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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2191 O_BomoSK11973_3prime_partial:A_BomoSK_comp12794_c0_seq3
411bp
 PREDICTED:_phosphatidylinositol-binding_clathrin_assembly_protein_LAP_[Bombyx_mori]
GO:0005543 F phospholipid binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007270 P neuron-neuron synaptic transmission
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016183 P synaptic vesicle coating
GO:0030131 C clathrin adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0030276 F clathrin binding
GO:0031410 C cytoplasmic vesicle
GO:0042331 P phototaxis
GO:0048268 P clathrin coat assembly
GO:0048488 P synaptic vesicle endocytosis
GO:0048489 P synaptic vesicle transport
GO:2000370 P positive regulation of clathrin-dependent endocytosis
2192 O_BomoSK11974_3prime_partial:A_BomoSK_comp12794_c0_seq4
392bp
 PREDICTED:_phosphatidylinositol-binding_clathrin_assembly_protein_LAP_[Bombyx_mori]
GO:0005543 F phospholipid binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007270 P neuron-neuron synaptic transmission
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016183 P synaptic vesicle coating
GO:0030131 C clathrin adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0030276 F clathrin binding
GO:0031410 C cytoplasmic vesicle
GO:0042331 P phototaxis
GO:0048268 P clathrin coat assembly
GO:0048488 P synaptic vesicle endocytosis
GO:0048489 P synaptic vesicle transport
GO:2000370 P positive regulation of clathrin-dependent endocytosis
2193 O_BomoSK11975_internal:A_BomoSK_comp12796_c0_seq1
917bp
 PREDICTED:_rho_GTPase-activating_protein_21_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007030 P Golgi organization
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0030100 P regulation of endocytosis
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043547 P positive regulation of GTPase activity
GO:0051645 P Golgi localization
GO:0051683 P establishment of Golgi localization
GO:0051684 P maintenance of Golgi location
GO:0072384 P organelle transport along microtubule
2194 O_BomoSK11976_5prime_partial:A_BomoSK_comp12796_c0_seq1
157bp
 hypothetical_protein_M513_05336_[Trichuris_suis]
2195 O_BomoSK11977_internal:A_BomoSK_comp12796_c0_seq2
989bp
 PREDICTED:_rho_GTPase-activating_protein_21_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007030 P Golgi organization
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0030100 P regulation of endocytosis
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043547 P positive regulation of GTPase activity
GO:0051645 P Golgi localization
GO:0051683 P establishment of Golgi localization
GO:0051684 P maintenance of Golgi location
GO:0072384 P organelle transport along microtubule
2196 O_BomoSK11978_5prime_partial:A_BomoSK_comp12796_c0_seq2
157bp
 hypothetical_protein_M513_05336_[Trichuris_suis]
2197 O_BomoSK11979_internal:A_BomoSK_comp12796_c0_seq3
593bp
 PREDICTED:_rho_GTPase-activating_protein_21_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007030 P Golgi organization
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0030100 P regulation of endocytosis
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043547 P positive regulation of GTPase activity
GO:0051645 P Golgi localization
GO:0051683 P establishment of Golgi localization
GO:0051684 P maintenance of Golgi location
GO:0072384 P organelle transport along microtubule
2198 O_BomoSK1197_complete:A_BomoSK_comp3986_c0_seq1
134bp
2199 O_BomoSK11980_internal:A_BomoSK_comp12796_c0_seq4
665bp
 PREDICTED:_rho_GTPase-activating_protein_21_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007030 P Golgi organization
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0030100 P regulation of endocytosis
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043547 P positive regulation of GTPase activity
GO:0051645 P Golgi localization
GO:0051683 P establishment of Golgi localization
GO:0051684 P maintenance of Golgi location
GO:0072384 P organelle transport along microtubule
2200 O_BomoSK11981_internal:A_BomoSK_comp12796_c0_seq5
384bp
 PREDICTED:_rho_GTPase-activating_protein_21_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043547 P positive regulation of GTPase activity
2201 O_BomoSK11982_5prime_partial:A_BomoSK_comp12796_c0_seq5
157bp
 hypothetical_protein_M513_05336_[Trichuris_suis]
2202 O_BomoSK11983_internal:A_BomoSK_comp12797_c0_seq1
1787bp
 PREDICTED:_CAD_protein_isoform_X1_[Amyelois_transitella]
GO:0000050 P urea cycle
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004070 F aspartate carbamoyltransferase activity
GO:0004087 F carbamoyl-phosphate synthase (ammonia) activity
GO:0004088 F carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
GO:0004151 F dihydroorotase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006207 P 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006221 P pyrimidine nucleotide biosynthetic process
GO:0006520 P cellular amino acid metabolic process
GO:0006526 P arginine biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0006807 P nitrogen compound metabolic process
GO:0008152 P metabolic process
GO:0016597 F amino acid binding
GO:0016740 F transferase activity
GO:0016743 F carboxyl- or carbamoyltransferase activity
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016812 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0016874 F ligase activity
GO:0044205 P 'de novo' UMP biosynthetic process
GO:0046872 F metal ion binding
GO:0070406 F glutamine binding
2203 O_BomoSK11984_complete:A_BomoSK_comp12797_c0_seq1
109bp
 Uncharacterised_protein_[Bordetella_pertussis]
2204 O_BomoSK11985_5prime_partial:A_BomoSK_comp12797_c0_seq2
481bp
 PREDICTED:_CAD_protein_isoform_X1_[Papilio_machaon]
GO:0000050 P urea cycle
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004070 F aspartate carbamoyltransferase activity
GO:0004087 F carbamoyl-phosphate synthase (ammonia) activity
GO:0004088 F carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
GO:0004151 F dihydroorotase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006207 P 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006221 P pyrimidine nucleotide biosynthetic process
GO:0006520 P cellular amino acid metabolic process
GO:0006526 P arginine biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0006807 P nitrogen compound metabolic process
GO:0008152 P metabolic process
GO:0016597 F amino acid binding
GO:0016740 F transferase activity
GO:0016743 F carboxyl- or carbamoyltransferase activity
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016812 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0016874 F ligase activity
GO:0044205 P 'de novo' UMP biosynthetic process
GO:0046872 F metal ion binding
GO:0070406 F glutamine binding
2205 O_BomoSK11986_5prime_partial:A_BomoSK_comp12797_c0_seq3
472bp
 PREDICTED:_CAD_protein_isoform_X1_[Papilio_machaon]
GO:0000050 P urea cycle
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004070 F aspartate carbamoyltransferase activity
GO:0004087 F carbamoyl-phosphate synthase (ammonia) activity
GO:0004088 F carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
GO:0004151 F dihydroorotase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006207 P 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006221 P pyrimidine nucleotide biosynthetic process
GO:0006520 P cellular amino acid metabolic process
GO:0006526 P arginine biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0006807 P nitrogen compound metabolic process
GO:0008152 P metabolic process
GO:0016597 F amino acid binding
GO:0016740 F transferase activity
GO:0016743 F carboxyl- or carbamoyltransferase activity
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016812 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0016874 F ligase activity
GO:0044205 P 'de novo' UMP biosynthetic process
GO:0046872 F metal ion binding
GO:0070406 F glutamine binding
2206 O_BomoSK11987_complete:A_BomoSK_comp12798_c0_seq1
754bp
 PREDICTED:_uncharacterized_protein_LOC106129409_[Amyelois_transitella]
2207 O_BomoSK11988_complete:A_BomoSK_comp12798_c0_seq1
162bp
 Immunoglobulin-like_fold_[Ostreococcus_tauri]
2208 O_BomoSK11989_complete:A_BomoSK_comp12798_c0_seq1
159bp
 PREDICTED:_uncharacterized_protein_LOC101744188_[Bombyx_mori]
2209 O_BomoSK1198_complete:A_BomoSK_comp3986_c0_seq1
114bp
 peptidase_dimerization_domain_protein_[Chitinophagaceae_bacterium_PMP191F]
2210 O_BomoSK11990_complete:A_BomoSK_comp12798_c0_seq1
157bp
 hypothetical_protein_RR48_04989_[Papilio_machaon]
2211 O_BomoSK11991_complete:A_BomoSK_comp12798_c0_seq1
145bp
 PREDICTED:_uncharacterized_protein_LOC101744188_[Bombyx_mori]
2212 O_BomoSK11992_complete:A_BomoSK_comp12798_c0_seq1
141bp
 PREDICTED:_uncharacterized_protein_LOC106137743_[Amyelois_transitella]
2213 O_BomoSK11993_complete:A_BomoSK_comp12798_c0_seq2
479bp
 PREDICTED:_aromatic-L-amino-acid_decarboxylase_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004058 F aromatic-L-amino-acid decarboxylase activity
GO:0006520 P cellular amino acid metabolic process
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0019752 P carboxylic acid metabolic process
GO:0030170 F pyridoxal phosphate binding
GO:0042423 P catecholamine biosynthetic process
2214 O_BomoSK11994_complete:A_BomoSK_comp12798_c0_seq2
119bp
 hypothetical_protein_[Sediminibacterium_sp._OR53]
2215 O_BomoSK11995_3prime_partial:A_BomoSK_comp12799_c0_seq1
121bp
 glyoxalase,_partial_[Kouleothrix_aurantiaca]
2216 O_BomoSK11996_internal:A_BomoSK_comp12801_c0_seq1
107bp
 gag-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
2217 O_BomoSK11997_internal:A_BomoSK_comp12801_c0_seq1
106bp
 PREDICTED:_uncharacterized_protein_LOC101737480_[Bombyx_mori]
2218 O_BomoSK11998_internal:A_BomoSK_comp12802_c0_seq1
390bp
 PREDICTED:_liprin-beta-1_isoform_X7_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005615 C extracellular space
GO:0005622 C intracellular anatomical structure
2219 O_BomoSK11999_complete:A_BomoSK_comp12802_c0_seq1
150bp
 PREDICTED:_uncharacterized_protein_LOC105561575,_partial_[Vollenhovia_emeryi]
2220 O_BomoSK1199_3prime_partial:A_BomoSK_comp3987_c0_seq1
372bp
 PREDICTED:_cytoplasmic_dynein_1_light_intermediate_chain_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005868 C cytoplasmic dynein complex
GO:0005874 C microtubule
GO:0006810 P transport
GO:0007018 P microtubule-based movement
GO:0008152 P metabolic process
GO:0030286 C dynein complex
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