comp12821_c0_seq1
125bp
 PREDICTED:_maestro_heat-like_repeat-containing_protein_family_member_1_isoform_X2_[Nothobranchius_furzeri]
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