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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1171 O_BomoSK11054_complete:A_BomoSK_comp12509_c1_seq1
336bp
 PREDICTED:_dolichyl-phosphate_beta-glucosyltransferase_[Papilio_polytes]
GO:0004169 F dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0004581 F dolichyl-phosphate beta-glucosyltransferase activity
GO:0004582 F dolichyl-phosphate beta-D-mannosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0006493 P protein O-linked glycosylation
GO:0006506 P GPI anchor biosynthetic process
GO:0007009 P plasma membrane organization
GO:0007029 P endoplasmic reticulum organization
GO:0007030 P Golgi organization
GO:0007379 P segment specification
GO:0007509 P mesoderm migration involved in gastrulation
GO:0009880 P embryonic pattern specification
GO:0009953 P dorsal/ventral pattern formation
GO:0010004 P gastrulation involving germ band extension
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0019348 P dolichol metabolic process
GO:0019991 P septate junction assembly
GO:0035269 P protein O-linked mannosylation
GO:0040003 P chitin-based cuticle development
1172 O_BomoSK11055_complete:A_BomoSK_comp12510_c0_seq1
119bp
 envelope_glycoprotein,_partial_[Human_immunodeficiency_virus_1]
1173 O_BomoSK11056_complete:A_BomoSK_comp12510_c0_seq2
419bp
 PREDICTED:_protein_yellow-like_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0042438 P melanin biosynthetic process
GO:0060179 P male mating behavior
1174 O_BomoSK11057_complete:A_BomoSK_comp12510_c0_seq3
376bp
 PREDICTED:_protein_yellow-like_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0042438 P melanin biosynthetic process
GO:0060179 P male mating behavior
1175 O_BomoSK11058_5prime_partial:A_BomoSK_comp12512_c0_seq1
616bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_RFWD2-like_[Plutella_xylostella]
GO:0000139 C Golgi membrane
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005925 C focal adhesion
GO:0008270 F zinc ion binding
GO:0010212 P response to ionizing radiation
GO:0016567 P protein ubiquitination
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
1176 O_BomoSK11059_5prime_partial:A_BomoSK_comp12512_c0_seq1
138bp
1177 O_BomoSK1105_internal:A_BomoSK_comp3887_c0_seq2
358bp
 PREDICTED:_golgi-specific_brefeldin_A-resistance_guanine_nucleotide_exchange_factor_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0002263 P cell activation involved in immune response
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0005788 C endoplasmic reticulum lumen
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005801 C cis-Golgi network
GO:0005802 C trans-Golgi network
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0006895 P Golgi to endosome transport
GO:0007030 P Golgi organization
GO:0007346 P regulation of mitotic cell cycle
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0030593 P neutrophil chemotaxis
GO:0031252 C cell leading edge
GO:0032012 P regulation of ARF protein signal transduction
GO:0034067 P protein localization to Golgi apparatus
GO:0042147 P retrograde transport, endosome to Golgi
GO:0043547 P positive regulation of GTPase activity
GO:0048205 P COPI coating of Golgi vesicle
GO:0061162 P establishment of monopolar cell polarity
GO:0070973 P protein localization to endoplasmic reticulum exit site
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
GO:0090166 P Golgi disassembly
GO:0097111 P endoplasmic reticulum-Golgi intermediate compartment organization
GO:1903409 P reactive oxygen species biosynthetic process
GO:1903420 P protein localization to endoplasmic reticulum tubular network
GO:2000008 P regulation of protein localization to cell surface
1178 O_BomoSK11060_5prime_partial:A_BomoSK_comp12513_c0_seq1
119bp
1179 O_BomoSK11061_3prime_partial:A_BomoSK_comp12513_c0_seq1
115bp
 CRAL-TRIO_domain-containing_protein,_partial_[Manduca_sexta]
1180 O_BomoSK11062_5prime_partial:A_BomoSK_comp12513_c0_seq2
194bp
 CRAL-TRIO_domain-containing_protein,_partial_[Manduca_sexta]
GO:0005215 F transporter activity
GO:0005622 C intracellular anatomical structure
GO:0006810 P transport
GO:0016020 C membrane
1181 O_BomoSK11063_5prime_partial:A_BomoSK_comp12513_c0_seq3
119bp
1182 O_BomoSK11064_3prime_partial:A_BomoSK_comp12513_c0_seq3
116bp
 CRAL-TRIO_domain-containing_protein,_partial_[Manduca_sexta]
1183 O_BomoSK11065_5prime_partial:A_BomoSK_comp12513_c0_seq4
194bp
 CRAL-TRIO_domain-containing_protein,_partial_[Manduca_sexta]
GO:0005215 F transporter activity
GO:0005622 C intracellular anatomical structure
GO:0006810 P transport
GO:0016020 C membrane
1184 O_BomoSK11066_complete:A_BomoSK_comp12514_c0_seq1
928bp
 PREDICTED:_dorsal-ventral_patterning_protein_Sog_isoform_X1_[Bombyx_mori]
GO:0005518 F collagen binding
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0007313 P maternal specification of dorsal/ventral axis, oocyte, soma encoded
GO:0007354 P zygotic determination of anterior/posterior axis, embryo
GO:0007362 P terminal region determination
GO:0007378 P amnioserosa formation
GO:0007398 P ectoderm development
GO:0008083 F growth factor activity
GO:0008293 P torso signaling pathway
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030509 P BMP signaling pathway
GO:0030510 P regulation of BMP signaling pathway
GO:0030511 P positive regulation of transforming growth factor beta receptor signaling pathway
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0035271 P ring gland development
GO:0040008 P regulation of growth
GO:0061328 P posterior Malpighian tubule development
1185 O_BomoSK11067_complete:A_BomoSK_comp12514_c0_seq1
106bp
 PREDICTED:_acid-sensing_ion_channel_2-like_[Acropora_digitifera]
1186 O_BomoSK11068_complete:A_BomoSK_comp12515_c0_seq1
1115bp
 PREDICTED:_uncharacterized_protein_LOC106129437_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000775 C chromosome, centromeric region
GO:0001741 C XY body
GO:0001934 P positive regulation of protein phosphorylation
GO:0002039 F p53 binding
GO:0003714 F transcription corepressor activity
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005874 C microtubule
GO:0005938 C cell cortex
GO:0006334 P nucleosome assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007257 P obsolete activation of JUN kinase activity
GO:0008134 F transcription factor binding
GO:0008625 P extrinsic apoptotic signaling pathway via death domain receptors
GO:0010038 P response to metal ion
GO:0010832 P negative regulation of myotube differentiation
GO:0016032 P viral process
GO:0016568 P chromatin organization
GO:0016605 C PML body
GO:0019899 F enzyme binding
GO:0019901 F protein kinase binding
GO:0030295 F protein kinase activator activity
GO:0030521 P androgen receptor signaling pathway
GO:0030578 P PML body organization
GO:0031072 F heat shock protein binding
GO:0031396 P regulation of protein ubiquitination
GO:0031625 F ubiquitin protein ligase binding
GO:0033129 P positive regulation of histone phosphorylation
GO:0042393 F histone binding
GO:0042803 F protein homodimerization activity
GO:0043005 C neuron projection
GO:0043065 P positive regulation of apoptotic process
GO:0044297 C cell body
GO:0045860 P positive regulation of protein kinase activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0047485 F protein N-terminus binding
GO:0050681 F androgen receptor binding
GO:0070603 C SWI/SNF superfamily-type complex
GO:0071356 P cellular response to tumor necrosis factor
GO:0071454 P cellular response to anoxia
GO:1901216 P positive regulation of neuron death
1187 O_BomoSK11069_complete:A_BomoSK_comp12515_c0_seq1
150bp
1188 O_BomoSK1106_5prime_partial:A_BomoSK_comp3887_c0_seq2
225bp
1189 O_BomoSK11070_5prime_partial:A_BomoSK_comp12516_c0_seq1
343bp
 PREDICTED:_uncharacterized_protein_LOC103570555_[Microplitis_demolitor]
1190 O_BomoSK11071_complete:A_BomoSK_comp12516_c0_seq2
100bp
 PREDICTED:_uncharacterized_protein_LOC100570071_[Acyrthosiphon_pisum]
1191 O_BomoSK11072_complete:A_BomoSK_comp12517_c0_seq1
251bp
 PREDICTED:_5'-methylthioadenosine_phosphorylase_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
1192 O_BomoSK11073_complete:A_BomoSK_comp12518_c0_seq1
524bp
 PREDICTED:_rab_proteins_geranylgeranyltransferase_component_A_1_[Amyelois_transitella]
GO:0000922 C spindle pole
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005818 C aster
GO:0005856 C cytoskeleton
GO:0005968 C Rab-protein geranylgeranyltransferase complex
GO:0006886 P intracellular protein transport
GO:0007049 P cell cycle
GO:0007269 P neurotransmitter secretion
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0016491 F oxidoreductase activity
GO:0017137 F small GTPase binding
GO:0018344 P protein geranylgeranylation
GO:0019233 P sensory perception of pain
GO:0043547 P positive regulation of GTPase activity
GO:0048471 C perinuclear region of cytoplasm
GO:0055114 P obsolete oxidation-reduction process
1193 O_BomoSK11074_complete:A_BomoSK_comp12519_c0_seq2
191bp
 inosine_triphosphatase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005737 C cytoplasm
GO:0009117 P nucleotide metabolic process
GO:0009143 P nucleoside triphosphate catabolic process
GO:0009204 P deoxyribonucleoside triphosphate catabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0047429 F nucleoside-triphosphate diphosphatase activity
1194 O_BomoSK11075_complete:A_BomoSK_comp12520_c0_seq1
282bp
 PREDICTED:_E3_ubiquitin-protein_ligase_SIAH1-like_[Amyelois_transitella]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0008022 F protein C-terminus binding
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030154 P cell differentiation
GO:0030163 P protein catabolic process
GO:0030877 C beta-catenin destruction complex
GO:0031648 P protein destabilization
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0042802 F identical protein binding
GO:0043065 P positive regulation of apoptotic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0051402 P neuron apoptotic process
GO:0061630 F ubiquitin protein ligase activity
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
1195 O_BomoSK11076_complete:A_BomoSK_comp12521_c0_seq1
381bp
 PREDICTED:_la_protein_homolog_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0030529 C ribonucleoprotein complex
1196 O_BomoSK11077_5prime_partial:A_BomoSK_comp12521_c0_seq1
209bp
 peptidase_family_M50_[Burkholderia_sp._JPY347]
1197 O_BomoSK11078_complete:A_BomoSK_comp12521_c0_seq2
381bp
 PREDICTED:_la_protein_homolog_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0030529 C ribonucleoprotein complex
1198 O_BomoSK11079_5prime_partial:A_BomoSK_comp12521_c0_seq2
209bp
 peptidase_family_M50_[Burkholderia_sp._JPY347]
1199 O_BomoSK1107_3prime_partial:A_BomoSK_comp3887_c0_seq2
121bp
 PREDICTED:_probable_protein_phosphatase_2C_35_[Musa_acuminata_subsp._malaccensis]
1200 O_BomoSK11080_5prime_partial:A_BomoSK_comp12522_c0_seq1
310bp
 PREDICTED:_dystroglycan_isoform_X4_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0042383 C sarcolemma
GO:0043236 F laminin binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
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