Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
2011	O_BomoSK11810_5prime_partial:A_BomoSK_comp12741_c0_seq1 1051bp	Bomo_Chr25	PREDICTED:_uncharacterized_protein_LOC105841398_isoform_X3_[Bombyx_mori]	GO:0000118 C histone deacetylase complex GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0005667 C transcription regulator complex GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0007275 P multicellular organism development GO:0007283 P spermatogenesis GO:0008134 F transcription factor binding GO:0030154 P cell differentiation GO:0044212 F transcription cis-regulatory region binding GO:0046872 F metal ion binding
2012	O_BomoSK11811_complete:A_BomoSK_comp12741_c0_seq1 124bp	Bomo_Chr25
2013	O_BomoSK11812_3prime_partial:A_BomoSK_comp12741_c0_seq1 109bp	Bomo_Chr25	PREDICTED:_CD209_antigen-like_protein_E_[Cricetulus_griseus]
2014	O_BomoSK11813_5prime_partial:A_BomoSK_comp12741_c0_seq3 1000bp	Bomo_Chr25	PREDICTED:_uncharacterized_protein_LOC105841398_isoform_X3_[Bombyx_mori]	GO:0000118 C histone deacetylase complex GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0005667 C transcription regulator complex GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0007275 P multicellular organism development GO:0007283 P spermatogenesis GO:0008134 F transcription factor binding GO:0030154 P cell differentiation GO:0044212 F transcription cis-regulatory region binding GO:0046872 F metal ion binding
2015	O_BomoSK11814_complete:A_BomoSK_comp12741_c0_seq3 124bp	Bomo_Chr25
2016	O_BomoSK11815_3prime_partial:A_BomoSK_comp12741_c0_seq3 109bp	Bomo_Chr25	PREDICTED:_CD209_antigen-like_protein_E_[Cricetulus_griseus]
2017	O_BomoSK11816_5prime_partial:A_BomoSK_comp12741_c0_seq4 1035bp	Bomo_Chr25	PREDICTED:_uncharacterized_protein_LOC105841398_isoform_X1_[Bombyx_mori]	GO:0000118 C histone deacetylase complex GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0005667 C transcription regulator complex GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0007275 P multicellular organism development GO:0007283 P spermatogenesis GO:0008134 F transcription factor binding GO:0030154 P cell differentiation GO:0044212 F transcription cis-regulatory region binding GO:0046872 F metal ion binding
2018	O_BomoSK11817_complete:A_BomoSK_comp12741_c0_seq4 124bp	Bomo_Chr25
2019	O_BomoSK11818_5prime_partial:A_BomoSK_comp12741_c0_seq5 1086bp	Bomo_Chr25	PREDICTED:_uncharacterized_protein_LOC105841398_isoform_X1_[Bombyx_mori]	GO:0000118 C histone deacetylase complex GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0005667 C transcription regulator complex GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0007275 P multicellular organism development GO:0007283 P spermatogenesis GO:0008134 F transcription factor binding GO:0030154 P cell differentiation GO:0044212 F transcription cis-regulatory region binding GO:0046872 F metal ion binding
2020	O_BomoSK11819_complete:A_BomoSK_comp12741_c0_seq5 124bp	Bomo_Chr25
2021	O_BomoSK1181_5prime_partial:A_BomoSK_comp3973_c0_seq1 388bp	Bomo_Chr24	hypothetical_protein_[Curvibacter_lanceolatus]
2022	O_BomoSK11820_3prime_partial:A_BomoSK_comp12742_c0_seq1 847bp	Bomo_Chr4	PREDICTED:_myosin-VIIa_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003774 F cytoskeletal motor activity GO:0003779 F actin binding GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005856 C cytoskeleton GO:0007605 P sensory perception of sound GO:0008152 P metabolic process GO:0008407 P chaeta morphogenesis GO:0016459 C myosin complex GO:0030048 P actin filament-based movement GO:0030898 F microfilament motor activity GO:0032027 F myosin light chain binding GO:0035317 P imaginal disc-derived wing hair organization GO:0048800 P antennal morphogenesis
2023	O_BomoSK11821_complete:A_BomoSK_comp12743_c0_seq1 138bp	Bomo_Chr15	U7_snRNA-associated_Sm-like_protein_LSm10_[Operophtera_brumata]	GO:0003723 F RNA binding GO:0005634 C nucleus GO:0005683 C U7 snRNP GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0015030 C Cajal body GO:0017069 F snRNA binding GO:0030529 C ribonucleoprotein complex GO:0071208 F histone pre-mRNA DCP binding GO:0071209 F U7 snRNA binding GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
2024	O_BomoSK11822_complete:A_BomoSK_comp12743_c0_seq2 129bp	Bomo_Chr15	hypothetical_protein_KGM_04997_[Danaus_plexippus]	GO:0003723 F RNA binding GO:0003735 F structural constituent of ribosome GO:0005737 C cytoplasm GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0006412 P translation GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0022625 C cytosolic large ribosomal subunit GO:0031305 C integral component of mitochondrial inner membrane GO:0032981 P mitochondrial respiratory chain complex I assembly GO:0033617 P mitochondrial cytochrome c oxidase assembly
2025	O_BomoSK11823_complete:A_BomoSK_comp12743_c0_seq3 157bp	Bomo_Chr15	U7_snRNA-associated_Sm-like_protein_LSm10_[Operophtera_brumata]	GO:0003723 F RNA binding GO:0005634 C nucleus GO:0005683 C U7 snRNP GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0015030 C Cajal body GO:0017069 F snRNA binding GO:0030529 C ribonucleoprotein complex GO:0071208 F histone pre-mRNA DCP binding GO:0071209 F U7 snRNA binding GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
2026	O_BomoSK11824_complete:A_BomoSK_comp12745_c0_seq1 371bp	Bomo_Scaf335	hypothetical_protein_KGM_11086_[Danaus_plexippus]	GO:0005215 F transporter activity GO:0006810 P transport GO:0016020 C membrane GO:0016021 C integral component of membrane
2027	O_BomoSK11825_complete:A_BomoSK_comp12745_c0_seq1 181bp	Bomo_Scaf335
2028	O_BomoSK11826_complete:A_BomoSK_comp12745_c0_seq2 363bp	Bomo_Chr11	hypothetical_protein_KGM_11086_[Danaus_plexippus]	GO:0005215 F transporter activity GO:0006810 P transport GO:0016020 C membrane GO:0016021 C integral component of membrane
2029	O_BomoSK11827_complete:A_BomoSK_comp12745_c0_seq2 181bp	Bomo_Chr11
2030	O_BomoSK11828_complete:A_BomoSK_comp12745_c0_seq3 410bp	Bomo_Chr11	PREDICTED:_transmembrane_protein_184B_isoform_X1_[Papilio_xuthus]	GO:0005215 F transporter activity GO:0006810 P transport GO:0016020 C membrane GO:0016021 C integral component of membrane
2031	O_BomoSK11829_complete:A_BomoSK_comp12745_c0_seq3 250bp	Bomo_Chr11
2032	O_BomoSK1182_complete:A_BomoSK_comp3974_c0_seq1 948bp	Bomo_Chr20	PREDICTED:_isoleucine--tRNA_ligase,_mitochondrial_isoform_X1_[Papilio_xuthus]	GO:0000166 F nucleotide binding GO:0002161 F aminoacyl-tRNA editing activity GO:0004812 F aminoacyl-tRNA ligase activity GO:0004822 F isoleucine-tRNA ligase activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005739 C mitochondrion GO:0005759 C mitochondrial matrix GO:0006412 P translation GO:0006418 P tRNA aminoacylation for protein translation GO:0006428 P isoleucyl-tRNA aminoacylation GO:0006450 P regulation of translational fidelity GO:0016874 F ligase activity
2033	O_BomoSK11830_5prime_partial:A_BomoSK_comp12749_c0_seq1 188bp	Bomo_Chr14	PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101744503_[Bombyx_mori]
2034	O_BomoSK11831_5prime_partial:A_BomoSK_comp12749_c0_seq1 103bp	Bomo_Chr14	DNA-binding_protein_[Streptomyces_sp._NRRL_S-146]
2035	O_BomoSK11832_3prime_partial:A_BomoSK_comp12750_c1_seq1 110bp	Bomo_Chr12	uncharacterized_LOC106124386_precursor_[Papilio_xuthus]
2036	O_BomoSK11833_3prime_partial:A_BomoSK_comp12750_c1_seq2 227bp	Bomo_Chr12	uncharacterized_LOC106124386_precursor_[Papilio_xuthus]	GO:0004872 F signaling receptor activity GO:0005102 F signaling receptor binding GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0005887 C integral component of plasma membrane GO:0005913 C adherens junction GO:0007155 P cell adhesion GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules GO:0007420 P brain development GO:0008037 P cell recognition GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0030054 C cell junction GO:0030424 C axon GO:0032809 C neuronal cell body membrane GO:0042803 F protein homodimerization activity GO:0042995 C cell projection GO:0045202 C synapse GO:0050839 F cell adhesion molecule binding
2037	O_BomoSK11834_complete:A_BomoSK_comp12750_c1_seq2 120bp	Bomo_Chr12	PREDICTED:_uncharacterized_protein_LOC103419365_[Malus_domestica]
2038	O_BomoSK11835_complete:A_BomoSK_comp12751_c0_seq1 382bp	Bomo_Chr9	PREDICTED:_NEDD8-activating_enzyme_E1_catalytic_subunit_[Papilio_xuthus]	GO:0000166 F nucleotide binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005829 C cytosol GO:0008641 F ubiquitin-like modifier activating enzyme activity GO:0016874 F ligase activity GO:0016881 F acid-amino acid ligase activity GO:0019781 F NEDD8 activating enzyme activity GO:0045116 P protein neddylation
2039	O_BomoSK11836_complete:A_BomoSK_comp12751_c0_seq2 449bp	Bomo_Chr9	PREDICTED:_NEDD8-activating_enzyme_E1_catalytic_subunit_[Amyelois_transitella]	GO:0000166 F nucleotide binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005829 C cytosol GO:0008641 F ubiquitin-like modifier activating enzyme activity GO:0016874 F ligase activity GO:0016881 F acid-amino acid ligase activity GO:0019781 F NEDD8 activating enzyme activity GO:0045116 P protein neddylation
2040	O_BomoSK11837_complete:A_BomoSK_comp12751_c0_seq3 382bp	Bomo_Chr9	PREDICTED:_NEDD8-activating_enzyme_E1_catalytic_subunit_[Papilio_xuthus]	GO:0000166 F nucleotide binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005829 C cytosol GO:0008641 F ubiquitin-like modifier activating enzyme activity GO:0016874 F ligase activity GO:0016881 F acid-amino acid ligase activity GO:0019781 F NEDD8 activating enzyme activity GO:0045116 P protein neddylation