Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
1981	O_BomoSK11784_complete:A_BomoSK_comp12733_c0_seq1 102bp	Bomo_Chr11
1982	O_BomoSK11785_internal:A_BomoSK_comp12734_c0_seq1 912bp	Bomo_Chr13	PREDICTED:_transient_receptor_potential-gamma_protein_[Bombyx_mori]	GO:0005216 F ion channel activity GO:0005261 F cation channel activity GO:0005262 F calcium channel activity GO:0005515 F protein binding GO:0005887 C integral component of plasma membrane GO:0006810 P transport GO:0006811 P ion transport GO:0006812 P cation transport GO:0006816 P calcium ion transport GO:0006828 P manganese ion transport GO:0007601 P visual perception GO:0007628 P adult walking behavior GO:0009416 P response to light stimulus GO:0015279 F store-operated calcium channel activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016028 C rhabdomere GO:0022833 F mechanosensitive ion channel activity GO:0034703 C cation channel complex GO:0043025 C neuronal cell body GO:0050884 P neuromuscular process controlling posture GO:0050896 P response to stimulus GO:0050908 P detection of light stimulus involved in visual perception GO:0051480 P regulation of cytosolic calcium ion concentration GO:0055085 P transmembrane transport GO:0070588 P calcium ion transmembrane transport GO:1990635 C proximal dendrite
1983	O_BomoSK11786_5prime_partial:A_BomoSK_comp12734_c0_seq1 430bp	Bomo_Chr13	PREDICTED:_39S_ribosomal_protein_L12,_mitochondrial_[Oreochromis_niloticus]
1984	O_BomoSK11787_3prime_partial:A_BomoSK_comp12734_c0_seq2 499bp	Bomo_Chr13	PREDICTED:_transient_receptor_potential-gamma_protein_[Bombyx_mori]	GO:0005216 F ion channel activity GO:0005261 F cation channel activity GO:0005262 F calcium channel activity GO:0005515 F protein binding GO:0005887 C integral component of plasma membrane GO:0006810 P transport GO:0006811 P ion transport GO:0006812 P cation transport GO:0006816 P calcium ion transport GO:0006828 P manganese ion transport GO:0007601 P visual perception GO:0007628 P adult walking behavior GO:0009416 P response to light stimulus GO:0015279 F store-operated calcium channel activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016028 C rhabdomere GO:0022833 F mechanosensitive ion channel activity GO:0034703 C cation channel complex GO:0043025 C neuronal cell body GO:0050884 P neuromuscular process controlling posture GO:0050896 P response to stimulus GO:0050908 P detection of light stimulus involved in visual perception GO:0051480 P regulation of cytosolic calcium ion concentration GO:0055085 P transmembrane transport GO:0070588 P calcium ion transmembrane transport GO:1990635 C proximal dendrite
1985	O_BomoSK11788_5prime_partial:A_BomoSK_comp12734_c0_seq2 482bp	Bomo_Chr13	PREDICTED:_transient_receptor_potential-gamma_protein_[Bombyx_mori]	GO:0005216 F ion channel activity GO:0005261 F cation channel activity GO:0005262 F calcium channel activity GO:0005515 F protein binding GO:0005887 C integral component of plasma membrane GO:0006810 P transport GO:0006811 P ion transport GO:0006812 P cation transport GO:0006816 P calcium ion transport GO:0006828 P manganese ion transport GO:0007601 P visual perception GO:0007628 P adult walking behavior GO:0009416 P response to light stimulus GO:0015279 F store-operated calcium channel activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016028 C rhabdomere GO:0022833 F mechanosensitive ion channel activity GO:0034703 C cation channel complex GO:0043025 C neuronal cell body GO:0050884 P neuromuscular process controlling posture GO:0050896 P response to stimulus GO:0050908 P detection of light stimulus involved in visual perception GO:0051480 P regulation of cytosolic calcium ion concentration GO:0055085 P transmembrane transport GO:0070588 P calcium ion transmembrane transport GO:1990635 C proximal dendrite
1986	O_BomoSK11789_5prime_partial:A_BomoSK_comp12734_c0_seq2 430bp	Bomo_Chr13	PREDICTED:_39S_ribosomal_protein_L12,_mitochondrial_[Oreochromis_niloticus]
1987	O_BomoSK1178_complete:A_BomoSK_comp3972_c0_seq2 143bp	Bomo_Chr24	PREDICTED:_multiple_inositol_polyphosphate_phosphatase_1-like_[Papilio_polytes]
1988	O_BomoSK11790_internal:A_BomoSK_comp12734_c0_seq3 1018bp	Bomo_Chr13	PREDICTED:_transient_receptor_potential-gamma_protein_[Bombyx_mori]	GO:0005216 F ion channel activity GO:0005261 F cation channel activity GO:0005262 F calcium channel activity GO:0005515 F protein binding GO:0005887 C integral component of plasma membrane GO:0006810 P transport GO:0006811 P ion transport GO:0006812 P cation transport GO:0006816 P calcium ion transport GO:0006828 P manganese ion transport GO:0007601 P visual perception GO:0007628 P adult walking behavior GO:0009416 P response to light stimulus GO:0015279 F store-operated calcium channel activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016028 C rhabdomere GO:0022833 F mechanosensitive ion channel activity GO:0034703 C cation channel complex GO:0043025 C neuronal cell body GO:0050884 P neuromuscular process controlling posture GO:0050896 P response to stimulus GO:0050908 P detection of light stimulus involved in visual perception GO:0051480 P regulation of cytosolic calcium ion concentration GO:0055085 P transmembrane transport GO:0070588 P calcium ion transmembrane transport GO:1990635 C proximal dendrite
1989	O_BomoSK11791_5prime_partial:A_BomoSK_comp12734_c0_seq3 430bp	Bomo_Chr13	PREDICTED:_39S_ribosomal_protein_L12,_mitochondrial_[Oreochromis_niloticus]
1990	O_BomoSK11792_complete:A_BomoSK_comp12734_c0_seq3 131bp	Bomo_Chr13
1991	O_BomoSK11793_complete:A_BomoSK_comp12734_c0_seq3 122bp	Bomo_Chr13
1992	O_BomoSK11794_5prime_partial:A_BomoSK_comp12734_c0_seq4 588bp	Bomo_Chr13	PREDICTED:_transient_receptor_potential-gamma_protein_[Bombyx_mori]	GO:0005216 F ion channel activity GO:0005261 F cation channel activity GO:0005262 F calcium channel activity GO:0005515 F protein binding GO:0005887 C integral component of plasma membrane GO:0006810 P transport GO:0006811 P ion transport GO:0006812 P cation transport GO:0006816 P calcium ion transport GO:0006828 P manganese ion transport GO:0007601 P visual perception GO:0007628 P adult walking behavior GO:0009416 P response to light stimulus GO:0015279 F store-operated calcium channel activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016028 C rhabdomere GO:0022833 F mechanosensitive ion channel activity GO:0034703 C cation channel complex GO:0043025 C neuronal cell body GO:0050884 P neuromuscular process controlling posture GO:0050896 P response to stimulus GO:0050908 P detection of light stimulus involved in visual perception GO:0051480 P regulation of cytosolic calcium ion concentration GO:0055085 P transmembrane transport GO:0070588 P calcium ion transmembrane transport GO:1990635 C proximal dendrite
1993	O_BomoSK11795_3prime_partial:A_BomoSK_comp12734_c0_seq4 499bp	Bomo_Chr13	PREDICTED:_transient_receptor_potential-gamma_protein_[Bombyx_mori]	GO:0005216 F ion channel activity GO:0005261 F cation channel activity GO:0005262 F calcium channel activity GO:0005515 F protein binding GO:0005887 C integral component of plasma membrane GO:0006810 P transport GO:0006811 P ion transport GO:0006812 P cation transport GO:0006816 P calcium ion transport GO:0006828 P manganese ion transport GO:0007601 P visual perception GO:0007628 P adult walking behavior GO:0009416 P response to light stimulus GO:0015279 F store-operated calcium channel activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016028 C rhabdomere GO:0022833 F mechanosensitive ion channel activity GO:0034703 C cation channel complex GO:0043025 C neuronal cell body GO:0050884 P neuromuscular process controlling posture GO:0050896 P response to stimulus GO:0050908 P detection of light stimulus involved in visual perception GO:0051480 P regulation of cytosolic calcium ion concentration GO:0055085 P transmembrane transport GO:0070588 P calcium ion transmembrane transport GO:1990635 C proximal dendrite
1994	O_BomoSK11796_5prime_partial:A_BomoSK_comp12734_c0_seq4 430bp	Bomo_Chr13	PREDICTED:_39S_ribosomal_protein_L12,_mitochondrial_[Oreochromis_niloticus]
1995	O_BomoSK11797_complete:A_BomoSK_comp12734_c0_seq4 131bp	Bomo_Chr13
1996	O_BomoSK11798_complete:A_BomoSK_comp12734_c0_seq4 122bp	Bomo_Chr13
1997	O_BomoSK11799_5prime_partial:A_BomoSK_comp12735_c0_seq1 995bp	Bomo_Chr4	PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]	GO:0003964 F RNA-directed DNA polymerase activity GO:0006278 P RNA-dependent DNA biosynthetic process GO:0008152 P metabolic process GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity
1998	O_BomoSK1179_complete:A_BomoSK_comp3972_c0_seq2 113bp	Bomo_Chr24	hypothetical_protein_[Lactobacillus_reuteri]
1999	O_BomoSK117_internal:A_BomoSK_comp407_c0_seq1 113bp	Bomo_Chr1	S33901_reverse_transcriptase_-_silkworm_transposon_Pao
2000	O_BomoSK11800_complete:A_BomoSK_comp12735_c0_seq2 608bp	Bomo_Scaf013	PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]	GO:0003964 F RNA-directed DNA polymerase activity GO:0005575 C cellular_component GO:0006278 P RNA-dependent DNA biosynthetic process GO:0006313 P transposition, DNA-mediated GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity
2001	O_BomoSK11801_5prime_partial:A_BomoSK_comp12735_c0_seq3 448bp	Bomo_Chr26	PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]	GO:0003964 F RNA-directed DNA polymerase activity GO:0006278 P RNA-dependent DNA biosynthetic process GO:0008152 P metabolic process GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity
2002	O_BomoSK11802_complete:A_BomoSK_comp12736_c0_seq1 764bp	Bomo_Chr16	PREDICTED:_GAS2-like_protein_1_[Papilio_polytes]	GO:0001578 P microtubule bundle formation GO:0001725 C stress fiber GO:0005737 C cytoplasm GO:0005856 C cytoskeleton GO:0005874 C microtubule GO:0007026 P negative regulation of microtubule depolymerization GO:0007050 P regulation of cell cycle GO:0008017 F microtubule binding GO:0008093 F cytoskeletal anchor activity GO:0009267 P cellular response to starvation GO:0010629 P negative regulation of gene expression GO:0030308 P negative regulation of cell growth GO:0045647 P negative regulation of erythrocyte differentiation GO:0046966 F thyroid hormone receptor binding GO:0051726 P regulation of cell cycle GO:0097067 P cellular response to thyroid hormone stimulus
2003	O_BomoSK11803_complete:A_BomoSK_comp12736_c0_seq1 122bp	Bomo_Chr16	filamentation_induced_by_cAMP_protein_fic_[Leptotrichia_buccalis]
2004	O_BomoSK11804_complete:A_BomoSK_comp12736_c0_seq1 103bp	Bomo_Chr16	exonuclease_sbcCD_subunit_D_[Bacillus_sp._B-jedd]
2005	O_BomoSK11805_complete:A_BomoSK_comp12737_c2_seq1 241bp	Bomo_Chr24	glutathione_S-transferase_omega_3_[Bombyx_mori]	GO:0004364 F glutathione transferase activity GO:0004734 F pyrimidodiazepine synthase activity GO:0005737 C cytoplasm GO:0006726 P eye pigment biosynthetic process GO:0006728 P pteridine biosynthetic process GO:0006749 P glutathione metabolic process GO:0008152 P metabolic process GO:0016491 F oxidoreductase activity GO:0016782 F transferase activity, transferring sulphur-containing groups GO:0042803 F protein homodimerization activity GO:0045174 F glutathione dehydrogenase (ascorbate) activity GO:0055114 P obsolete oxidation-reduction process GO:0098869 P cellular oxidant detoxification
2006	O_BomoSK11806_complete:A_BomoSK_comp12739_c0_seq1 653bp	Bomo_Chr28	PREDICTED:_WD_repeat-containing_protein_48_homolog_isoform_X2_[Bombyx_mori]
2007	O_BomoSK11807_complete:A_BomoSK_comp12740_c0_seq1 421bp	Bomo_Chr12	PREDICTED:_bifunctional_ATP-dependent_dihydroxyacetone_kinase/FAD-AMP_lyase_(cyclizing)-like,_partial_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003824 F catalytic activity GO:0004371 F glycerone kinase activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005829 C cytosol GO:0006071 P glycerol metabolic process GO:0008152 P metabolic process GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0016829 F lyase activity GO:0034012 F FAD-AMP lyase (cyclizing) activity GO:0039534 P negative regulation of MDA-5 signaling pathway GO:0044262 P cellular carbohydrate metabolic process GO:0045087 P innate immune response GO:0045088 P regulation of innate immune response GO:0046835 P carbohydrate phosphorylation GO:0046872 F metal ion binding GO:0050354 F triokinase activity GO:0061624 P fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate GO:0070062 C extracellular exosome
2008	O_BomoSK11808_complete:A_BomoSK_comp12740_c0_seq1 136bp	Bomo_Chr12	PREDICTED:_bifunctional_ATP-dependent_dihydroxyacetone_kinase/FAD-AMP_lyase_(cyclizing)-like,_partial_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003824 F catalytic activity GO:0004371 F glycerone kinase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0006071 P glycerol metabolic process GO:0008152 P metabolic process GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0016829 F lyase activity GO:0034012 F FAD-AMP lyase (cyclizing) activity GO:0039534 P negative regulation of MDA-5 signaling pathway GO:0044262 P cellular carbohydrate metabolic process GO:0045088 P regulation of innate immune response GO:0046835 P carbohydrate phosphorylation GO:0046872 F metal ion binding GO:0050354 F triokinase activity GO:0070062 C extracellular exosome
2009	O_BomoSK11809_complete:A_BomoSK_comp12740_c0_seq1 135bp	Bomo_Chr12	Uncharacterised_protein_[Mycobacterium_abscessus]
2010	O_BomoSK1180_3prime_partial:A_BomoSK_comp3973_c0_seq1 556bp	Bomo_Chr24	PREDICTED:_zinc_finger_protein_454-like_[Amyelois_transitella]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0046872 F metal ion binding